RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 SLC5A2P31639 672 aa11.13□□□□□ -0.63
PTCH1-203ENST00000375274 DNASE1L1P49184 302 aa11.13□□□□□ -0.63
PTCH1-203ENST00000375274 MEF2AQ02078 507 aaPredicted RBP11.13□□□□□ -0.63
PTCH1-203ENST00000375274 TMEM115Q12893 351 aaPredicted RBP11.13□□□□□ -0.63
PTCH1-203ENST00000375274 CRHR2Q13324 411 aa11.13□□□□□ -0.63
PTCH1-203ENST00000375274 LETMD1Q6P1Q0 360 aa11.13□□□□□ -0.63
PTCH1-203ENST00000375274 PRR23CQ6ZRP0 262 aa11.13□□□□□ -0.63
PTCH1-203ENST00000375274 GET4Q7L5D6 327 aaPredicted RBP11.13□□□□□ -0.63
PTCH1-203ENST00000375274 CARM1Q86X55 608 aa11.13□□□□□ -0.63
PTCH1-203ENST00000375274 ZNF676Q8N7Q3 588 aa11.13□□□□□ -0.63
PTCH1-203ENST00000375274 SIPA1Q96FS4 1042 aa11.13□□□□□ -0.63
PTCH1-203ENST00000375274 RIPOR3Q96MK2 946 aa11.13□□□□□ -0.63
PTCH1-203ENST00000375274 MCCC1Q96RQ3 725 aaPredicted RBP11.13□□□□□ -0.63
PTCH1-203ENST00000375274 CD180Q99467 661 aa11.13□□□□□ -0.63
PTCH1-203ENST00000375274 PIP5K1AQ99755 562 aa11.13□□□□□ -0.63
PTCH1-203ENST00000375274 TMEM175Q9BSA9 504 aa11.13□□□□□ -0.63
PTCH1-203ENST00000375274 WDR26Q9H7D7 661 aa11.13□□□□□ -0.63
PTCH1-203ENST00000375274 B4GAT1O43505 415 aa11.12□□□□□ -0.63
PTCH1-203ENST00000375274 RAB36O95755 333 aa11.12□□□□□ -0.63
PTCH1-203ENST00000375274 JUPP14923 745 aa11.12□□□□□ -0.63
PTCH1-203ENST00000375274 F8A1P23610 371 aa11.12□□□□□ -0.63
PTCH1-203ENST00000375274 RPL10P27635 214 aaKnown RBP11.12□□□□□ -0.63
PTCH1-203ENST00000375274 ARF5P84085 180 aa11.12□□□□□ -0.63
PTCH1-203ENST00000375274 ZNF534Q76KX8 674 aa11.12□□□□□ -0.63
PTCH1-203ENST00000375274 GAB3Q8WWW8 586 aa11.12□□□□□ -0.63
PTCH1-203ENST00000375274 TMEM246Q9BRR3 403 aa11.12□□□□□ -0.63
PTCH1-203ENST00000375274 BRD7Q9NPI1 651 aa11.12□□□□□ -0.63
PTCH1-203ENST00000375274 ENAMQ9NRM1 1142 aa11.12□□□□□ -0.63
PTCH1-203ENST00000375274 C2orf92A0A1B0GVN3 265 aa11.12□□□□□ -0.63
PTCH1-203ENST00000375274 J3QLW9 94 aa11.12□□□□□ -0.63
PTCH1-203ENST00000375274 PPP6CO00743 305 aa11.12□□□□□ -0.63
PTCH1-203ENST00000375274 AOC2O75106 756 aa11.12□□□□□ -0.63
PTCH1-203ENST00000375274 ITGA10O75578 1167 aa11.12□□□□□ -0.63
PTCH1-203ENST00000375274 GIMD1P0DJR0 217 aa11.12□□□□□ -0.63
PTCH1-203ENST00000375274 ZNF19P17023 458 aa11.12□□□□□ -0.63
PTCH1-203ENST00000375274 CRISP1P54107 249 aa11.12□□□□□ -0.63
PTCH1-203ENST00000375274 SLC36A3Q495N2 470 aa11.12□□□□□ -0.63
PTCH1-203ENST00000375274 KLHL24Q6TFL4 600 aa11.12□□□□□ -0.63
PTCH1-203ENST00000375274 SLC36A4Q6YBV0 504 aa11.12□□□□□ -0.63
PTCH1-203ENST00000375274 ZNF783Q6ZMS7 281 aa11.12□□□□□ -0.63
PTCH1-203ENST00000375274 C3orf30Q96M34 536 aa11.12□□□□□ -0.63
PTCH1-203ENST00000375274 FUZQ9BT04 418 aa11.12□□□□□ -0.63
PTCH1-203ENST00000375274 VAPAQ9P0L0 249 aa11.12□□□□□ -0.63
PTCH1-203ENST00000375274 KNL1Q8NG31 2342 aa11.12□□□□□ -0.63
PTCH1-203ENST00000375274 A0A0X1KG70 313 aa11.12□□□□□ -0.63
PTCH1-203ENST00000375274 NDUFS4O43181 175 aa11.12□□□□□ -0.63
PTCH1-203ENST00000375274 MAGEA8P43361 318 aa11.12□□□□□ -0.63
PTCH1-203ENST00000375274 RAB8AP61006 207 aa11.12□□□□□ -0.63
PTCH1-203ENST00000375274 DOC2AQ14183 400 aa11.12□□□□□ -0.63
PTCH1-203ENST00000375274 SWI5Q1ZZU3 235 aa11.12□□□□□ -0.63
PTCH1-203ENST00000375274 KDELC1Q6UW63 502 aa11.12□□□□□ -0.63
PTCH1-203ENST00000375274 SNX29P2Q8IUI4 249 aa11.12□□□□□ -0.63
PTCH1-203ENST00000375274 MMAAQ8IVH4 418 aaKnown RBP11.12□□□□□ -0.63
PTCH1-203ENST00000375274 CEP76Q8TAP6 659 aa11.12□□□□□ -0.63
PTCH1-203ENST00000375274 BPIFB1Q8TDL5 484 aa11.12□□□□□ -0.63
PTCH1-203ENST00000375274 ZNF431Q8TF32 576 aaPredicted RBP11.12□□□□□ -0.63
PTCH1-203ENST00000375274 HAVCR1Q96D42 359 aa11.12□□□□□ -0.63
PTCH1-203ENST00000375274 PCDHB14Q9Y5E9 798 aa11.12□□□□□ -0.63
PTCH1-203ENST00000375274 APOL3O95236 402 aa11.11□□□□□ -0.63
PTCH1-203ENST00000375274 STOMP27105 288 aa11.11□□□□□ -0.63
PTCH1-203ENST00000375274 ACTR1BP42025 376 aa11.11□□□□□ -0.63
PTCH1-203ENST00000375274 ACTR1AP61163 376 aa11.11□□□□□ -0.63
PTCH1-203ENST00000375274 CDK5R2Q13319 367 aa11.11□□□□□ -0.63
PTCH1-203ENST00000375274 TRAM2Q15035 370 aa11.11□□□□□ -0.63
PTCH1-203ENST00000375274 SLC8B1Q6J4K2 584 aa11.11□□□□□ -0.63
PTCH1-203ENST00000375274 SLC27A4Q6P1M0 643 aa11.11□□□□□ -0.63
PTCH1-203ENST00000375274 PIWIL3Q7Z3Z3 882 aaKnown RBP11.11□□□□□ -0.63
PTCH1-203ENST00000375274 SERINC5Q86VE9 423 aa11.11□□□□□ -0.63
PTCH1-203ENST00000375274 DCUN1D3Q8IWE4 304 aa11.11□□□□□ -0.63
PTCH1-203ENST00000375274 OR56A1Q8NGH5 318 aa11.11□□□□□ -0.63
PTCH1-203ENST00000375274 MZB1Q8WU39 189 aa11.11□□□□□ -0.63
PTCH1-203ENST00000375274 SLC22A18Q96BI1 424 aa11.11□□□□□ -0.63
PTCH1-203ENST00000375274 BCL7BQ9BQE9 202 aa11.11□□□□□ -0.63
PTCH1-203ENST00000375274 SMURF1Q9HCE7 757 aa11.11□□□□□ -0.63
PTCH1-203ENST00000375274 EXOSC1Q9Y3B2 195 aaKnown RBP11.11□□□□□ -0.63
PTCH1-203ENST00000375274 MED31Q9Y3C7 131 aa11.11□□□□□ -0.63
PTCH1-203ENST00000375274 CLCA3PQ9Y6N3 262 aa11.11□□□□□ -0.63
PTCH1-203ENST00000375274 LAMB4A4D0S4 1761 aa11.11□□□□□ -0.63
PTCH1-203ENST00000375274 A0A1W2PRQ8 180 aa11.11□□□□□ -0.63
PTCH1-203ENST00000375274 GMFGO60234 142 aa11.11□□□□□ -0.63
PTCH1-203ENST00000375274 LDOC1O95751 146 aaPredicted RBP11.11□□□□□ -0.63
PTCH1-203ENST00000375274 HK1P19367 917 aa11.11□□□□□ -0.63
PTCH1-203ENST00000375274 DCKP27707 260 aa11.11□□□□□ -0.63
PTCH1-203ENST00000375274 PRDX3P30048 256 aaKnown RBP11.11□□□□□ -0.63
PTCH1-203ENST00000375274 GNALP38405 381 aa11.11□□□□□ -0.63
PTCH1-203ENST00000375274 HS3ST5Q8IZT8 346 aa11.11□□□□□ -0.63
PTCH1-203ENST00000375274 NEIL3Q8TAT5 605 aa11.11□□□□□ -0.63
PTCH1-203ENST00000375274 GPR62Q9BZJ7 368 aa11.11□□□□□ -0.63
PTCH1-203ENST00000375274 DPEP2Q9H4A9 486 aa11.11□□□□□ -0.63
PTCH1-203ENST00000375274 ERVK13-1Q9NX77 482 aa11.11□□□□□ -0.63
PTCH1-203ENST00000375274 SDK1Q7Z5N4 2213 aa11.11□□□□□ -0.63
PTCH1-203ENST00000375274 C7orf72A4D263 438 aa11.11□□□□□ -0.63
PTCH1-203ENST00000375274 TSPAN6O43657 245 aa11.11□□□□□ -0.63
PTCH1-203ENST00000375274 STATHP02808 62 aa11.11□□□□□ -0.63
PTCH1-203ENST00000375274 LCKP06239 509 aa11.11□□□□□ -0.63
PTCH1-203ENST00000375274 MATN1P21941 496 aa11.11□□□□□ -0.63
PTCH1-203ENST00000375274 UQCRC2P22695 453 aa11.11□□□□□ -0.63
PTCH1-203ENST00000375274 BMP8BP34820 402 aa11.11□□□□□ -0.63
PTCH1-203ENST00000375274 IGFALSP35858 605 aa11.11□□□□□ -0.63
PTCH1-203ENST00000375274 TSPAN5P62079 268 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms