RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 FBXL8Q96CD0 374 aa19.69■□□□□ 0.74
CD47-202ENST00000361309 SMIM10Q96HG1 83 aa19.69■□□□□ 0.74
CD47-202ENST00000361309 TRIM54Q9BYV2 358 aa19.69■□□□□ 0.74
CD47-202ENST00000361309 TP63Q9H3D4 680 aaPredicted RBP19.69■□□□□ 0.74
CD47-202ENST00000361309 AKAP6Q13023 2319 aa19.69■□□□□ 0.74
CD47-202ENST00000361309 NIPBLQ6KC79 2804 aaeCLIP19.69■□□□□ 0.74
CD47-202ENST00000361309 NAV3Q8IVL0 2385 aa19.68■□□□□ 0.74
CD47-202ENST00000361309 URADA6NGE7 173 aa19.68■□□□□ 0.74
CD47-202ENST00000361309 USP27XA6NNY8 438 aa19.68■□□□□ 0.74
CD47-202ENST00000361309 FOXO6A8MYZ6 492 aa19.68■□□□□ 0.74
CD47-202ENST00000361309 C4orf51C9J302 202 aa19.68■□□□□ 0.74
CD47-202ENST00000361309 MYO1DO94832 1006 aa19.68■□□□□ 0.74
CD47-202ENST00000361309 TOXO94900 526 aa19.68■□□□□ 0.74
CD47-202ENST00000361309 AHSGP02765 367 aa19.68■□□□□ 0.74
CD47-202ENST00000361309 CD1EP15812 388 aa19.68■□□□□ 0.74
CD47-202ENST00000361309 NR0B1P51843 470 aaKnown RBP19.68■□□□□ 0.74
CD47-202ENST00000361309 IL2P60568 153 aa19.68■□□□□ 0.74
CD47-202ENST00000361309 REEP5Q00765 189 aa19.68■□□□□ 0.74
CD47-202ENST00000361309 ARHGAP11AQ6P4F7 1023 aa19.68■□□□□ 0.74
CD47-202ENST00000361309 CA13Q8N1Q1 262 aa19.68■□□□□ 0.74
CD47-202ENST00000361309 TRPV3Q8NET8 790 aa19.68■□□□□ 0.74
CD47-202ENST00000361309 TRIM58Q8NG06 486 aa19.68■□□□□ 0.74
CD47-202ENST00000361309 ATL1Q8WXF7 558 aa19.68■□□□□ 0.74
CD47-202ENST00000361309 PLSCR2Q9NRY7 297 aa19.68■□□□□ 0.74
CD47-202ENST00000361309 TNFRSF10DQ9UBN6 386 aa19.68■□□□□ 0.74
CD47-202ENST00000361309 ZNF223Q9UK11 482 aaPredicted RBP19.68■□□□□ 0.74
CD47-202ENST00000361309 PGAM1P18669 254 aa19.67■□□□□ 0.74
CD47-202ENST00000361309 MSX1P28360 303 aa19.67■□□□□ 0.74
CD47-202ENST00000361309 PDAP1Q13442 181 aaKnown RBP19.67■□□□□ 0.74
CD47-202ENST00000361309 RBBP5Q15291 538 aaKnown RBP19.67■□□□□ 0.74
CD47-202ENST00000361309 EMC4Q5J8M3 183 aa19.67■□□□□ 0.74
CD47-202ENST00000361309 TOR1AIP1Q5JTV8 583 aa19.67■□□□□ 0.74
CD47-202ENST00000361309 CCDC137Q6PK04 289 aaKnown RBP19.67■□□□□ 0.74
CD47-202ENST00000361309 ZNF662Q6ZS27 426 aa19.67■□□□□ 0.74
CD47-202ENST00000361309 KIAA0408Q6ZU52 694 aa19.67■□□□□ 0.74
CD47-202ENST00000361309 CCDC71Q8IV32 467 aaPredicted RBP19.67■□□□□ 0.74
CD47-202ENST00000361309 DMRTC2Q8IXT2 367 aaPredicted RBP19.67■□□□□ 0.74
CD47-202ENST00000361309 PDLIM2Q96JY6 352 aa19.67■□□□□ 0.74
CD47-202ENST00000361309 AICDAQ9GZX7 198 aa19.67■□□□□ 0.74
CD47-202ENST00000361309 DEFB127Q9H1M4 99 aa19.67■□□□□ 0.74
CD47-202ENST00000361309 PELI2Q9HAT8 420 aa19.67■□□□□ 0.74
CD47-202ENST00000361309 KCNJ16Q9NPI9 418 aa19.67■□□□□ 0.74
CD47-202ENST00000361309 PNO1Q9NRX1 252 aaKnown RBP19.67■□□□□ 0.74
CD47-202ENST00000361309 KCMF1Q9P0J7 381 aa19.67■□□□□ 0.74
CD47-202ENST00000361309 DYRK1BQ9Y463 629 aa19.67■□□□□ 0.74
CD47-202ENST00000361309 DIAPH2O60879 1101 aa19.66■□□□□ 0.74
CD47-202ENST00000361309 ART1P52961 327 aa19.66■□□□□ 0.74
CD47-202ENST00000361309 PMPCAQ10713 525 aa19.66■□□□□ 0.74
CD47-202ENST00000361309 TMPRSS11BQ86T26 416 aa19.66■□□□□ 0.74
CD47-202ENST00000361309 GABPB2Q8TAK5 448 aaPredicted RBP19.66■□□□□ 0.74
CD47-202ENST00000361309 NCLNQ969V3 563 aa19.66■□□□□ 0.74
CD47-202ENST00000361309 VMP1Q96GC9 406 aa19.66■□□□□ 0.74
CD47-202ENST00000361309 MS4A14Q96JA4 679 aa19.66■□□□□ 0.74
CD47-202ENST00000361309 AIF1LQ9BQI0 150 aa19.66■□□□□ 0.74
CD47-202ENST00000361309 ZNF559Q9BR84 538 aa19.66■□□□□ 0.74
CD47-202ENST00000361309 TIMMDC1Q9NPL8 285 aa19.66■□□□□ 0.74
CD47-202ENST00000361309 DEPPQ9NTK1 212 aa19.66■□□□□ 0.74
CD47-202ENST00000361309 SLC17A6Q9P2U8 582 aa19.66■□□□□ 0.74
CD47-202ENST00000361309 IKZF3Q9UKT9 509 aa19.66■□□□□ 0.74
CD47-202ENST00000361309 MMACHCQ9Y4U1 282 aa19.66■□□□□ 0.74
CD47-202ENST00000361309 GOLGA6L6A8MZA4 724 aa19.65■□□□□ 0.74
CD47-202ENST00000361309 PRKNO60260 465 aaPredicted RBP19.65■□□□□ 0.74
CD47-202ENST00000361309 BANF1O75531 89 aa19.65■□□□□ 0.74
CD47-202ENST00000361309 TUBB4AP04350 444 aa19.65■□□□□ 0.74
CD47-202ENST00000361309 SERPINA6P08185 405 aa19.65■□□□□ 0.74
CD47-202ENST00000361309 CCDC175P0C221 793 aa19.65■□□□□ 0.74
CD47-202ENST00000361309 PPP2R1BP30154 601 aa19.65■□□□□ 0.74
CD47-202ENST00000361309 SSR4P51571 173 aa19.65■□□□□ 0.74
CD47-202ENST00000361309 NUP107P57740 925 aa19.65■□□□□ 0.74
CD47-202ENST00000361309 BTN3A2P78410 334 aa19.65■□□□□ 0.74
CD47-202ENST00000361309 TERF2Q15554 542 aa19.65■□□□□ 0.74
CD47-202ENST00000361309 NXPE4Q6UWF7 544 aa19.65■□□□□ 0.74
CD47-202ENST00000361309 C16orf47Q6ZP98 133 aaPredicted RBP19.65■□□□□ 0.74
CD47-202ENST00000361309 TMEM200AQ86VY9 491 aa19.65■□□□□ 0.74
CD47-202ENST00000361309 THOC6Q86W42 341 aaKnown RBP19.65■□□□□ 0.74
CD47-202ENST00000361309 CNTN4Q8IWV2 1026 aa19.65■□□□□ 0.74
CD47-202ENST00000361309 PPIL6Q8IXY8 311 aa19.65■□□□□ 0.74
CD47-202ENST00000361309 CREB3L4Q8TEY5 395 aa19.65■□□□□ 0.74
CD47-202ENST00000361309 SEC16BQ96JE7 1060 aa19.65■□□□□ 0.74
CD47-202ENST00000361309 CCDC77Q9BR77 488 aa19.65■□□□□ 0.74
CD47-202ENST00000361309 LIN28AQ9H9Z2 209 aaKnown RBP19.65■□□□□ 0.74
CD47-202ENST00000361309 ERVK-11Q9UQG0 969 aa19.65■□□□□ 0.74
CD47-202ENST00000361309 YARS2Q9Y2Z4 477 aaKnown RBP19.65■□□□□ 0.74
CD47-202ENST00000361309 PRRC2AP48634 2157 aaKnown RBP19.65■□□□□ 0.74
CD47-202ENST00000361309 ARHGAP21Q5T5U3 1957 aa19.64■□□□□ 0.74
CD47-202ENST00000361309 PINLYPA6NC86 204 aa19.64■□□□□ 0.73
CD47-202ENST00000361309 TGFBR3LH3BV60 316 aa19.64■□□□□ 0.73
CD47-202ENST00000361309 HOXD4P09016 255 aaPredicted RBP19.64■□□□□ 0.73
CD47-202ENST00000361309 ENO2P09104 434 aaPredicted RBP19.64■□□□□ 0.73
CD47-202ENST00000361309 GPR143P51810 404 aa19.64■□□□□ 0.73
CD47-202ENST00000361309 CYP1B1Q16678 543 aa19.64■□□□□ 0.73
CD47-202ENST00000361309 KRTAP21-3Q3LHN1 58 aa19.64■□□□□ 0.73
CD47-202ENST00000361309 HECTD2Q5U5R9 776 aa19.64■□□□□ 0.73
CD47-202ENST00000361309 PAOXQ6QHF9 649 aa19.64■□□□□ 0.73
CD47-202ENST00000361309 SBSNQ6UWP8 590 aa19.64■□□□□ 0.73
CD47-202ENST00000361309 SCUBE1Q8IWY4 988 aa19.64■□□□□ 0.73
CD47-202ENST00000361309 RASGEF1CQ8N431 466 aa19.64■□□□□ 0.73
CD47-202ENST00000361309 GPATCH11Q8N954 259 aa19.64■□□□□ 0.73
CD47-202ENST00000361309 PSD4Q8NDX1 1056 aa19.64■□□□□ 0.73
CD47-202ENST00000361309 PPIEQ9UNP9 301 aaKnown RBP19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms