RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 C4orf51C9J302 202 aa6.24□□□□□ -1.41
USP47-201ENST00000305481 NOBOXO60393 691 aa6.24□□□□□ -1.41
USP47-201ENST00000305481 STATHP02808 62 aa6.24□□□□□ -1.41
USP47-201ENST00000305481 ACADMP11310 421 aa6.24□□□□□ -1.41
USP47-201ENST00000305481 ETFAP13804 333 aa6.24□□□□□ -1.41
USP47-201ENST00000305481 BCL6P41182 706 aa6.24□□□□□ -1.41
USP47-201ENST00000305481 VLDLRP98155 873 aa6.24□□□□□ -1.41
USP47-201ENST00000305481 LRRC74AQ0VAA2 488 aa6.24□□□□□ -1.41
USP47-201ENST00000305481 HYAL2Q12891 473 aa6.24□□□□□ -1.41
USP47-201ENST00000305481 NFATC4Q14934 902 aa6.24□□□□□ -1.41
USP47-201ENST00000305481 SLC5A12Q1EHB4 618 aa6.24□□□□□ -1.41
USP47-201ENST00000305481 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.24□□□□□ -1.41
USP47-201ENST00000305481 CBLL1Q75N03 491 aa6.24□□□□□ -1.41
USP47-201ENST00000305481 TRIM73Q86UV7 250 aa6.24□□□□□ -1.41
USP47-201ENST00000305481 TRIM69Q86WT6 500 aa6.24□□□□□ -1.41
USP47-201ENST00000305481 ZDHHC21Q8IVQ6 265 aa6.24□□□□□ -1.41
USP47-201ENST00000305481 OR5AK3PQ8NH89 298 aa6.24□□□□□ -1.41
USP47-201ENST00000305481 TRAPPC9Q96Q05 1148 aa6.24□□□□□ -1.41
USP47-201ENST00000305481 TEFMQ96QE5 360 aaKnown RBP6.24□□□□□ -1.41
USP47-201ENST00000305481 OR2M4Q96R27 311 aa6.24□□□□□ -1.41
USP47-201ENST00000305481 SLC35A5Q9BS91 424 aa6.24□□□□□ -1.41
USP47-201ENST00000305481 ASPSCR1Q9BZE9 553 aa6.24□□□□□ -1.41
USP47-201ENST00000305481 PITHD1Q9GZP4 211 aaPredicted RBP6.24□□□□□ -1.41
USP47-201ENST00000305481 C1GALT1Q9NS00 363 aa6.24□□□□□ -1.41
USP47-201ENST00000305481 C5AR2Q9P296 337 aa6.24□□□□□ -1.41
USP47-201ENST00000305481 ZNF624Q9P2J8 865 aaPredicted RBP6.24□□□□□ -1.41
USP47-201ENST00000305481 MYRFQ9Y2G1 1151 aa6.24□□□□□ -1.41
USP47-201ENST00000305481 U3KQV3 271 aa6.24□□□□□ -1.41
USP47-201ENST00000305481 A0A1W2PRB8 838 aa6.24□□□□□ -1.41
USP47-201ENST00000305481 LRIT2A6NDA9 550 aa6.24□□□□□ -1.41
USP47-201ENST00000305481 NDUFS4O43181 175 aa6.24□□□□□ -1.41
USP47-201ENST00000305481 DIRAS1O95057 198 aa6.24□□□□□ -1.41
USP47-201ENST00000305481 DDCP20711 480 aa6.24□□□□□ -1.41
USP47-201ENST00000305481 RPL5P46777 297 aaKnown RBP6.24□□□□□ -1.41
USP47-201ENST00000305481 MAPK12P53778 367 aa6.24□□□□□ -1.41
USP47-201ENST00000305481 CDH15P55291 814 aa6.24□□□□□ -1.41
USP47-201ENST00000305481 KRT33BQ14525 404 aa6.24□□□□□ -1.41
USP47-201ENST00000305481 ZIC1Q15915 447 aa6.24□□□□□ -1.41
USP47-201ENST00000305481 NADK2Q4G0N4 442 aa6.24□□□□□ -1.41
USP47-201ENST00000305481 ABRAXAS1Q6UWZ7 409 aa6.24□□□□□ -1.41
USP47-201ENST00000305481 EIF3MQ7L2H7 374 aaKnown RBP6.24□□□□□ -1.41
USP47-201ENST00000305481 RD3Q7Z3Z2 195 aa6.24□□□□□ -1.41
USP47-201ENST00000305481 TSEN54Q7Z6J9 526 aaKnown RBP6.24□□□□□ -1.41
USP47-201ENST00000305481 TSPAN14Q8NG11 270 aa6.24□□□□□ -1.41
USP47-201ENST00000305481 OR2L3Q8NG85 312 aa6.24□□□□□ -1.41
USP47-201ENST00000305481 MUS81Q96NY9 551 aa6.24□□□□□ -1.41
USP47-201ENST00000305481 MBOAT4Q96T53 435 aa6.24□□□□□ -1.41
USP47-201ENST00000305481 SPATA9Q9BWV2 254 aa6.24□□□□□ -1.41
USP47-201ENST00000305481 TMEM168Q9H0V1 697 aa6.24□□□□□ -1.41
USP47-201ENST00000305481 EPS8L2Q9H6S3 715 aa6.24□□□□□ -1.41
USP47-201ENST00000305481 CD320Q9NPF0 282 aa6.24□□□□□ -1.41
USP47-201ENST00000305481 TEX10Q9NXF1 929 aaPredicted RBP6.24□□□□□ -1.41
USP47-201ENST00000305481 TAS2R9Q9NYW1 312 aa6.24□□□□□ -1.41
USP47-201ENST00000305481 AHSPQ9NZD4 102 aa6.24□□□□□ -1.41
USP47-201ENST00000305481 PADI4Q9UM07 663 aa6.24□□□□□ -1.41
USP47-201ENST00000305481 KLHL20Q9Y2M5 609 aa6.24□□□□□ -1.41
USP47-201ENST00000305481 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.24□□□□□ -1.41
USP47-201ENST00000305481 A0A0G2JN53 185 aa6.24□□□□□ -1.41
USP47-201ENST00000305481 WASHC1A8K0Z3 465 aa6.24□□□□□ -1.41
USP47-201ENST00000305481 hCG_2039718K7EN88 272 aa6.24□□□□□ -1.41
USP47-201ENST00000305481 HAT1O14929 419 aa6.24□□□□□ -1.41
USP47-201ENST00000305481 CAPN5O15484 640 aaPredicted RBP6.24□□□□□ -1.41
USP47-201ENST00000305481 SEC24DO94855 1032 aaPredicted RBP6.24□□□□□ -1.41
USP47-201ENST00000305481 PPIBP23284 216 aaKnown RBP6.24□□□□□ -1.41
USP47-201ENST00000305481 AQP1P29972 269 aa6.24□□□□□ -1.41
USP47-201ENST00000305481 SERPINB1P30740 379 aa6.24□□□□□ -1.41
USP47-201ENST00000305481 PCGF2P35227 344 aa6.24□□□□□ -1.41
USP47-201ENST00000305481 RPL3P39023 403 aaKnown RBP6.24□□□□□ -1.41
USP47-201ENST00000305481 CRATP43155 626 aa6.24□□□□□ -1.41
USP47-201ENST00000305481 KCNJ10P78508 379 aa6.24□□□□□ -1.41
USP47-201ENST00000305481 EEF1A2Q05639 463 aaKnown RBP6.24□□□□□ -1.41
USP47-201ENST00000305481 PLCL1Q15111 1095 aa6.24□□□□□ -1.41
USP47-201ENST00000305481 KIAA1614Q5VZ46 1190 aa6.24□□□□□ -1.41
USP47-201ENST00000305481 SPESP1Q6UW49 350 aa6.24□□□□□ -1.41
USP47-201ENST00000305481 WASH2PQ6VEQ5 465 aa6.24□□□□□ -1.41
USP47-201ENST00000305481 ZNF793Q6ZN11 406 aa6.24□□□□□ -1.41
USP47-201ENST00000305481 Q6ZS52 159 aa6.24□□□□□ -1.41
USP47-201ENST00000305481 CEP68Q76N32 757 aa6.24□□□□□ -1.41
USP47-201ENST00000305481 LPCAT2Q7L5N7 544 aa6.24□□□□□ -1.41
USP47-201ENST00000305481 ADCK2Q7Z695 626 aa6.24□□□□□ -1.41
USP47-201ENST00000305481 PATL1Q86TB9 770 aaKnown RBP6.24□□□□□ -1.41
USP47-201ENST00000305481 RNF130Q86XS8 419 aa6.24□□□□□ -1.41
USP47-201ENST00000305481 ADHFE1Q8IWW8 467 aa6.24□□□□□ -1.41
USP47-201ENST00000305481 SVOPLQ8N434 492 aa6.24□□□□□ -1.41
USP47-201ENST00000305481 DENND6BQ8NEG7 585 aa6.24□□□□□ -1.41
USP47-201ENST00000305481 PJA1Q8NG27 643 aa6.24□□□□□ -1.41
USP47-201ENST00000305481 DNASE1L2Q92874 299 aa6.24□□□□□ -1.41
USP47-201ENST00000305481 RMND5BQ96G75 393 aaPredicted RBP6.24□□□□□ -1.41
USP47-201ENST00000305481 HSH2DQ96JZ2 352 aa6.24□□□□□ -1.41
USP47-201ENST00000305481 C7orf34Q96L11 122 aa6.24□□□□□ -1.41
USP47-201ENST00000305481 AMBRA1Q9C0C7 1298 aa6.24□□□□□ -1.41
USP47-201ENST00000305481 GRIP2Q9C0E4 1043 aa6.24□□□□□ -1.41
USP47-201ENST00000305481 KIR3DX1Q9H7L2 352 aa6.24□□□□□ -1.41
USP47-201ENST00000305481 CXorf36Q9H7Y0 433 aa6.24□□□□□ -1.41
USP47-201ENST00000305481 DDX31Q9H8H2 851 aaKnown RBP6.24□□□□□ -1.41
USP47-201ENST00000305481 CLK4Q9HAZ1 481 aaKnown RBP6.24□□□□□ -1.41
USP47-201ENST00000305481 MIEF1Q9NQG6 463 aa6.24□□□□□ -1.41
USP47-201ENST00000305481 TMEFF2Q9UIK5 374 aaPredicted RBP6.24□□□□□ -1.41
USP47-201ENST00000305481 MMP17Q9ULZ9 603 aa6.24□□□□□ -1.41
USP47-201ENST00000305481 FAF1Q9UNN5 650 aaPredicted RBP6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms