RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 SLC12A4Q9UP95 1085 aa11.29□□□□□ -0.6
SPTLC1-202ENST00000337841 MAP4K5Q9Y4K4 846 aa11.29□□□□□ -0.6
SPTLC1-202ENST00000337841 PSMD12O00232 456 aaPredicted RBP11.28□□□□□ -0.6
SPTLC1-202ENST00000337841 TAF4O00268 1085 aa11.28□□□□□ -0.6
SPTLC1-202ENST00000337841 SLC28A1O00337 649 aa11.28□□□□□ -0.6
SPTLC1-202ENST00000337841 SAP18O00422 153 aaKnown RBP11.28□□□□□ -0.6
SPTLC1-202ENST00000337841 CHST10O43529 356 aa11.28□□□□□ -0.6
SPTLC1-202ENST00000337841 RDH16O75452 317 aa11.28□□□□□ -0.6
SPTLC1-202ENST00000337841 SEMA3DO95025 777 aa11.28□□□□□ -0.6
SPTLC1-202ENST00000337841 TBX6O95947 436 aaPredicted RBP11.28□□□□□ -0.6
SPTLC1-202ENST00000337841 RECKO95980 971 aa11.28□□□□□ -0.6
SPTLC1-202ENST00000337841 CHN1P15882 459 aa11.28□□□□□ -0.6
SPTLC1-202ENST00000337841 ITGAXP20702 1163 aa11.28□□□□□ -0.6
SPTLC1-202ENST00000337841 SSR2P43308 183 aa11.28□□□□□ -0.6
SPTLC1-202ENST00000337841 UCNP55089 124 aa11.28□□□□□ -0.6
SPTLC1-202ENST00000337841 MC1RQ01726 317 aa11.28□□□□□ -0.6
SPTLC1-202ENST00000337841 BST1Q10588 318 aa11.28□□□□□ -0.6
SPTLC1-202ENST00000337841 ABRAXAS2Q15018 415 aa11.28□□□□□ -0.6
SPTLC1-202ENST00000337841 NCF4Q15080 339 aa11.28□□□□□ -0.6
SPTLC1-202ENST00000337841 IMPG1Q17R60 797 aa11.28□□□□□ -0.6
SPTLC1-202ENST00000337841 SH2D4BQ5SQS7 431 aa11.28□□□□□ -0.6
SPTLC1-202ENST00000337841 MRPL14Q6P1L8 145 aaKnown RBP11.28□□□□□ -0.6
SPTLC1-202ENST00000337841 PRSS41Q7RTY9 318 aa11.28□□□□□ -0.6
SPTLC1-202ENST00000337841 PAGE2Q7Z2X7 111 aa11.28□□□□□ -0.6
SPTLC1-202ENST00000337841 UBE3DQ7Z6J8 389 aa11.28□□□□□ -0.6
SPTLC1-202ENST00000337841 PDSS2Q86YH6 399 aa11.28□□□□□ -0.6
SPTLC1-202ENST00000337841 SPACA3Q8IXA5 215 aa11.28□□□□□ -0.6
SPTLC1-202ENST00000337841 ENDOVQ8N8Q3 282 aaKnown RBP11.28□□□□□ -0.6
SPTLC1-202ENST00000337841 OR51Q1Q8NH59 317 aa11.28□□□□□ -0.6
SPTLC1-202ENST00000337841 LRRC8CQ8TDW0 803 aa11.28□□□□□ -0.6
SPTLC1-202ENST00000337841 ZNF75CPQ92670 426 aaPredicted RBP11.28□□□□□ -0.6
SPTLC1-202ENST00000337841 MIEF2Q96C03 454 aa11.28□□□□□ -0.6
SPTLC1-202ENST00000337841 CCT7Q99832 543 aa11.28□□□□□ -0.6
SPTLC1-202ENST00000337841 SLC26A1Q9H2B4 701 aa11.28□□□□□ -0.6
SPTLC1-202ENST00000337841 WDR54Q9H977 334 aa11.28□□□□□ -0.6
SPTLC1-202ENST00000337841 FIS1Q9Y3D6 152 aa11.28□□□□□ -0.6
SPTLC1-202ENST00000337841 RAP2CQ9Y3L5 183 aa11.28□□□□□ -0.6
SPTLC1-202ENST00000337841 PCDHGA6Q9Y5G7 932 aa11.28□□□□□ -0.6
SPTLC1-202ENST00000337841 SPACA6W5XKT8 324 aa11.28□□□□□ -0.6
SPTLC1-202ENST00000337841 A0A087WV48 116 aa11.27□□□□□ -0.61
SPTLC1-202ENST00000337841 A0A0G2JN53 185 aa11.27□□□□□ -0.61
SPTLC1-202ENST00000337841 ARHGAP10A1A4S6 786 aa11.27□□□□□ -0.61
SPTLC1-202ENST00000337841 ZNF860A6NHJ4 632 aa11.27□□□□□ -0.61
SPTLC1-202ENST00000337841 VSTM2BA6NLU5 285 aa11.27□□□□□ -0.61
SPTLC1-202ENST00000337841 KLF11O14901 512 aa11.27□□□□□ -0.61
SPTLC1-202ENST00000337841 RGS14O43566 566 aa11.27□□□□□ -0.61
SPTLC1-202ENST00000337841 ITM2AO43736 263 aa11.27□□□□□ -0.61
SPTLC1-202ENST00000337841 LYPLA1O75608 230 aaPredicted RBP11.27□□□□□ -0.61
SPTLC1-202ENST00000337841 B3GALT4O96024 378 aa11.27□□□□□ -0.61
SPTLC1-202ENST00000337841 IGHEP01854 428 aa11.27□□□□□ -0.61
SPTLC1-202ENST00000337841 RNH1P13489 461 aaKnown RBP11.27□□□□□ -0.61
SPTLC1-202ENST00000337841 LIFP15018 202 aa11.27□□□□□ -0.61
SPTLC1-202ENST00000337841 HIST1H1TP22492 207 aaPredicted RBP11.27□□□□□ -0.61
SPTLC1-202ENST00000337841 ATP5A1P25705 553 aaKnown RBP11.27□□□□□ -0.61
SPTLC1-202ENST00000337841 FOLR3P41439 243 aa11.27□□□□□ -0.61
SPTLC1-202ENST00000337841 RPL14P50914 215 aaKnown RBP11.27□□□□□ -0.61
SPTLC1-202ENST00000337841 FOXA1P55317 472 aa11.27□□□□□ -0.61
SPTLC1-202ENST00000337841 MAT1AQ00266 395 aaKnown RBP11.27□□□□□ -0.61
SPTLC1-202ENST00000337841 SLAMF1Q13291 335 aa11.27□□□□□ -0.61
SPTLC1-202ENST00000337841 NKG7Q16617 165 aa11.27□□□□□ -0.61
SPTLC1-202ENST00000337841 SPDYAQ5MJ70 313 aa11.27□□□□□ -0.61
SPTLC1-202ENST00000337841 TCHHL1Q5QJ38 904 aaPredicted RBP11.27□□□□□ -0.61
SPTLC1-202ENST00000337841 KANK2Q63ZY3 851 aa11.27□□□□□ -0.61
SPTLC1-202ENST00000337841 CLEC6AQ6EIG7 209 aa11.27□□□□□ -0.61
SPTLC1-202ENST00000337841 CYP20A1Q6UW02 462 aa11.27□□□□□ -0.61
SPTLC1-202ENST00000337841 SCIMPQ6UWF3 145 aa11.27□□□□□ -0.61
SPTLC1-202ENST00000337841 FAM198BQ6UWH4 519 aa11.27□□□□□ -0.61
SPTLC1-202ENST00000337841 CCDC81Q6ZN84 652 aa11.27□□□□□ -0.61
SPTLC1-202ENST00000337841 COX15Q7KZN9 410 aa11.27□□□□□ -0.61
SPTLC1-202ENST00000337841 TRIM46Q7Z4K8 759 aa11.27□□□□□ -0.61
SPTLC1-202ENST00000337841 VASH2Q86V25 355 aa11.27□□□□□ -0.61
SPTLC1-202ENST00000337841 DTWD1Q8N5C7 304 aa11.27□□□□□ -0.61
SPTLC1-202ENST00000337841 AMER3Q8N944 861 aa11.27□□□□□ -0.61
SPTLC1-202ENST00000337841 ACOT4Q8N9L9 421 aa11.27□□□□□ -0.61
SPTLC1-202ENST00000337841 STT3BQ8TCJ2 826 aa11.27□□□□□ -0.61
SPTLC1-202ENST00000337841 SLC45A3Q96JT2 553 aa11.27□□□□□ -0.61
SPTLC1-202ENST00000337841 TGIF2Q9GZN2 237 aa11.27□□□□□ -0.61
SPTLC1-202ENST00000337841 AICDAQ9GZX7 198 aa11.27□□□□□ -0.61
SPTLC1-202ENST00000337841 DDX31Q9H8H2 851 aaKnown RBP11.27□□□□□ -0.61
SPTLC1-202ENST00000337841 C14orf105Q9NVL8 296 aa11.27□□□□□ -0.61
SPTLC1-202ENST00000337841 HCN3Q9P1Z3 774 aa11.27□□□□□ -0.61
SPTLC1-202ENST00000337841 IL17BQ9UHF5 180 aa11.27□□□□□ -0.61
SPTLC1-202ENST00000337841 ZDHHC2Q9UIJ5 367 aa11.27□□□□□ -0.61
SPTLC1-202ENST00000337841 ADAM29Q9UKF5 820 aa11.27□□□□□ -0.61
SPTLC1-202ENST00000337841 TCFL5Q9UL49 500 aa11.27□□□□□ -0.61
SPTLC1-202ENST00000337841 BOLA1Q9Y3E2 137 aa11.27□□□□□ -0.61
SPTLC1-202ENST00000337841 PTRH2Q9Y3E5 179 aaKnown RBP11.27□□□□□ -0.61
SPTLC1-202ENST00000337841 DCHS1Q96JQ0 3298 aa11.27□□□□□ -0.61
SPTLC1-202ENST00000337841 IGLV3-12A0A075B6K2 115 aa11.26□□□□□ -0.61
SPTLC1-202ENST00000337841 ZNF891A8MT65 544 aaPredicted RBP11.26□□□□□ -0.61
SPTLC1-202ENST00000337841 RTCAO00442 366 aaKnown RBP11.26□□□□□ -0.61
SPTLC1-202ENST00000337841 CLDN4O14493 209 aa11.26□□□□□ -0.61
SPTLC1-202ENST00000337841 PLPP1O14494 284 aa11.26□□□□□ -0.61
SPTLC1-202ENST00000337841 TERTO14746 1132 aaKnown RBP11.26□□□□□ -0.61
SPTLC1-202ENST00000337841 GUCY1B2O75343 617 aa11.26□□□□□ -0.61
SPTLC1-202ENST00000337841 CREG1O75629 220 aa11.26□□□□□ -0.61
SPTLC1-202ENST00000337841 MYO1DO94832 1006 aa11.26□□□□□ -0.61
SPTLC1-202ENST00000337841 BMP10O95393 424 aa11.26□□□□□ -0.61
SPTLC1-202ENST00000337841 ETHE1O95571 254 aa11.26□□□□□ -0.61
SPTLC1-202ENST00000337841 HEXBP07686 556 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms