RNA–Protein interactions for RNA: ENST00000303354.10

SCN9A-201, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 9,786 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-201ENST00000303354 MANBAO00462 879 aa7.52□□□□□ -1.21
SCN9A-201ENST00000303354 SLC7A4O43246 635 aa7.52□□□□□ -1.21
SCN9A-201ENST00000303354 FAM160A2Q8N612 972 aaPredicted RBP7.52□□□□□ -1.21
SCN9A-201ENST00000303354 TINAGL1Q9GZM7 467 aaPredicted RBP7.52□□□□□ -1.21
SCN9A-201ENST00000303354 TMEM248Q9NWD8 314 aa7.52□□□□□ -1.21
SCN9A-201ENST00000303354 LYARQ9NX58 379 aaKnown RBP7.52□□□□□ -1.21
SCN9A-201ENST00000303354 ZNF840PA6NDX5 716 aa7.52□□□□□ -1.21
SCN9A-201ENST00000303354 SLC30A4O14863 429 aa7.52□□□□□ -1.21
SCN9A-201ENST00000303354 LCA5LO95447 670 aa7.52□□□□□ -1.21
SCN9A-201ENST00000303354 CYP17A1P05093 508 aa7.52□□□□□ -1.21
SCN9A-201ENST00000303354 ABHD2P08910 425 aa7.52□□□□□ -1.21
SCN9A-201ENST00000303354 MYF5P13349 255 aa7.52□□□□□ -1.21
SCN9A-201ENST00000303354 MSS51Q4VC12 460 aa7.52□□□□□ -1.21
SCN9A-201ENST00000303354 RUNDC3AQ59EK9 446 aa7.52□□□□□ -1.21
SCN9A-201ENST00000303354 MFSD2AQ8NA29 543 aa7.52□□□□□ -1.21
SCN9A-201ENST00000303354 RETREG1Q9H6L5 497 aa7.52□□□□□ -1.21
SCN9A-201ENST00000303354 S100A14Q9HCY8 104 aa7.52□□□□□ -1.21
SCN9A-201ENST00000303354 SPATA7Q9P0W8 599 aa7.52□□□□□ -1.21
SCN9A-201ENST00000303354 WDR45Q9Y484 360 aa7.52□□□□□ -1.21
SCN9A-201ENST00000303354 COL3A1P02461 1466 aaPredicted RBP7.51□□□□□ -1.21
SCN9A-201ENST00000303354 CHST10O43529 356 aa7.51□□□□□ -1.21
SCN9A-201ENST00000303354 MLLT6P55198 1093 aaPredicted RBP7.51□□□□□ -1.21
SCN9A-201ENST00000303354 SLC26A5P58743 744 aa7.51□□□□□ -1.21
SCN9A-201ENST00000303354 FOXC1Q12948 553 aa7.51□□□□□ -1.21
SCN9A-201ENST00000303354 SYT16Q17RD7 645 aa7.51□□□□□ -1.21
SCN9A-201ENST00000303354 ZNF423Q2M1K9 1284 aa7.51□□□□□ -1.21
SCN9A-201ENST00000303354 RFTN2Q52LD8 501 aaPredicted RBP7.51□□□□□ -1.21
SCN9A-201ENST00000303354 FIGLAQ6QHK4 219 aa7.51□□□□□ -1.21
SCN9A-201ENST00000303354 OR5AR1Q8NGP9 310 aa7.51□□□□□ -1.21
SCN9A-201ENST00000303354 COQ8AQ8NI60 647 aa7.51□□□□□ -1.21
SCN9A-201ENST00000303354 PLEKHO2Q8TD55 490 aa7.51□□□□□ -1.21
SCN9A-201ENST00000303354 GLYATL1Q969I3 302 aa7.51□□□□□ -1.21
SCN9A-201ENST00000303354 LRRC46Q96FV0 321 aa7.51□□□□□ -1.21
SCN9A-201ENST00000303354 FCRL3Q96P31 734 aaPredicted RBP7.51□□□□□ -1.21
SCN9A-201ENST00000303354 MGME1Q9BQP7 344 aa7.51□□□□□ -1.21
SCN9A-201ENST00000303354 POLR2J3Q9H1A7 115 aaKnown RBP7.51□□□□□ -1.21
SCN9A-201ENST00000303354 MMADHCQ9H3L0 296 aaPredicted RBP7.51□□□□□ -1.21
SCN9A-201ENST00000303354 USP29Q9HBJ7 922 aa7.51□□□□□ -1.21
SCN9A-201ENST00000303354 ZNF446Q9NWS9 450 aa7.51□□□□□ -1.21
SCN9A-201ENST00000303354 MKLN1Q9UL63 735 aa7.51□□□□□ -1.21
SCN9A-201ENST00000303354 TLX2O43763 284 aaPredicted RBP7.51□□□□□ -1.21
SCN9A-201ENST00000303354 C4orf46Q504U0 113 aa7.51□□□□□ -1.21
SCN9A-201ENST00000303354 CATSPEREQ5SY80 951 aa7.51□□□□□ -1.21
SCN9A-201ENST00000303354 LRP10Q7Z4F1 713 aa7.51□□□□□ -1.21
SCN9A-201ENST00000303354 AMER2Q8N7J2 671 aa7.51□□□□□ -1.21
SCN9A-201ENST00000303354 FGF13Q92913 245 aa7.51□□□□□ -1.21
SCN9A-201ENST00000303354 TRPV5Q9NQA5 729 aa7.51□□□□□ -1.21
SCN9A-201ENST00000303354 IGSF9Q9P2J2 1179 aa7.51□□□□□ -1.21
SCN9A-201ENST00000303354 C2orf72A6NCS6 295 aa7.51□□□□□ -1.21
SCN9A-201ENST00000303354 PIRO00625 290 aa7.51□□□□□ -1.21
SCN9A-201ENST00000303354 GABRDO14764 452 aa7.51□□□□□ -1.21
SCN9A-201ENST00000303354 CSTAP01040 98 aa7.51□□□□□ -1.21
SCN9A-201ENST00000303354 CKMT1AP12532 417 aa7.51□□□□□ -1.21
SCN9A-201ENST00000303354 DCAF12L1Q5VU92 463 aa7.51□□□□□ -1.21
SCN9A-201ENST00000303354 ERICH5Q6P6B1 374 aa7.51□□□□□ -1.21
SCN9A-201ENST00000303354 OLFML1Q6UWY5 402 aa7.51□□□□□ -1.21
SCN9A-201ENST00000303354 MARCH9Q86YJ5 346 aa7.51□□□□□ -1.21
SCN9A-201ENST00000303354 TBC1D21Q8IYX1 336 aa7.51□□□□□ -1.21
SCN9A-201ENST00000303354 NUDT22Q9BRQ3 303 aa7.51□□□□□ -1.21
SCN9A-201ENST00000303354 CD244Q9BZW8 370 aa7.51□□□□□ -1.21
SCN9A-201ENST00000303354 POLR2J2Q9GZM3 115 aaKnown RBP7.51□□□□□ -1.21
SCN9A-201ENST00000303354 A0A0A6YYC8 382 aaPredicted RBP7.51□□□□□ -1.21
SCN9A-201ENST00000303354 I3L1I5 382 aaPredicted RBP7.51□□□□□ -1.21
SCN9A-201ENST00000303354 SLC33A1O00400 549 aaPredicted RBP7.51□□□□□ -1.21
SCN9A-201ENST00000303354 PRAMEF11O60813 436 aa7.51□□□□□ -1.21
SCN9A-201ENST00000303354 LDOC1O95751 146 aaPredicted RBP7.51□□□□□ -1.21
SCN9A-201ENST00000303354 HK1P19367 917 aa7.51□□□□□ -1.21
SCN9A-201ENST00000303354 BMP8BP34820 402 aa7.51□□□□□ -1.21
SCN9A-201ENST00000303354 GRK5P34947 590 aa7.51□□□□□ -1.21
SCN9A-201ENST00000303354 PBX2P40425 430 aa7.51□□□□□ -1.21
SCN9A-201ENST00000303354 POU6F2P78424 691 aaPredicted RBP7.51□□□□□ -1.21
SCN9A-201ENST00000303354 SPANXN4Q5MJ08 99 aa7.51□□□□□ -1.21
SCN9A-201ENST00000303354 LCN1P1Q5VSP4 162 aa7.51□□□□□ -1.21
SCN9A-201ENST00000303354 BMP8AQ7Z5Y6 402 aa7.51□□□□□ -1.21
SCN9A-201ENST00000303354 LAPTM4BQ86VI4 370 aa7.51□□□□□ -1.21
SCN9A-201ENST00000303354 LGI4Q8N135 537 aa7.51□□□□□ -1.21
SCN9A-201ENST00000303354 ZNF808Q8N4W9 903 aaPredicted RBP7.51□□□□□ -1.21
SCN9A-201ENST00000303354 TMEM41AQ96HV5 264 aa7.51□□□□□ -1.21
SCN9A-201ENST00000303354 TFB2MQ9H5Q4 396 aaKnown RBP7.51□□□□□ -1.21
SCN9A-201ENST00000303354 EBF2Q9HAK2 575 aa7.51□□□□□ -1.21
SCN9A-201ENST00000303354 A0A1B0GV50 99 aa7.51□□□□□ -1.21
SCN9A-201ENST00000303354 OGNP20774 298 aaKnown RBP7.51□□□□□ -1.21
SCN9A-201ENST00000303354 MECP2P51608 486 aaKnown RBP7.51□□□□□ -1.21
SCN9A-201ENST00000303354 UBE2NP61088 152 aaKnown RBP7.51□□□□□ -1.21
SCN9A-201ENST00000303354 HERVK_113P63132 956 aa7.51□□□□□ -1.21
SCN9A-201ENST00000303354 IRF5Q13568 498 aa7.51□□□□□ -1.21
SCN9A-201ENST00000303354 TANGO2Q6ICL3 276 aa7.51□□□□□ -1.21
SCN9A-201ENST00000303354 SHFQ7M4L6 423 aa7.51□□□□□ -1.21
SCN9A-201ENST00000303354 RBM4BQ9BQ04 359 aaKnown RBP7.51□□□□□ -1.21
SCN9A-201ENST00000303354 RBM4Q9BWF3 364 aaKnown RBP7.51□□□□□ -1.21
SCN9A-201ENST00000303354 ERVK-6Q9BXR3 956 aa7.51□□□□□ -1.21
SCN9A-201ENST00000303354 NFS1Q9Y697 457 aa7.51□□□□□ -1.21
SCN9A-201ENST00000303354 FAM240BA0A1B0GVZ2 78 aa7.51□□□□□ -1.21
SCN9A-201ENST00000303354 ADAM12O43184 909 aa7.51□□□□□ -1.21
SCN9A-201ENST00000303354 IL4RP24394 825 aa7.51□□□□□ -1.21
SCN9A-201ENST00000303354 SHMT2P34897 504 aa7.51□□□□□ -1.21
SCN9A-201ENST00000303354 GGT2P36268 569 aa7.51□□□□□ -1.21
SCN9A-201ENST00000303354 HNRNPKP61978 463 aaKnown RBP eCLIP7.51□□□□□ -1.21
SCN9A-201ENST00000303354 MERTKQ12866 999 aa7.51□□□□□ -1.21
SCN9A-201ENST00000303354 ATAD3CQ5T2N8 411 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms