RNA–Protein interactions for RNA: ENST00000301599.6

TMEM88-201, Transcript of transmembrane protein 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM88, Length 875 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88-201ENST00000301599 S100BP04271 92 aaPredicted RBP17.11■□□□□ 0.33
TMEM88-201ENST00000301599 TUBBP07437 444 aa17.11■□□□□ 0.33
TMEM88-201ENST00000301599 CD46P15529 392 aa17.11■□□□□ 0.33
TMEM88-201ENST00000301599 ZNF10P21506 573 aaPredicted RBP17.11■□□□□ 0.33
TMEM88-201ENST00000301599 OR4D1Q15615 310 aa17.11■□□□□ 0.33
TMEM88-201ENST00000301599 ZKSCAN8Q15776 578 aaPredicted RBP17.11■□□□□ 0.33
TMEM88-201ENST00000301599 KBTBD12Q3ZCT8 623 aa17.11■□□□□ 0.33
TMEM88-201ENST00000301599 GFRALQ6UXV0 394 aa17.11■□□□□ 0.33
TMEM88-201ENST00000301599 RPS19BP1Q86WX3 136 aaKnown RBP17.11■□□□□ 0.33
TMEM88-201ENST00000301599 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.11■□□□□ 0.33
TMEM88-201ENST00000301599 CA13Q8N1Q1 262 aa17.11■□□□□ 0.33
TMEM88-201ENST00000301599 PPM1NQ8N819 430 aa17.11■□□□□ 0.33
TMEM88-201ENST00000301599 STAG3L4Q8TBR4 150 aa17.11■□□□□ 0.33
TMEM88-201ENST00000301599 FBXO25Q8TCJ0 367 aa17.11■□□□□ 0.33
TMEM88-201ENST00000301599 KIAA1191Q96A73 305 aa17.11■□□□□ 0.33
TMEM88-201ENST00000301599 MS4A6EQ96DS6 147 aa17.11■□□□□ 0.33
TMEM88-201ENST00000301599 NPAS2Q99743 824 aa17.11■□□□□ 0.33
TMEM88-201ENST00000301599 AICDAQ9GZX7 198 aa17.11■□□□□ 0.33
TMEM88-201ENST00000301599 PTBP2Q9UKA9 531 aaKnown RBP17.11■□□□□ 0.33
TMEM88-201ENST00000301599 RNF112Q9ULX5 631 aa17.11■□□□□ 0.33
TMEM88-201ENST00000301599 DOPEY1Q5JWR5 2465 aa17.1■□□□□ 0.33
TMEM88-201ENST00000301599 TCRBV16S1A1N1A0A5B0 115 aa17.1■□□□□ 0.33
TMEM88-201ENST00000301599 GABRR3A8MPY1 467 aa17.1■□□□□ 0.33
TMEM88-201ENST00000301599 URI1O94763 535 aaPredicted RBP17.1■□□□□ 0.33
TMEM88-201ENST00000301599 MAOAP21397 527 aa17.1■□□□□ 0.33
TMEM88-201ENST00000301599 CRABP2P29373 138 aa17.1■□□□□ 0.33
TMEM88-201ENST00000301599 STX2P32856 288 aa17.1■□□□□ 0.33
TMEM88-201ENST00000301599 HSPA7P48741 367 aa17.1■□□□□ 0.33
TMEM88-201ENST00000301599 OC90Q02509 493 aaPredicted RBP17.1■□□□□ 0.33
TMEM88-201ENST00000301599 LAPTM5Q13571 262 aa17.1■□□□□ 0.33
TMEM88-201ENST00000301599 OR1C1Q15619 314 aa17.1■□□□□ 0.33
TMEM88-201ENST00000301599 TRADDQ15628 312 aa17.1■□□□□ 0.33
TMEM88-201ENST00000301599 HIST2H2ACQ16777 129 aaPredicted RBP17.1■□□□□ 0.33
TMEM88-201ENST00000301599 XKR6Q5GH73 641 aa17.1■□□□□ 0.33
TMEM88-201ENST00000301599 HIST2H2AA3Q6FI13 130 aa17.1■□□□□ 0.33
TMEM88-201ENST00000301599 RAPH1Q70E73 1250 aa17.1■□□□□ 0.33
TMEM88-201ENST00000301599 SNX31Q8N9S9 440 aa17.1■□□□□ 0.33
TMEM88-201ENST00000301599 MDS2Q8NDY4 140 aa17.1■□□□□ 0.33
TMEM88-201ENST00000301599 FBF1Q8TES7 1133 aa17.1■□□□□ 0.33
TMEM88-201ENST00000301599 RELTQ969Z4 430 aa17.1■□□□□ 0.33
TMEM88-201ENST00000301599 ESAMQ96AP7 390 aa17.1■□□□□ 0.33
TMEM88-201ENST00000301599 PTCD3Q96EY7 689 aaKnown RBP17.1■□□□□ 0.33
TMEM88-201ENST00000301599 TMEM79Q9BSE2 394 aa17.1■□□□□ 0.33
TMEM88-201ENST00000301599 NMRAL1Q9HBL8 299 aa17.1■□□□□ 0.33
TMEM88-201ENST00000301599 NECTIN3Q9NQS3 549 aa17.1■□□□□ 0.33
TMEM88-201ENST00000301599 SEC14L3Q9UDX4 400 aa17.1■□□□□ 0.33
TMEM88-201ENST00000301599 ZNF490Q9ULM2 529 aaPredicted RBP17.1■□□□□ 0.33
TMEM88-201ENST00000301599 MMACHCQ9Y4U1 282 aa17.1■□□□□ 0.33
TMEM88-201ENST00000301599 SVILO95425 2214 aa17.09■□□□□ 0.33
TMEM88-201ENST00000301599 IGKV3D-11A0A0A0MRZ8 115 aa17.09■□□□□ 0.33
TMEM88-201ENST00000301599 C4orf51C9J302 202 aa17.09■□□□□ 0.33
TMEM88-201ENST00000301599 CLDN4O14493 209 aa17.09■□□□□ 0.33
TMEM88-201ENST00000301599 ERI3O43414 337 aaKnown RBP17.09■□□□□ 0.33
TMEM88-201ENST00000301599 B3GALT2O43825 422 aa17.09■□□□□ 0.33
TMEM88-201ENST00000301599 UNC5CO95185 931 aa17.09■□□□□ 0.33
TMEM88-201ENST00000301599 MST1P26927 711 aa17.09■□□□□ 0.33
TMEM88-201ENST00000301599 EEF1DP29692 281 aaKnown RBP17.09■□□□□ 0.33
TMEM88-201ENST00000301599 HNRNPH1P31943 449 aaKnown RBP17.09■□□□□ 0.33
TMEM88-201ENST00000301599 KCNC1P48547 511 aa17.09■□□□□ 0.33
TMEM88-201ENST00000301599 KCNK10P57789 538 aa17.09■□□□□ 0.33
TMEM88-201ENST00000301599 NAB1Q13506 487 aa17.09■□□□□ 0.33
TMEM88-201ENST00000301599 RUNX2Q13950 521 aa17.09■□□□□ 0.33
TMEM88-201ENST00000301599 DOC2AQ14183 400 aa17.09■□□□□ 0.33
TMEM88-201ENST00000301599 PDK4Q16654 411 aa17.09■□□□□ 0.33
TMEM88-201ENST00000301599 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.09■□□□□ 0.33
TMEM88-201ENST00000301599 PAGE2BQ5JRK9 111 aa17.09■□□□□ 0.33
TMEM88-201ENST00000301599 SPINK14Q6IE38 97 aa17.09■□□□□ 0.33
TMEM88-201ENST00000301599 ZNF572Q7Z3I7 529 aaPredicted RBP17.09■□□□□ 0.33
TMEM88-201ENST00000301599 CEP112Q8N8E3 955 aa17.09■□□□□ 0.33
TMEM88-201ENST00000301599 TMEM178AQ8NBL3 297 aa17.09■□□□□ 0.33
TMEM88-201ENST00000301599 PDPRQ8NCN5 879 aa17.09■□□□□ 0.33
TMEM88-201ENST00000301599 NFAM1Q8NET5 270 aaPredicted RBP17.09■□□□□ 0.33
TMEM88-201ENST00000301599 OR2L5Q8NG80 312 aa17.09■□□□□ 0.33
TMEM88-201ENST00000301599 WDR34Q96EX3 536 aa17.09■□□□□ 0.33
TMEM88-201ENST00000301599 SIGLEC12Q96PQ1 595 aa17.09■□□□□ 0.33
TMEM88-201ENST00000301599 EFCAB11Q9BUY7 163 aa17.09■□□□□ 0.33
TMEM88-201ENST00000301599 CD244Q9BZW8 370 aa17.09■□□□□ 0.33
TMEM88-201ENST00000301599 REXO4Q9GZR2 422 aaKnown RBP17.09■□□□□ 0.33
TMEM88-201ENST00000301599 ANKRD10Q9NXR5 420 aa17.09■□□□□ 0.33
TMEM88-201ENST00000301599 ZGRF1Q86YA3 2104 aa17.09■□□□□ 0.33
TMEM88-201ENST00000301599 CPAMD8Q8IZJ3 1885 aa17.08■□□□□ 0.33
TMEM88-201ENST00000301599 SAGE2PA6NJ88 616 aa17.08■□□□□ 0.32
TMEM88-201ENST00000301599 A8MUA0 341 aa17.08■□□□□ 0.32
TMEM88-201ENST00000301599 MAN1A2O60476 641 aa17.08■□□□□ 0.32
TMEM88-201ENST00000301599 CCNT2O60583 730 aaKnown RBP17.08■□□□□ 0.32
TMEM88-201ENST00000301599 FAM155BO75949 473 aa17.08■□□□□ 0.32
TMEM88-201ENST00000301599 MLYCDO95822 493 aa17.08■□□□□ 0.32
TMEM88-201ENST00000301599 COL8A1P27658 744 aa17.08■□□□□ 0.32
TMEM88-201ENST00000301599 PLA2G16P53816 162 aa17.08■□□□□ 0.32
TMEM88-201ENST00000301599 HSD17B7P56937 341 aa17.08■□□□□ 0.32
TMEM88-201ENST00000301599 IRF8Q02556 426 aa17.08■□□□□ 0.32
TMEM88-201ENST00000301599 GUCY2DQ02846 1103 aa17.08■□□□□ 0.32
TMEM88-201ENST00000301599 RBPJQ06330 500 aa17.08■□□□□ 0.32
TMEM88-201ENST00000301599 TGM3Q08188 693 aa17.08■□□□□ 0.32
TMEM88-201ENST00000301599 RCN2Q14257 317 aa17.08■□□□□ 0.32
TMEM88-201ENST00000301599 ADPRMQ3LIE5 342 aa17.08■□□□□ 0.32
TMEM88-201ENST00000301599 FBXO48Q5FWF7 155 aa17.08■□□□□ 0.32
TMEM88-201ENST00000301599 SLC25A25Q6KCM7 469 aa17.08■□□□□ 0.32
TMEM88-201ENST00000301599 TRIM40Q6P9F5 258 aa17.08■□□□□ 0.32
TMEM88-201ENST00000301599 ZDHHC24Q6UX98 284 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms