RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 OTOGQ6ZRI0 2925 aa14.97□□□□□ -0.01
CKS1B-202ENST00000368436 FAM95CA0A1B0GW59 222 aa14.96□□□□□ -0.01
CKS1B-202ENST00000368436 NPEPPSL1A6NEC2 478 aa14.96□□□□□ -0.01
CKS1B-202ENST00000368436 A8MUA0 341 aa14.96□□□□□ -0.01
CKS1B-202ENST00000368436 C19orf84I3L1E1 186 aa14.96□□□□□ -0.01
CKS1B-202ENST00000368436 FCHO1O14526 889 aa14.96□□□□□ -0.01
CKS1B-202ENST00000368436 ADAM10O14672 748 aa14.96□□□□□ -0.01
CKS1B-202ENST00000368436 TP73O15350 636 aa14.96□□□□□ -0.01
CKS1B-202ENST00000368436 ZNHIT1O43257 154 aa14.96□□□□□ -0.01
CKS1B-202ENST00000368436 ZSCAN12O43309 604 aa14.96□□□□□ -0.01
CKS1B-202ENST00000368436 C1GALT1C1LP0DN25 315 aa14.96□□□□□ -0.01
CKS1B-202ENST00000368436 ABOP16442 354 aa14.96□□□□□ -0.01
CKS1B-202ENST00000368436 GNAZP19086 355 aa14.96□□□□□ -0.01
CKS1B-202ENST00000368436 SLC6A12P48065 614 aa14.96□□□□□ -0.01
CKS1B-202ENST00000368436 HSF1Q00613 529 aa14.96□□□□□ -0.01
CKS1B-202ENST00000368436 MGAT5Q09328 741 aa14.96□□□□□ -0.01
CKS1B-202ENST00000368436 SLCO4C1Q6ZQN7 724 aa14.96□□□□□ -0.01
CKS1B-202ENST00000368436 B3GNT7Q8NFL0 401 aa14.96□□□□□ -0.01
CKS1B-202ENST00000368436 AGAP11Q8TF27 550 aa14.96□□□□□ -0.01
CKS1B-202ENST00000368436 ANKRD49Q8WVL7 239 aa14.96□□□□□ -0.01
CKS1B-202ENST00000368436 TMEM125Q96AQ2 219 aa14.96□□□□□ -0.01
CKS1B-202ENST00000368436 DMRTA2Q96SC8 542 aa14.96□□□□□ -0.01
CKS1B-202ENST00000368436 MCMBPQ9BTE3 642 aa14.96□□□□□ -0.01
CKS1B-202ENST00000368436 NPLQ9BXD5 320 aaPredicted RBP14.96□□□□□ -0.01
CKS1B-202ENST00000368436 KLF13Q9Y2Y9 288 aaPredicted RBP14.96□□□□□ -0.01
CKS1B-202ENST00000368436 CLDN16Q9Y5I7 305 aa14.96□□□□□ -0.01
CKS1B-202ENST00000368436 E9PLN8 166 aa14.95□□□□□ -0.02
CKS1B-202ENST00000368436 PRRG2O14669 202 aa14.95□□□□□ -0.02
CKS1B-202ENST00000368436 H2AFYO75367 372 aaKnown RBP14.95□□□□□ -0.02
CKS1B-202ENST00000368436 SAT1P21673 171 aa14.95□□□□□ -0.02
CKS1B-202ENST00000368436 KIR3DL1P43629 444 aa14.95□□□□□ -0.02
CKS1B-202ENST00000368436 CLCN2P51788 898 aa14.95□□□□□ -0.02
CKS1B-202ENST00000368436 GPR143P51810 404 aa14.95□□□□□ -0.02
CKS1B-202ENST00000368436 ARL4CP56559 192 aa14.95□□□□□ -0.02
CKS1B-202ENST00000368436 STXBP1P61764 594 aaKnown RBP14.95□□□□□ -0.02
CKS1B-202ENST00000368436 BTN3A2P78410 334 aa14.95□□□□□ -0.02
CKS1B-202ENST00000368436 CBLBQ13191 982 aa14.95□□□□□ -0.02
CKS1B-202ENST00000368436 RUNX2Q13950 521 aa14.95□□□□□ -0.02
CKS1B-202ENST00000368436 ZNF460Q14592 562 aa14.95□□□□□ -0.02
CKS1B-202ENST00000368436 NCCRP1Q6ZVX7 275 aaPredicted RBP14.95□□□□□ -0.02
CKS1B-202ENST00000368436 ANKMY2Q8IV38 441 aa14.95□□□□□ -0.02
CKS1B-202ENST00000368436 SULF2Q8IWU5 870 aa14.95□□□□□ -0.02
CKS1B-202ENST00000368436 SCUBE1Q8IWY4 988 aa14.95□□□□□ -0.02
CKS1B-202ENST00000368436 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.95□□□□□ -0.02
CKS1B-202ENST00000368436 C16orf52Q8NHV5 167 aa14.95□□□□□ -0.02
CKS1B-202ENST00000368436 GAL3ST3Q96A11 431 aa14.95□□□□□ -0.02
CKS1B-202ENST00000368436 RHBDF1Q96CC6 855 aa14.95□□□□□ -0.02
CKS1B-202ENST00000368436 MS4A6EQ96DS6 147 aa14.95□□□□□ -0.02
CKS1B-202ENST00000368436 SEC16BQ96JE7 1060 aa14.95□□□□□ -0.02
CKS1B-202ENST00000368436 PDLIM2Q96JY6 352 aa14.95□□□□□ -0.02
CKS1B-202ENST00000368436 RUNDC3BQ96NL0 473 aa14.95□□□□□ -0.02
CKS1B-202ENST00000368436 EGFL8Q99944 293 aa14.95□□□□□ -0.02
CKS1B-202ENST00000368436 VKORC1Q9BQB6 163 aa14.95□□□□□ -0.02
CKS1B-202ENST00000368436 NT5DC2Q9H857 520 aa14.95□□□□□ -0.02
CKS1B-202ENST00000368436 POPDC3Q9HBV1 291 aa14.95□□□□□ -0.02
CKS1B-202ENST00000368436 ZNF223Q9UK11 482 aaPredicted RBP14.95□□□□□ -0.02
CKS1B-202ENST00000368436 CSMD2Q7Z408 3487 aa14.94□□□□□ -0.02
CKS1B-202ENST00000368436 TRBV11-1A0A0K0K1C0 115 aa14.94□□□□□ -0.02
CKS1B-202ENST00000368436 LRIT2A6NDA9 550 aa14.94□□□□□ -0.02
CKS1B-202ENST00000368436 E7ESA3 106 aa14.94□□□□□ -0.02
CKS1B-202ENST00000368436 KLRC4-KLRK1H3BQV0 150 aa14.94□□□□□ -0.02
CKS1B-202ENST00000368436 TGFBR3LH3BV60 316 aa14.94□□□□□ -0.02
CKS1B-202ENST00000368436 MYO1DO94832 1006 aa14.94□□□□□ -0.02
CKS1B-202ENST00000368436 WDR47O94967 919 aa14.94□□□□□ -0.02
CKS1B-202ENST00000368436 SEC31AO94979 1220 aaKnown RBP14.94□□□□□ -0.02
CKS1B-202ENST00000368436 GSTM2P28161 218 aa14.94□□□□□ -0.02
CKS1B-202ENST00000368436 HNRNPH1P31943 449 aaKnown RBP14.94□□□□□ -0.02
CKS1B-202ENST00000368436 PTGER1P34995 402 aa14.94□□□□□ -0.02
CKS1B-202ENST00000368436 GDF5P43026 501 aa14.94□□□□□ -0.02
CKS1B-202ENST00000368436 MEOX1P50221 254 aa14.94□□□□□ -0.02
CKS1B-202ENST00000368436 HSD17B7P56937 341 aa14.94□□□□□ -0.02
CKS1B-202ENST00000368436 DR1Q01658 176 aa14.94□□□□□ -0.02
CKS1B-202ENST00000368436 TSNQ15631 228 aaKnown RBP14.94□□□□□ -0.02
CKS1B-202ENST00000368436 C18orf21Q32NC0 220 aaPredicted RBP14.94□□□□□ -0.02
CKS1B-202ENST00000368436 TMIGD1Q6UXZ0 262 aa14.94□□□□□ -0.02
CKS1B-202ENST00000368436 ADAMTSL2Q86TH1 951 aa14.94□□□□□ -0.02
CKS1B-202ENST00000368436 CREG2Q8IUH2 290 aa14.94□□□□□ -0.02
CKS1B-202ENST00000368436 CEP97Q8IW35 865 aa14.94□□□□□ -0.02
CKS1B-202ENST00000368436 KLHL7Q8IXQ5 586 aa14.94□□□□□ -0.02
CKS1B-202ENST00000368436 ACBD4Q8NC06 268 aa14.94□□□□□ -0.02
CKS1B-202ENST00000368436 TTLQ8NG68 377 aa14.94□□□□□ -0.02
CKS1B-202ENST00000368436 VMP1Q96GC9 406 aa14.94□□□□□ -0.02
CKS1B-202ENST00000368436 FAR2Q96K12 515 aa14.94□□□□□ -0.02
CKS1B-202ENST00000368436 QRFPRQ96P65 431 aa14.94□□□□□ -0.02
CKS1B-202ENST00000368436 CTNNAL1Q9UBT7 734 aa14.94□□□□□ -0.02
CKS1B-202ENST00000368436 PEX1O43933 1283 aa14.93□□□□□ -0.02
CKS1B-202ENST00000368436 ITGA10O75578 1167 aa14.93□□□□□ -0.02
CKS1B-202ENST00000368436 CLEC3AO75596 197 aa14.93□□□□□ -0.02
CKS1B-202ENST00000368436 WISP3O95389 354 aaPredicted RBP14.93□□□□□ -0.02
CKS1B-202ENST00000368436 TBX6O95947 436 aaPredicted RBP14.93□□□□□ -0.02
CKS1B-202ENST00000368436 GGT5P36269 586 aa14.93□□□□□ -0.02
CKS1B-202ENST00000368436 HNRNPFP52597 415 aaKnown RBP14.93□□□□□ -0.02
CKS1B-202ENST00000368436 RAB38P57729 211 aa14.93□□□□□ -0.02
CKS1B-202ENST00000368436 PDIA2Q13087 525 aaKnown RBP14.93□□□□□ -0.02
CKS1B-202ENST00000368436 SLBPQ14493 270 aaKnown RBP eCLIP14.93□□□□□ -0.02
CKS1B-202ENST00000368436 FASTKD3Q14CZ7 662 aaKnown RBP14.93□□□□□ -0.02
CKS1B-202ENST00000368436 ADPRMQ3LIE5 342 aa14.93□□□□□ -0.02
CKS1B-202ENST00000368436 EID3Q8N140 333 aa14.93□□□□□ -0.02
CKS1B-202ENST00000368436 TMEM52Q8NDY8 209 aa14.93□□□□□ -0.02
CKS1B-202ENST00000368436 FBXO36Q8NEA4 188 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms