RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 ZNF425Q6IV72 752 aa17.17■□□□□ 0.34
HLA-DQB1-201ENST00000374943 Q6ZSR6 202 aa17.17■□□□□ 0.34
HLA-DQB1-201ENST00000374943 AMIGO1Q86WK6 493 aa17.17■□□□□ 0.34
HLA-DQB1-201ENST00000374943 ZCCHC7Q8N3Z6 543 aaKnown RBP17.17■□□□□ 0.34
HLA-DQB1-201ENST00000374943 LCN9Q8WX39 176 aa17.17■□□□□ 0.34
HLA-DQB1-201ENST00000374943 TMBIM1Q969X1 311 aa17.17■□□□□ 0.34
HLA-DQB1-201ENST00000374943 SLC6A16Q9GZN6 736 aa17.17■□□□□ 0.34
HLA-DQB1-201ENST00000374943 C6orf106Q9H6K1 298 aaPredicted RBP17.17■□□□□ 0.34
HLA-DQB1-201ENST00000374943 SPHK1Q9NYA1 384 aa17.17■□□□□ 0.34
HLA-DQB1-201ENST00000374943 TAS2R9Q9NYW1 312 aa17.17■□□□□ 0.34
HLA-DQB1-201ENST00000374943 RPS6KA6Q9UK32 745 aa17.17■□□□□ 0.34
HLA-DQB1-201ENST00000374943 A0A1W2PRB8 838 aa17.16■□□□□ 0.34
HLA-DQB1-201ENST00000374943 LRIT2A6NDA9 550 aa17.16■□□□□ 0.34
HLA-DQB1-201ENST00000374943 RTCAO00442 366 aaKnown RBP17.16■□□□□ 0.34
HLA-DQB1-201ENST00000374943 RASGRP1O95267 797 aa17.16■□□□□ 0.34
HLA-DQB1-201ENST00000374943 KDELR2P33947 212 aa17.16■□□□□ 0.34
HLA-DQB1-201ENST00000374943 RPS9P46781 194 aaKnown RBP17.16■□□□□ 0.34
HLA-DQB1-201ENST00000374943 MYBPC1Q00872 1141 aa17.16■□□□□ 0.34
HLA-DQB1-201ENST00000374943 FADDQ13158 208 aa17.16■□□□□ 0.34
HLA-DQB1-201ENST00000374943 LRRC32Q14392 662 aa17.16■□□□□ 0.34
HLA-DQB1-201ENST00000374943 ZNF852Q6ZMS4 543 aa17.16■□□□□ 0.34
HLA-DQB1-201ENST00000374943 RD3Q7Z3Z2 195 aa17.16■□□□□ 0.34
HLA-DQB1-201ENST00000374943 NRROSQ86YC3 692 aa17.16■□□□□ 0.34
HLA-DQB1-201ENST00000374943 FBXL6Q8N531 539 aa17.16■□□□□ 0.34
HLA-DQB1-201ENST00000374943 OR52N2Q8NGI0 321 aa17.16■□□□□ 0.34
HLA-DQB1-201ENST00000374943 CCL4L1Q8NHW4 92 aa17.16■□□□□ 0.34
HLA-DQB1-201ENST00000374943 PNPT1Q8TCS8 783 aaKnown RBP17.16■□□□□ 0.34
HLA-DQB1-201ENST00000374943 SLC35A5Q9BS91 424 aa17.16■□□□□ 0.34
HLA-DQB1-201ENST00000374943 ADI1Q9BV57 179 aa17.16■□□□□ 0.34
HLA-DQB1-201ENST00000374943 TRIM4Q9C037 500 aa17.16■□□□□ 0.34
HLA-DQB1-201ENST00000374943 AICDAQ9GZX7 198 aa17.16■□□□□ 0.34
HLA-DQB1-201ENST00000374943 RAD21L1Q9H4I0 556 aa17.16■□□□□ 0.34
HLA-DQB1-201ENST00000374943 GPR27Q9NS67 375 aa17.16■□□□□ 0.34
HLA-DQB1-201ENST00000374943 SMPD3Q9NY59 655 aaPredicted RBP17.16■□□□□ 0.34
HLA-DQB1-201ENST00000374943 SNX7Q9UNH6 387 aa17.16■□□□□ 0.34
HLA-DQB1-201ENST00000374943 EYSQ5T1H1 3165 aa17.16■□□□□ 0.34
HLA-DQB1-201ENST00000374943 A0A0A6YYD5 115 aa17.16■□□□□ 0.34
HLA-DQB1-201ENST00000374943 HAT1O14929 419 aa17.16■□□□□ 0.34
HLA-DQB1-201ENST00000374943 HPRP00739 348 aa17.16■□□□□ 0.34
HLA-DQB1-201ENST00000374943 CST1P01037 141 aa17.16■□□□□ 0.34
HLA-DQB1-201ENST00000374943 SEMG1P04279 462 aa17.16■□□□□ 0.34
HLA-DQB1-201ENST00000374943 FOSL2P15408 326 aa17.16■□□□□ 0.34
HLA-DQB1-201ENST00000374943 SLC19A1P41440 591 aa17.16■□□□□ 0.34
HLA-DQB1-201ENST00000374943 MERTKQ12866 999 aa17.16■□□□□ 0.34
HLA-DQB1-201ENST00000374943 GK3PQ14409 553 aa17.16■□□□□ 0.34
HLA-DQB1-201ENST00000374943 TEAD4Q15561 434 aa17.16■□□□□ 0.34
HLA-DQB1-201ENST00000374943 OR4C11Q6IEV9 310 aa17.16■□□□□ 0.34
HLA-DQB1-201ENST00000374943 SLC30A9Q6PML9 568 aa17.16■□□□□ 0.34
HLA-DQB1-201ENST00000374943 CBLL1Q75N03 491 aa17.16■□□□□ 0.34
HLA-DQB1-201ENST00000374943 PLD3Q8IV08 490 aa17.16■□□□□ 0.34
HLA-DQB1-201ENST00000374943 SVOPLQ8N434 492 aa17.16■□□□□ 0.34
HLA-DQB1-201ENST00000374943 FLCNQ8NFG4 579 aa17.16■□□□□ 0.34
HLA-DQB1-201ENST00000374943 OR13H1Q8NG92 308 aa17.16■□□□□ 0.34
HLA-DQB1-201ENST00000374943 ZFPM2Q8WW38 1151 aa17.16■□□□□ 0.34
HLA-DQB1-201ENST00000374943 TBC1D20Q96BZ9 403 aa17.16■□□□□ 0.34
HLA-DQB1-201ENST00000374943 TOE1Q96GM8 510 aaKnown RBP17.16■□□□□ 0.34
HLA-DQB1-201ENST00000374943 DPH2Q9BQC3 489 aaPredicted RBP17.16■□□□□ 0.34
HLA-DQB1-201ENST00000374943 DPH7Q9BTV6 452 aa17.16■□□□□ 0.34
HLA-DQB1-201ENST00000374943 CD320Q9NPF0 282 aa17.16■□□□□ 0.34
HLA-DQB1-201ENST00000374943 PCDHGB5Q9Y5G0 923 aa17.16■□□□□ 0.34
HLA-DQB1-201ENST00000374943 TMPRSS11DO60235 418 aa17.15■□□□□ 0.34
HLA-DQB1-201ENST00000374943 TNFRSF21O75509 655 aa17.15■□□□□ 0.34
HLA-DQB1-201ENST00000374943 FRKP42685 505 aaPredicted RBP17.15■□□□□ 0.34
HLA-DQB1-201ENST00000374943 RBBP4Q09028 425 aa17.15■□□□□ 0.34
HLA-DQB1-201ENST00000374943 HYAL2Q12891 473 aa17.15■□□□□ 0.34
HLA-DQB1-201ENST00000374943 DAG1Q14118 895 aa17.15■□□□□ 0.34
HLA-DQB1-201ENST00000374943 MYBPC3Q14896 1274 aa17.15■□□□□ 0.34
HLA-DQB1-201ENST00000374943 SLC36A3Q495N2 470 aa17.15■□□□□ 0.34
HLA-DQB1-201ENST00000374943 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.15■□□□□ 0.34
HLA-DQB1-201ENST00000374943 LRRC23Q53EV4 343 aaPredicted RBP17.15■□□□□ 0.34
HLA-DQB1-201ENST00000374943 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.15■□□□□ 0.34
HLA-DQB1-201ENST00000374943 TMEM214Q6NUQ4 689 aaKnown RBP17.15■□□□□ 0.34
HLA-DQB1-201ENST00000374943 EIF3MQ7L2H7 374 aaKnown RBP17.15■□□□□ 0.34
HLA-DQB1-201ENST00000374943 ADHFE1Q8IWW8 467 aa17.15■□□□□ 0.34
HLA-DQB1-201ENST00000374943 MMP21Q8N119 569 aa17.15■□□□□ 0.34
HLA-DQB1-201ENST00000374943 SLC22A18ASQ8N1D0 253 aa17.15■□□□□ 0.34
HLA-DQB1-201ENST00000374943 MFSD9Q8NBP5 474 aa17.15■□□□□ 0.34
HLA-DQB1-201ENST00000374943 C11orf65Q8NCR3 313 aa17.15■□□□□ 0.34
HLA-DQB1-201ENST00000374943 GPBAR1Q8TDU6 330 aa17.15■□□□□ 0.34
HLA-DQB1-201ENST00000374943 SLC22A18Q96BI1 424 aa17.15■□□□□ 0.34
HLA-DQB1-201ENST00000374943 GPATCH2Q9NW75 528 aa17.15■□□□□ 0.34
HLA-DQB1-201ENST00000374943 WSB2Q9NYS7 404 aaPredicted RBP17.15■□□□□ 0.34
HLA-DQB1-201ENST00000374943 UTS2RQ9UKP6 389 aa17.15■□□□□ 0.34
HLA-DQB1-201ENST00000374943 CYP8B1Q9UNU6 501 aa17.15■□□□□ 0.34
HLA-DQB1-201ENST00000374943 PCDHGA4Q9Y5G9 962 aa17.15■□□□□ 0.34
HLA-DQB1-201ENST00000374943 GOLGA4Q13439 2230 aaKnown RBP17.15■□□□□ 0.34
HLA-DQB1-201ENST00000374943 KRT75O95678 551 aa17.14■□□□□ 0.33
HLA-DQB1-201ENST00000374943 TNFP01375 233 aa17.14■□□□□ 0.33
HLA-DQB1-201ENST00000374943 SMIM18P0DKX4 95 aa17.14■□□□□ 0.33
HLA-DQB1-201ENST00000374943 MYF6P23409 242 aa17.14■□□□□ 0.33
HLA-DQB1-201ENST00000374943 ALDH3A2P51648 485 aa17.14■□□□□ 0.33
HLA-DQB1-201ENST00000374943 ARSFP54793 590 aa17.14■□□□□ 0.33
HLA-DQB1-201ENST00000374943 VAC14Q08AM6 782 aa17.14■□□□□ 0.33
HLA-DQB1-201ENST00000374943 ILF3Q12906 894 aaKnown RBP eCLIP17.14■□□□□ 0.33
HLA-DQB1-201ENST00000374943 BIRC2Q13490 618 aa17.14■□□□□ 0.33
HLA-DQB1-201ENST00000374943 KIR2DS3Q14952 304 aa17.14■□□□□ 0.33
HLA-DQB1-201ENST00000374943 KIAA1614Q5VZ46 1190 aa17.14■□□□□ 0.33
HLA-DQB1-201ENST00000374943 TBPL2Q6SJ96 375 aa17.14■□□□□ 0.33
HLA-DQB1-201ENST00000374943 PAQR7Q86WK9 346 aa17.14■□□□□ 0.33
HLA-DQB1-201ENST00000374943 CLEC4FQ8N1N0 589 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms