RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 UBLCP1Q8WVY7 318 aaPredicted RBP14.86□□□□□ -0.03
TSPAN4-201ENST00000346501 MS4A6EQ96DS6 147 aa14.86□□□□□ -0.03
TSPAN4-201ENST00000346501 CMTM7Q96FZ5 175 aa14.86□□□□□ -0.03
TSPAN4-201ENST00000346501 SERINC2Q96SA4 455 aa14.86□□□□□ -0.03
TSPAN4-201ENST00000346501 KLHL31Q9H511 634 aa14.86□□□□□ -0.03
TSPAN4-201ENST00000346501 IPPKQ9H8X2 491 aa14.86□□□□□ -0.03
TSPAN4-201ENST00000346501 PPCSQ9HAB8 311 aa14.86□□□□□ -0.03
TSPAN4-201ENST00000346501 PTGFRNQ9P2B2 879 aa14.86□□□□□ -0.03
TSPAN4-201ENST00000346501 PSMC3IPQ9P2W1 217 aaPredicted RBP14.86□□□□□ -0.03
TSPAN4-201ENST00000346501 NUP210LQ5VU65 1888 aa14.86□□□□□ -0.03
TSPAN4-201ENST00000346501 KLK8O60259 260 aa14.85□□□□□ -0.03
TSPAN4-201ENST00000346501 FAM153BP0C7A2 387 aa14.85□□□□□ -0.03
TSPAN4-201ENST00000346501 SMIM10L1P0DMW3 83 aa14.85□□□□□ -0.03
TSPAN4-201ENST00000346501 MAGEA12P43365 314 aa14.85□□□□□ -0.03
TSPAN4-201ENST00000346501 MLLT10P55197 1068 aa14.85□□□□□ -0.03
TSPAN4-201ENST00000346501 ARG2P78540 354 aa14.85□□□□□ -0.03
TSPAN4-201ENST00000346501 PCDH1Q08174 1060 aa14.85□□□□□ -0.03
TSPAN4-201ENST00000346501 HYAL2Q12891 473 aa14.85□□□□□ -0.03
TSPAN4-201ENST00000346501 PCOLCEQ15113 449 aa14.85□□□□□ -0.03
TSPAN4-201ENST00000346501 TLR1Q15399 786 aa14.85□□□□□ -0.03
TSPAN4-201ENST00000346501 AP5B1Q2VPB7 878 aa14.85□□□□□ -0.03
TSPAN4-201ENST00000346501 FAM153CQ494X1 144 aa14.85□□□□□ -0.03
TSPAN4-201ENST00000346501 SFT2D3Q587I9 215 aa14.85□□□□□ -0.03
TSPAN4-201ENST00000346501 COLEC12Q5KU26 742 aa14.85□□□□□ -0.03
TSPAN4-201ENST00000346501 PLAG1Q6DJT9 500 aa14.85□□□□□ -0.03
TSPAN4-201ENST00000346501 TIFABQ6ZNK6 161 aa14.85□□□□□ -0.03
TSPAN4-201ENST00000346501 QSOX2Q6ZRP7 698 aa14.85□□□□□ -0.03
TSPAN4-201ENST00000346501 LINC00696Q6ZRV3 163 aa14.85□□□□□ -0.03
TSPAN4-201ENST00000346501 LANCL3Q6ZV70 420 aa14.85□□□□□ -0.03
TSPAN4-201ENST00000346501 CYP4X1Q8N118 509 aa14.85□□□□□ -0.03
TSPAN4-201ENST00000346501 PTGR2Q8N8N7 351 aaPredicted RBP14.85□□□□□ -0.03
TSPAN4-201ENST00000346501 C7orf57Q8NEG2 295 aa14.85□□□□□ -0.03
TSPAN4-201ENST00000346501 SUN3Q8TAQ9 357 aa14.85□□□□□ -0.03
TSPAN4-201ENST00000346501 PHF21BQ96EK2 531 aa14.85□□□□□ -0.03
TSPAN4-201ENST00000346501 SMIM10Q96HG1 83 aa14.85□□□□□ -0.03
TSPAN4-201ENST00000346501 CNDP1Q96KN2 507 aa14.85□□□□□ -0.03
TSPAN4-201ENST00000346501 MAGEB10Q96LZ2 347 aaPredicted RBP14.85□□□□□ -0.03
TSPAN4-201ENST00000346501 GPR78Q96P69 363 aa14.85□□□□□ -0.03
TSPAN4-201ENST00000346501 TBCDQ9BTW9 1192 aa14.85□□□□□ -0.03
TSPAN4-201ENST00000346501 PRDM9Q9NQV7 894 aa14.85□□□□□ -0.03
TSPAN4-201ENST00000346501 XPR1Q9UBH6 696 aa14.85□□□□□ -0.03
TSPAN4-201ENST00000346501 ZNF490Q9ULM2 529 aaPredicted RBP14.85□□□□□ -0.03
TSPAN4-201ENST00000346501 MMACHCQ9Y4U1 282 aa14.85□□□□□ -0.03
TSPAN4-201ENST00000346501 TNRC6AQ8NDV7 1962 aaKnown RBP14.85□□□□□ -0.03
TSPAN4-201ENST00000346501 A0A0G2JN53 185 aa14.84□□□□□ -0.03
TSPAN4-201ENST00000346501 STX16-NPEPL1H3BU86 382 aa14.84□□□□□ -0.03
TSPAN4-201ENST00000346501 STX16O14662 325 aa14.84□□□□□ -0.03
TSPAN4-201ENST00000346501 B3GALT4O96024 378 aa14.84□□□□□ -0.03
TSPAN4-201ENST00000346501 EEF1DP29692 281 aaKnown RBP14.84□□□□□ -0.03
TSPAN4-201ENST00000346501 HNRNPH1P31943 449 aaKnown RBP14.84□□□□□ -0.03
TSPAN4-201ENST00000346501 PIK3CBP42338 1070 aa14.84□□□□□ -0.03
TSPAN4-201ENST00000346501 CCNG1P51959 295 aa14.84□□□□□ -0.03
TSPAN4-201ENST00000346501 RAB38P57729 211 aa14.84□□□□□ -0.03
TSPAN4-201ENST00000346501 SNRPNP63162 240 aaKnown RBP14.84□□□□□ -0.03
TSPAN4-201ENST00000346501 FOXK1P85037 733 aa14.84□□□□□ -0.03
TSPAN4-201ENST00000346501 RHAGQ02094 409 aa14.84□□□□□ -0.03
TSPAN4-201ENST00000346501 Q0VFX4 171 aa14.84□□□□□ -0.03
TSPAN4-201ENST00000346501 DDX39BQ13838 428 aaKnown RBP14.84□□□□□ -0.03
TSPAN4-201ENST00000346501 ADPRMQ3LIE5 342 aa14.84□□□□□ -0.03
TSPAN4-201ENST00000346501 TTC19Q6DKK2 380 aaPredicted RBP14.84□□□□□ -0.03
TSPAN4-201ENST00000346501 PAPD4Q6PIY7 484 aaKnown RBP14.84□□□□□ -0.03
TSPAN4-201ENST00000346501 GOLGA7Q7Z5G4 137 aa14.84□□□□□ -0.03
TSPAN4-201ENST00000346501 LAS2Q8IYD9 372 aa14.84□□□□□ -0.03
TSPAN4-201ENST00000346501 CA13Q8N1Q1 262 aa14.84□□□□□ -0.03
TSPAN4-201ENST00000346501 PLD6Q8N2A8 252 aaKnown RBP14.84□□□□□ -0.03
TSPAN4-201ENST00000346501 SIRT6Q8N6T7 355 aa14.84□□□□□ -0.03
TSPAN4-201ENST00000346501 OR7G3Q8NG95 312 aa14.84□□□□□ -0.03
TSPAN4-201ENST00000346501 M1APQ8TC57 530 aa14.84□□□□□ -0.03
TSPAN4-201ENST00000346501 BRIX1Q8TDN6 353 aaKnown RBP14.84□□□□□ -0.03
TSPAN4-201ENST00000346501 ACMSDQ8TDX5 336 aa14.84□□□□□ -0.03
TSPAN4-201ENST00000346501 IMMP1LQ96LU5 166 aa14.84□□□□□ -0.03
TSPAN4-201ENST00000346501 F2RL3Q96RI0 385 aa14.84□□□□□ -0.03
TSPAN4-201ENST00000346501 KCNK13Q9HB14 408 aa14.84□□□□□ -0.03
TSPAN4-201ENST00000346501 LANCL2Q9NS86 450 aa14.84□□□□□ -0.03
TSPAN4-201ENST00000346501 ASB1Q9Y576 335 aa14.84□□□□□ -0.03
TSPAN4-201ENST00000346501 GCN1Q92616 2671 aaKnown RBP14.84□□□□□ -0.03
TSPAN4-201ENST00000346501 CFAP46Q8IYW2 2715 aa14.83□□□□□ -0.04
TSPAN4-201ENST00000346501 IGHV3-20A0A0C4DH32 117 aa14.83□□□□□ -0.04
TSPAN4-201ENST00000346501 A8MUI8 341 aa14.83□□□□□ -0.04
TSPAN4-201ENST00000346501 PYCARD-AS1I3L0S3 204 aa14.83□□□□□ -0.04
TSPAN4-201ENST00000346501 CLDN9O95484 217 aa14.83□□□□□ -0.04
TSPAN4-201ENST00000346501 TGFB1P01137 390 aa14.83□□□□□ -0.04
TSPAN4-201ENST00000346501 EPORP19235 508 aa14.83□□□□□ -0.04
TSPAN4-201ENST00000346501 CD22P20273 847 aa14.83□□□□□ -0.04
TSPAN4-201ENST00000346501 PTX3P26022 381 aaPredicted RBP14.83□□□□□ -0.04
TSPAN4-201ENST00000346501 TNFRSF8P28908 595 aa14.83□□□□□ -0.04
TSPAN4-201ENST00000346501 SSR2P43308 183 aa14.83□□□□□ -0.04
TSPAN4-201ENST00000346501 TSFMP43897 325 aaKnown RBP14.83□□□□□ -0.04
TSPAN4-201ENST00000346501 HSD17B7P56937 341 aa14.83□□□□□ -0.04
TSPAN4-201ENST00000346501 SLC13A2Q13183 592 aa14.83□□□□□ -0.04
TSPAN4-201ENST00000346501 E2F2Q14209 437 aa14.83□□□□□ -0.04
TSPAN4-201ENST00000346501 INPP5JQ15735 1006 aaPredicted RBP14.83□□□□□ -0.04
TSPAN4-201ENST00000346501 C10orf62Q5T681 223 aaPredicted RBP14.83□□□□□ -0.04
TSPAN4-201ENST00000346501 ABHD17CQ6PCB6 329 aa14.83□□□□□ -0.04
TSPAN4-201ENST00000346501 IGFL2Q6UWQ7 119 aa14.83□□□□□ -0.04
TSPAN4-201ENST00000346501 Q6ZS92 163 aa14.83□□□□□ -0.04
TSPAN4-201ENST00000346501 ZNF595Q8IYB9 648 aa14.83□□□□□ -0.04
TSPAN4-201ENST00000346501 SLC5A8Q8N695 610 aa14.83□□□□□ -0.04
TSPAN4-201ENST00000346501 ZNF473Q8WTR7 871 aaKnown RBP14.83□□□□□ -0.04
TSPAN4-201ENST00000346501 RGMAQ96B86 450 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms