RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 SH2D4BQ5SQS7 431 aa16.96■□□□□ 0.31
SSSCA1-201ENST00000309328 OR4C11Q6IEV9 310 aa16.96■□□□□ 0.31
SSSCA1-201ENST00000309328 MED25Q71SY5 747 aa16.96■□□□□ 0.31
SSSCA1-201ENST00000309328 NUDT13Q86X67 352 aa16.96■□□□□ 0.31
SSSCA1-201ENST00000309328 ZCCHC7Q8N3Z6 543 aaKnown RBP16.96■□□□□ 0.31
SSSCA1-201ENST00000309328 VPS50Q96JG6 964 aa16.96■□□□□ 0.31
SSSCA1-201ENST00000309328 SLC45A3Q96JT2 553 aa16.96■□□□□ 0.31
SSSCA1-201ENST00000309328 F2RL3Q96RI0 385 aa16.96■□□□□ 0.31
SSSCA1-201ENST00000309328 OR51B5Q9H339 312 aa16.96■□□□□ 0.31
SSSCA1-201ENST00000309328 KLHL31Q9H511 634 aa16.96■□□□□ 0.31
SSSCA1-201ENST00000309328 LYRM4Q9HD34 91 aa16.96■□□□□ 0.31
SSSCA1-201ENST00000309328 MS4A12Q9NXJ0 267 aa16.96■□□□□ 0.31
SSSCA1-201ENST00000309328 TRPC4Q9UBN4 977 aa16.96■□□□□ 0.31
SSSCA1-201ENST00000309328 SLC12A4Q9UP95 1085 aa16.96■□□□□ 0.31
SSSCA1-201ENST00000309328 FARSAQ9Y285 508 aaKnown RBP16.96■□□□□ 0.31
SSSCA1-201ENST00000309328 FRYQ5TBA9 3013 aa16.96■□□□□ 0.3
SSSCA1-201ENST00000309328 NPIPB8E9PQR5 432 aa16.95■□□□□ 0.3
SSSCA1-201ENST00000309328 SLCO1B7G3V0H7 640 aa16.95■□□□□ 0.3
SSSCA1-201ENST00000309328 SGK494L7N484 410 aa16.95■□□□□ 0.3
SSSCA1-201ENST00000309328 PSMD12O00232 456 aaPredicted RBP16.95■□□□□ 0.3
SSSCA1-201ENST00000309328 SLC28A1O00337 649 aa16.95■□□□□ 0.3
SSSCA1-201ENST00000309328 MED26O95402 600 aa16.95■□□□□ 0.3
SSSCA1-201ENST00000309328 IGHEP01854 428 aa16.95■□□□□ 0.3
SSSCA1-201ENST00000309328 CHRNGP07510 517 aa16.95■□□□□ 0.3
SSSCA1-201ENST00000309328 RNH1P13489 461 aaKnown RBP16.95■□□□□ 0.3
SSSCA1-201ENST00000309328 HIST1H1TP22492 207 aaPredicted RBP16.95■□□□□ 0.3
SSSCA1-201ENST00000309328 JAK1P23458 1154 aa16.95■□□□□ 0.3
SSSCA1-201ENST00000309328 GSTM5P46439 218 aa16.95■□□□□ 0.3
SSSCA1-201ENST00000309328 BTN3A2P78410 334 aa16.95■□□□□ 0.3
SSSCA1-201ENST00000309328 BST1Q10588 318 aa16.95■□□□□ 0.3
SSSCA1-201ENST00000309328 IMPG1Q17R60 797 aa16.95■□□□□ 0.3
SSSCA1-201ENST00000309328 SGO1Q5FBB7 561 aa16.95■□□□□ 0.3
SSSCA1-201ENST00000309328 MLIPQ5VWP3 458 aa16.95■□□□□ 0.3
SSSCA1-201ENST00000309328 ADNP2Q6IQ32 1131 aa16.95■□□□□ 0.3
SSSCA1-201ENST00000309328 PDSS2Q86YH6 399 aa16.95■□□□□ 0.3
SSSCA1-201ENST00000309328 SPACA3Q8IXA5 215 aa16.95■□□□□ 0.3
SSSCA1-201ENST00000309328 AMER3Q8N944 861 aa16.95■□□□□ 0.3
SSSCA1-201ENST00000309328 LRRC8CQ8TDW0 803 aa16.95■□□□□ 0.3
SSSCA1-201ENST00000309328 MTFMTQ96DP5 389 aaKnown RBP16.95■□□□□ 0.3
SSSCA1-201ENST00000309328 IP6K3Q96PC2 410 aa16.95■□□□□ 0.3
SSSCA1-201ENST00000309328 DDX31Q9H8H2 851 aaKnown RBP16.95■□□□□ 0.3
SSSCA1-201ENST00000309328 MRPS33Q9Y291 106 aaKnown RBP16.95■□□□□ 0.3
SSSCA1-201ENST00000309328 MRPS2Q9Y399 296 aaKnown RBP16.95■□□□□ 0.3
SSSCA1-201ENST00000309328 TIMM22Q9Y584 194 aa16.95■□□□□ 0.3
SSSCA1-201ENST00000309328 MAU2Q9Y6X3 613 aa16.95■□□□□ 0.3
SSSCA1-201ENST00000309328 APC2O95996 2303 aa16.95■□□□□ 0.3
SSSCA1-201ENST00000309328 ACACAQ13085 2346 aa16.95■□□□□ 0.3
SSSCA1-201ENST00000309328 LOC101059948A0A1B0GTJ6 334 aa16.94■□□□□ 0.3
SSSCA1-201ENST00000309328 ARHGAP10A1A4S6 786 aa16.94■□□□□ 0.3
SSSCA1-201ENST00000309328 VSTM2BA6NLU5 285 aa16.94■□□□□ 0.3
SSSCA1-201ENST00000309328 ZNF891A8MT65 544 aaPredicted RBP16.94■□□□□ 0.3
SSSCA1-201ENST00000309328 RGS14O43566 566 aa16.94■□□□□ 0.3
SSSCA1-201ENST00000309328 SNNO75324 88 aaPredicted RBP16.94■□□□□ 0.3
SSSCA1-201ENST00000309328 GUCY1B2O75343 617 aa16.94■□□□□ 0.3
SSSCA1-201ENST00000309328 RDH16O75452 317 aa16.94■□□□□ 0.3
SSSCA1-201ENST00000309328 RSL1D1O76021 490 aaKnown RBP16.94■□□□□ 0.3
SSSCA1-201ENST00000309328 ATP5A1P25705 553 aaKnown RBP16.94■□□□□ 0.3
SSSCA1-201ENST00000309328 RPL14P50914 215 aaKnown RBP16.94■□□□□ 0.3
SSSCA1-201ENST00000309328 ABRAXAS2Q15018 415 aa16.94■□□□□ 0.3
SSSCA1-201ENST00000309328 TGIF1Q15583 401 aa16.94■□□□□ 0.3
SSSCA1-201ENST00000309328 NKG7Q16617 165 aa16.94■□□□□ 0.3
SSSCA1-201ENST00000309328 COX15Q7KZN9 410 aa16.94■□□□□ 0.3
SSSCA1-201ENST00000309328 METTL4Q8N3J2 472 aa16.94■□□□□ 0.3
SSSCA1-201ENST00000309328 ENDOVQ8N8Q3 282 aaKnown RBP16.94■□□□□ 0.3
SSSCA1-201ENST00000309328 OR2Y1Q8NGV0 311 aa16.94■□□□□ 0.3
SSSCA1-201ENST00000309328 OR51Q1Q8NH59 317 aa16.94■□□□□ 0.3
SSSCA1-201ENST00000309328 FAM76AQ8TAV0 307 aa16.94■□□□□ 0.3
SSSCA1-201ENST00000309328 TBC1D20Q96BZ9 403 aa16.94■□□□□ 0.3
SSSCA1-201ENST00000309328 MIEF2Q96C03 454 aa16.94■□□□□ 0.3
SSSCA1-201ENST00000309328 KCNA7Q96RP8 456 aa16.94■□□□□ 0.3
SSSCA1-201ENST00000309328 AICDAQ9GZX7 198 aa16.94■□□□□ 0.3
SSSCA1-201ENST00000309328 PRDM7Q9NQW5 492 aa16.94■□□□□ 0.3
SSSCA1-201ENST00000309328 SLC22A11Q9NSA0 550 aa16.94■□□□□ 0.3
SSSCA1-201ENST00000309328 LYARQ9NX58 379 aaKnown RBP16.94■□□□□ 0.3
SSSCA1-201ENST00000309328 PHF11Q9UIL8 331 aa16.94■□□□□ 0.3
SSSCA1-201ENST00000309328 TCFL5Q9UL49 500 aa16.94■□□□□ 0.3
SSSCA1-201ENST00000309328 RAXQ9Y2V3 346 aa16.94■□□□□ 0.3
SSSCA1-201ENST00000309328 DNAJC15Q9Y5T4 150 aa16.94■□□□□ 0.3
SSSCA1-201ENST00000309328 CHD8Q9HCK8 2581 aa16.94■□□□□ 0.3
SSSCA1-201ENST00000309328 SDK2Q58EX2 2172 aa16.94■□□□□ 0.3
SSSCA1-201ENST00000309328 MDC1Q14676 2089 aaKnown RBP16.93■□□□□ 0.3
SSSCA1-201ENST00000309328 PLPP1O14494 284 aa16.93■□□□□ 0.3
SSSCA1-201ENST00000309328 ZGLP1P0C6A0 271 aa16.93■□□□□ 0.3
SSSCA1-201ENST00000309328 LIFP15018 202 aa16.93■□□□□ 0.3
SSSCA1-201ENST00000309328 PRPH2P23942 346 aa16.93■□□□□ 0.3
SSSCA1-201ENST00000309328 TLX1P31314 330 aaPredicted RBP16.93■□□□□ 0.3
SSSCA1-201ENST00000309328 FOLR3P41439 243 aa16.93■□□□□ 0.3
SSSCA1-201ENST00000309328 CCR10P46092 362 aa16.93■□□□□ 0.3
SSSCA1-201ENST00000309328 XCR1P46094 333 aa16.93■□□□□ 0.3
SSSCA1-201ENST00000309328 FOXA1P55317 472 aa16.93■□□□□ 0.3
SSSCA1-201ENST00000309328 ACSM2AQ08AH3 577 aa16.93■□□□□ 0.3
SSSCA1-201ENST00000309328 SLC9A5Q14940 896 aa16.93■□□□□ 0.3
SSSCA1-201ENST00000309328 TUBB8Q3ZCM7 444 aa16.93■□□□□ 0.3
SSSCA1-201ENST00000309328 ACSM2BQ68CK6 577 aa16.93■□□□□ 0.3
SSSCA1-201ENST00000309328 CLEC6AQ6EIG7 209 aa16.93■□□□□ 0.3
SSSCA1-201ENST00000309328 FAM199XQ6PEV8 388 aaPredicted RBP16.93■□□□□ 0.3
SSSCA1-201ENST00000309328 CYP20A1Q6UW02 462 aa16.93■□□□□ 0.3
SSSCA1-201ENST00000309328 UBE3DQ7Z6J8 389 aa16.93■□□□□ 0.3
SSSCA1-201ENST00000309328 METTL27Q8N6F8 245 aaPredicted RBP16.93■□□□□ 0.3
SSSCA1-201ENST00000309328 ACOT4Q8N9L9 421 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms