RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 AGFG2O95081 481 aa14.36□□□□□ -0.11
PRKN-201ENST00000338468 SERPINA7P05543 415 aa14.36□□□□□ -0.11
PRKN-201ENST00000338468 COL6A2P12110 1019 aa14.36□□□□□ -0.11
PRKN-201ENST00000338468 EPB42P16452 691 aa14.36□□□□□ -0.11
PRKN-201ENST00000338468 TNFRSF8P28908 595 aa14.36□□□□□ -0.11
PRKN-201ENST00000338468 SOX11P35716 441 aa14.36□□□□□ -0.11
PRKN-201ENST00000338468 BTN3A2P78410 334 aa14.36□□□□□ -0.11
PRKN-201ENST00000338468 LAPTM5Q13571 262 aa14.36□□□□□ -0.11
PRKN-201ENST00000338468 RUNX2Q13950 521 aa14.36□□□□□ -0.11
PRKN-201ENST00000338468 PLEKHN1Q494U1 663 aaPredicted RBP14.36□□□□□ -0.11
PRKN-201ENST00000338468 PAGE2BQ5JRK9 111 aa14.36□□□□□ -0.11
PRKN-201ENST00000338468 AGAP7PQ5VUJ5 663 aa14.36□□□□□ -0.11
PRKN-201ENST00000338468 ABHD17CQ6PCB6 329 aa14.36□□□□□ -0.11
PRKN-201ENST00000338468 UBE3DQ7Z6J8 389 aa14.36□□□□□ -0.11
PRKN-201ENST00000338468 KBTBD2Q8IY47 623 aa14.36□□□□□ -0.11
PRKN-201ENST00000338468 PTGR2Q8N8N7 351 aaPredicted RBP14.36□□□□□ -0.11
PRKN-201ENST00000338468 OR2L5Q8NG80 312 aa14.36□□□□□ -0.11
PRKN-201ENST00000338468 ZNF473Q8WTR7 871 aaKnown RBP14.36□□□□□ -0.11
PRKN-201ENST00000338468 MZB1Q8WU39 189 aa14.36□□□□□ -0.11
PRKN-201ENST00000338468 METTL21AQ8WXB1 218 aa14.36□□□□□ -0.11
PRKN-201ENST00000338468 CCT6BQ92526 530 aa14.36□□□□□ -0.11
PRKN-201ENST00000338468 PNPLA2Q96AD5 504 aa14.36□□□□□ -0.11
PRKN-201ENST00000338468 AGAP4Q96P64 663 aa14.36□□□□□ -0.11
PRKN-201ENST00000338468 F2RL3Q96RI0 385 aa14.36□□□□□ -0.11
PRKN-201ENST00000338468 MS4A8Q9BY19 250 aa14.36□□□□□ -0.11
PRKN-201ENST00000338468 ANKZF1Q9H8Y5 726 aa14.36□□□□□ -0.11
PRKN-201ENST00000338468 RIC8BQ9NVN3 520 aa14.36□□□□□ -0.11
PRKN-201ENST00000338468 LUZP4Q9P127 313 aa14.36□□□□□ -0.11
PRKN-201ENST00000338468 FETUBQ9UGM5 382 aa14.36□□□□□ -0.11
PRKN-201ENST00000338468 ENO4A6NNW6 628 aa14.35□□□□□ -0.11
PRKN-201ENST00000338468 MAGEB17A8MXT2 336 aa14.35□□□□□ -0.11
PRKN-201ENST00000338468 KLHL41O60662 606 aa14.35□□□□□ -0.11
PRKN-201ENST00000338468 B4GALT2O60909 372 aa14.35□□□□□ -0.11
PRKN-201ENST00000338468 RBP1P09455 135 aa14.35□□□□□ -0.11
PRKN-201ENST00000338468 ITGAMP11215 1152 aa14.35□□□□□ -0.11
PRKN-201ENST00000338468 PLA2G16P53816 162 aa14.35□□□□□ -0.11
PRKN-201ENST00000338468 SKP1P63208 163 aa14.35□□□□□ -0.11
PRKN-201ENST00000338468 BTG2P78543 158 aa14.35□□□□□ -0.11
PRKN-201ENST00000338468 GTF2H2Q13888 395 aa14.35□□□□□ -0.11
PRKN-201ENST00000338468 ABRAXAS2Q15018 415 aa14.35□□□□□ -0.11
PRKN-201ENST00000338468 TSNAXIP1Q2TAA8 658 aa14.35□□□□□ -0.11
PRKN-201ENST00000338468 PRR30Q53SZ7 412 aaPredicted RBP14.35□□□□□ -0.11
PRKN-201ENST00000338468 HIST2H2BCQ6DN03 193 aa14.35□□□□□ -0.11
PRKN-201ENST00000338468 GRHL2Q6ISB3 625 aa14.35□□□□□ -0.11
PRKN-201ENST00000338468 GTF2H2CQ6P1K8 395 aa14.35□□□□□ -0.11
PRKN-201ENST00000338468 GOLGA7Q7Z5G4 137 aa14.35□□□□□ -0.11
PRKN-201ENST00000338468 RNF175Q8N4F7 328 aa14.35□□□□□ -0.11
PRKN-201ENST00000338468 OR7G3Q8NG95 312 aa14.35□□□□□ -0.11
PRKN-201ENST00000338468 BRIX1Q8TDN6 353 aaKnown RBP14.35□□□□□ -0.11
PRKN-201ENST00000338468 TUBB6Q9BUF5 446 aa14.35□□□□□ -0.11
PRKN-201ENST00000338468 REXO4Q9GZR2 422 aaKnown RBP14.35□□□□□ -0.11
PRKN-201ENST00000338468 PRDM7Q9NQW5 492 aa14.35□□□□□ -0.11
PRKN-201ENST00000338468 SCN2AQ99250 2005 aa14.35□□□□□ -0.11
PRKN-201ENST00000338468 CREBBPQ92793 2442 aa14.34□□□□□ -0.11
PRKN-201ENST00000338468 IGKV3D-11A0A0A0MRZ8 115 aa14.34□□□□□ -0.11
PRKN-201ENST00000338468 ZNF500O60304 480 aaPredicted RBP14.34□□□□□ -0.11
PRKN-201ENST00000338468 VPS4BO75351 444 aa14.34□□□□□ -0.11
PRKN-201ENST00000338468 SHBGP04278 402 aa14.34□□□□□ -0.11
PRKN-201ENST00000338468 RNH1P13489 461 aaKnown RBP14.34□□□□□ -0.11
PRKN-201ENST00000338468 EEF1DP29692 281 aaKnown RBP14.34□□□□□ -0.11
PRKN-201ENST00000338468 HNRNPFP52597 415 aaKnown RBP14.34□□□□□ -0.11
PRKN-201ENST00000338468 NSDHLQ15738 373 aa14.34□□□□□ -0.11
PRKN-201ENST00000338468 HIST2H2ACQ16777 129 aaPredicted RBP14.34□□□□□ -0.11
PRKN-201ENST00000338468 SFT2D3Q587I9 215 aa14.34□□□□□ -0.11
PRKN-201ENST00000338468 CRB2Q5IJ48 1285 aa14.34□□□□□ -0.11
PRKN-201ENST00000338468 PLAG1Q6DJT9 500 aa14.34□□□□□ -0.11
PRKN-201ENST00000338468 HIST2H2AA3Q6FI13 130 aa14.34□□□□□ -0.11
PRKN-201ENST00000338468 METTL2BQ6P1Q9 378 aaKnown RBP14.34□□□□□ -0.11
PRKN-201ENST00000338468 MED27Q6P2C8 311 aa14.34□□□□□ -0.11
PRKN-201ENST00000338468 ISLR2Q6UXK2 745 aa14.34□□□□□ -0.11
PRKN-201ENST00000338468 ZNF793Q6ZN11 406 aa14.34□□□□□ -0.11
PRKN-201ENST00000338468 QSOX2Q6ZRP7 698 aa14.34□□□□□ -0.11
PRKN-201ENST00000338468 RIPOR1Q6ZS17 1223 aa14.34□□□□□ -0.11
PRKN-201ENST00000338468 Q6ZS92 163 aa14.34□□□□□ -0.11
PRKN-201ENST00000338468 EFCAB3Q8N7B9 438 aa14.34□□□□□ -0.11
PRKN-201ENST00000338468 TMEM52Q8NDY8 209 aa14.34□□□□□ -0.11
PRKN-201ENST00000338468 MTBPQ96DY7 904 aa14.34□□□□□ -0.11
PRKN-201ENST00000338468 PHF21BQ96EK2 531 aa14.34□□□□□ -0.11
PRKN-201ENST00000338468 SCYL1Q96KG9 808 aa14.34□□□□□ -0.11
PRKN-201ENST00000338468 MRPL57Q9BQC6 102 aaKnown RBP14.34□□□□□ -0.11
PRKN-201ENST00000338468 NPLQ9BXD5 320 aaPredicted RBP14.34□□□□□ -0.11
PRKN-201ENST00000338468 ZBTB26Q9HCK0 441 aa14.34□□□□□ -0.11
PRKN-201ENST00000338468 C19orf25Q9UFG5 118 aaPredicted RBP14.34□□□□□ -0.11
PRKN-201ENST00000338468 VPS4AQ9UN37 437 aa14.34□□□□□ -0.11
PRKN-201ENST00000338468 B3GNT3Q9Y2A9 372 aa14.34□□□□□ -0.11
PRKN-201ENST00000338468 CLDN16Q9Y5I7 305 aa14.34□□□□□ -0.11
PRKN-201ENST00000338468 TNPO3Q9Y5L0 923 aaKnown RBP14.34□□□□□ -0.11
PRKN-201ENST00000338468 RP1L1Q8IWN7 2480 aaPredicted RBP14.34□□□□□ -0.11
PRKN-201ENST00000338468 TTLL8A6PVC2 850 aa14.33□□□□□ -0.12
PRKN-201ENST00000338468 STX16-NPEPL1H3BU86 382 aa14.33□□□□□ -0.12
PRKN-201ENST00000338468 TGFBR3LH3BV60 316 aa14.33□□□□□ -0.12
PRKN-201ENST00000338468 OR7A17O14581 309 aa14.33□□□□□ -0.12
PRKN-201ENST00000338468 STX16O14662 325 aa14.33□□□□□ -0.12
PRKN-201ENST00000338468 PCNAP12004 261 aa14.33□□□□□ -0.12
PRKN-201ENST00000338468 MAOAP21397 527 aa14.33□□□□□ -0.12
PRKN-201ENST00000338468 JAK1P23458 1154 aa14.33□□□□□ -0.12
PRKN-201ENST00000338468 CERS1P27544 350 aa14.33□□□□□ -0.12
PRKN-201ENST00000338468 MFAP5Q13361 173 aa14.33□□□□□ -0.12
PRKN-201ENST00000338468 FHL5Q5TD97 284 aa14.33□□□□□ -0.12
PRKN-201ENST00000338468 LGSNQ5TDP6 509 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms