RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 DEPDC1Q5TB30 811 aa17.78■□□□□ 0.44
HOXA9-201ENST00000343483 ANGPTL8Q6UXH0 198 aa17.78■□□□□ 0.44
HOXA9-201ENST00000343483 FKBP9P1Q75LS8 142 aa17.78■□□□□ 0.44
HOXA9-201ENST00000343483 ZZZ3Q8IYH5 903 aa17.78■□□□□ 0.44
HOXA9-201ENST00000343483 ALDH16A1Q8IZ83 802 aa17.78■□□□□ 0.44
HOXA9-201ENST00000343483 MMP21Q8N119 569 aa17.78■□□□□ 0.44
HOXA9-201ENST00000343483 DENND6BQ8NEG7 585 aa17.78■□□□□ 0.44
HOXA9-201ENST00000343483 OR2A1Q8NGT9 310 aa17.78■□□□□ 0.44
HOXA9-201ENST00000343483 TSACCQ96A04 125 aaPredicted RBP17.78■□□□□ 0.44
HOXA9-201ENST00000343483 PHF12Q96QT6 1004 aa17.78■□□□□ 0.44
HOXA9-201ENST00000343483 MAGIXQ9H6Y5 334 aa17.78■□□□□ 0.44
HOXA9-201ENST00000343483 MIEF1Q9NQG6 463 aa17.78■□□□□ 0.44
HOXA9-201ENST00000343483 TBC1D29Q9UFV1 150 aa17.78■□□□□ 0.44
HOXA9-201ENST00000343483 IGKV1-8A0A0C4DH67 115 aa17.77■□□□□ 0.44
HOXA9-201ENST00000343483 CCNDBP1O95273 360 aa17.77■□□□□ 0.44
HOXA9-201ENST00000343483 ZNF682O95780 498 aa17.77■□□□□ 0.44
HOXA9-201ENST00000343483 SERPIND1P05546 499 aa17.77■□□□□ 0.44
HOXA9-201ENST00000343483 HOXC4P09017 264 aaPredicted RBP17.77■□□□□ 0.44
HOXA9-201ENST00000343483 AK4P27144 223 aaPredicted RBP17.77■□□□□ 0.44
HOXA9-201ENST00000343483 SLC5A2P31639 672 aa17.77■□□□□ 0.44
HOXA9-201ENST00000343483 CDK9P50750 372 aaKnown RBP17.77■□□□□ 0.44
HOXA9-201ENST00000343483 HBA1P69905 142 aa17.77■□□□□ 0.44
HOXA9-201ENST00000343483 CSNK1G2P78368 415 aa17.77■□□□□ 0.44
HOXA9-201ENST00000343483 LRRC74AQ0VAA2 488 aa17.77■□□□□ 0.44
HOXA9-201ENST00000343483 GPR155Q7Z3F1 870 aa17.77■□□□□ 0.44
HOXA9-201ENST00000343483 GPR141Q7Z602 305 aa17.77■□□□□ 0.44
HOXA9-201ENST00000343483 PGBD3Q8N328 593 aa17.77■□□□□ 0.44
HOXA9-201ENST00000343483 JPH3Q8WXH2 748 aaPredicted RBP17.77■□□□□ 0.44
HOXA9-201ENST00000343483 BMFQ96LC9 184 aa17.77■□□□□ 0.44
HOXA9-201ENST00000343483 WDR92Q96MX6 357 aa17.77■□□□□ 0.44
HOXA9-201ENST00000343483 SEMA3DO95025 777 aa17.76■□□□□ 0.43
HOXA9-201ENST00000343483 C6orf47O95873 294 aa17.76■□□□□ 0.43
HOXA9-201ENST00000343483 SERPINB1P30740 379 aa17.76■□□□□ 0.43
HOXA9-201ENST00000343483 MAPK12P53778 367 aa17.76■□□□□ 0.43
HOXA9-201ENST00000343483 SMAD4Q13485 552 aaKnown RBP17.76■□□□□ 0.43
HOXA9-201ENST00000343483 C16orf72Q14CZ0 275 aa17.76■□□□□ 0.43
HOXA9-201ENST00000343483 CPZQ66K79 652 aa17.76■□□□□ 0.43
HOXA9-201ENST00000343483 IKBIPQ70UQ0 350 aa17.76■□□□□ 0.43
HOXA9-201ENST00000343483 PTOV1Q86YD1 416 aa17.76■□□□□ 0.43
HOXA9-201ENST00000343483 ADHFE1Q8IWW8 467 aa17.76■□□□□ 0.43
HOXA9-201ENST00000343483 SVOPLQ8N434 492 aa17.76■□□□□ 0.43
HOXA9-201ENST00000343483 ADAMTS16Q8TE57 1224 aa17.76■□□□□ 0.43
HOXA9-201ENST00000343483 MUS81Q96NY9 551 aa17.76■□□□□ 0.43
HOXA9-201ENST00000343483 SMURF2Q9HAU4 748 aa17.76■□□□□ 0.43
HOXA9-201ENST00000343483 DDX18Q9NVP1 670 aaKnown RBP17.76■□□□□ 0.43
HOXA9-201ENST00000343483 ZNF282Q9UDV7 671 aaPredicted RBP17.76■□□□□ 0.43
HOXA9-201ENST00000343483 NCOR1O75376 2440 aa17.76■□□□□ 0.43
HOXA9-201ENST00000343483 SHISA7A6NL88 538 aa17.76■□□□□ 0.43
HOXA9-201ENST00000343483 LCMT2O60294 686 aaKnown RBP17.76■□□□□ 0.43
HOXA9-201ENST00000343483 EML2O95834 649 aa17.76■□□□□ 0.43
HOXA9-201ENST00000343483 PPIBP23284 216 aaKnown RBP17.76■□□□□ 0.43
HOXA9-201ENST00000343483 VAC14Q08AM6 782 aa17.76■□□□□ 0.43
HOXA9-201ENST00000343483 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.76■□□□□ 0.43
HOXA9-201ENST00000343483 ERICH5Q6P6B1 374 aa17.76■□□□□ 0.43
HOXA9-201ENST00000343483 GALNT10Q86SR1 603 aa17.76■□□□□ 0.43
HOXA9-201ENST00000343483 ZFP90Q8TF47 636 aa17.76■□□□□ 0.43
HOXA9-201ENST00000343483 POP5Q969H6 163 aaKnown RBP17.76■□□□□ 0.43
HOXA9-201ENST00000343483 ZNF717Q9BY31 904 aaPredicted RBP17.76■□□□□ 0.43
HOXA9-201ENST00000343483 YTHDF1Q9BYJ9 559 aaKnown RBP17.76■□□□□ 0.43
HOXA9-201ENST00000343483 PITHD1Q9GZP4 211 aaPredicted RBP17.76■□□□□ 0.43
HOXA9-201ENST00000343483 NT5DC2Q9H857 520 aa17.76■□□□□ 0.43
HOXA9-201ENST00000343483 MRPS30Q9NP92 439 aaKnown RBP17.76■□□□□ 0.43
HOXA9-201ENST00000343483 CORO2BQ9UQ03 480 aa17.76■□□□□ 0.43
HOXA9-201ENST00000343483 HEBP2Q9Y5Z4 205 aa17.76■□□□□ 0.43
HOXA9-201ENST00000343483 COLEC10Q9Y6Z7 277 aa17.76■□□□□ 0.43
HOXA9-201ENST00000343483 NUDT7P0C024 238 aa17.75■□□□□ 0.43
HOXA9-201ENST00000343483 IL1RNP18510 177 aa17.75■□□□□ 0.43
HOXA9-201ENST00000343483 PCSK6P29122 969 aa17.75■□□□□ 0.43
HOXA9-201ENST00000343483 RGNQ15493 299 aa17.75■□□□□ 0.43
HOXA9-201ENST00000343483 SMAD2Q15796 467 aaKnown RBP17.75■□□□□ 0.43
HOXA9-201ENST00000343483 MPEG1Q2M385 716 aa17.75■□□□□ 0.43
HOXA9-201ENST00000343483 SPESP1Q6UW49 350 aa17.75■□□□□ 0.43
HOXA9-201ENST00000343483 Q6ZS52 159 aa17.75■□□□□ 0.43
HOXA9-201ENST00000343483 PAGE2Q7Z2X7 111 aa17.75■□□□□ 0.43
HOXA9-201ENST00000343483 HS3ST5Q8IZT8 346 aa17.75■□□□□ 0.43
HOXA9-201ENST00000343483 ZCCHC7Q8N3Z6 543 aaKnown RBP17.75■□□□□ 0.43
HOXA9-201ENST00000343483 CCL4L1Q8NHW4 92 aa17.75■□□□□ 0.43
HOXA9-201ENST00000343483 MTERF3Q96E29 417 aa17.75■□□□□ 0.43
HOXA9-201ENST00000343483 PYURFQ96I23 114 aa17.75■□□□□ 0.43
HOXA9-201ENST00000343483 RDH12Q96NR8 316 aa17.75■□□□□ 0.43
HOXA9-201ENST00000343483 OSBPL10Q9BXB5 764 aa17.75■□□□□ 0.43
HOXA9-201ENST00000343483 TOR3AQ9H497 397 aa17.75■□□□□ 0.43
HOXA9-201ENST00000343483 SAMD4AQ9UPU9 718 aaKnown RBP17.75■□□□□ 0.43
HOXA9-201ENST00000343483 BDP1A6H8Y1 2624 aa17.75■□□□□ 0.43
HOXA9-201ENST00000343483 NDUFS4O43181 175 aa17.75■□□□□ 0.43
HOXA9-201ENST00000343483 NOBOXO60393 691 aa17.75■□□□□ 0.43
HOXA9-201ENST00000343483 GPR37L1O60883 481 aa17.75■□□□□ 0.43
HOXA9-201ENST00000343483 TRMUO75648 421 aaKnown RBP17.75■□□□□ 0.43
HOXA9-201ENST00000343483 RASGRP1O95267 797 aa17.75■□□□□ 0.43
HOXA9-201ENST00000343483 SEMA4FO95754 770 aa17.75■□□□□ 0.43
HOXA9-201ENST00000343483 AKT2P31751 481 aa17.75■□□□□ 0.43
HOXA9-201ENST00000343483 BSGP35613 385 aa17.75■□□□□ 0.43
HOXA9-201ENST00000343483 ACTR1BP42025 376 aa17.75■□□□□ 0.43
HOXA9-201ENST00000343483 CASP9P55211 416 aa17.75■□□□□ 0.43
HOXA9-201ENST00000343483 ACTR1AP61163 376 aa17.75■□□□□ 0.43
HOXA9-201ENST00000343483 PRSS53Q2L4Q9 553 aa17.75■□□□□ 0.43
HOXA9-201ENST00000343483 ZBED5Q49AG3 693 aa17.75■□□□□ 0.43
HOXA9-201ENST00000343483 FAM180BQ6P0A1 224 aa17.75■□□□□ 0.43
HOXA9-201ENST00000343483 ADGRF3Q8IZF5 1079 aa17.75■□□□□ 0.43
HOXA9-201ENST00000343483 EID3Q8N140 333 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms