RNA–Protein interactions for RNA: ENST00000299345.10

CDH8-201, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 3,728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-201ENST00000299345 NLRP8Q86W28 1048 aa13.04□□□□□ -0.32
CDH8-201ENST00000299345 DCUN1D3Q8IWE4 304 aa13.04□□□□□ -0.32
CDH8-201ENST00000299345 DEPDC4Q8N2C3 294 aa13.04□□□□□ -0.32
CDH8-201ENST00000299345 TMIEQ8NEW7 156 aa13.04□□□□□ -0.32
CDH8-201ENST00000299345 TRUB1Q8WWH5 349 aaKnown RBP13.04□□□□□ -0.32
CDH8-201ENST00000299345 SORBS1Q9BX66 1292 aaKnown RBP13.04□□□□□ -0.32
CDH8-201ENST00000299345 DPEP2Q9H4A9 486 aa13.04□□□□□ -0.32
CDH8-201ENST00000299345 MYNNQ9NPC7 610 aa13.04□□□□□ -0.32
CDH8-201ENST00000299345 IRAK4Q9NWZ3 460 aa13.04□□□□□ -0.32
CDH8-201ENST00000299345 TMCC3Q9ULS5 477 aa13.04□□□□□ -0.32
CDH8-201ENST00000299345 PRR23AA6NEV1 266 aa13.03□□□□□ -0.32
CDH8-201ENST00000299345 SLC35G4P0C7Q5 338 aa13.03□□□□□ -0.32
CDH8-201ENST00000299345 CD36P16671 472 aa13.03□□□□□ -0.32
CDH8-201ENST00000299345 PIK3CBP42338 1070 aa13.03□□□□□ -0.32
CDH8-201ENST00000299345 VBP1P61758 197 aa13.03□□□□□ -0.32
CDH8-201ENST00000299345 TNFAIP8L2Q6P589 184 aaPredicted RBP13.03□□□□□ -0.32
CDH8-201ENST00000299345 RASGRP3Q8IV61 690 aa13.03□□□□□ -0.32
CDH8-201ENST00000299345 OR2L2Q8NH16 312 aa13.03□□□□□ -0.32
CDH8-201ENST00000299345 GEMIN6Q8WXD5 167 aaKnown RBP13.03□□□□□ -0.32
CDH8-201ENST00000299345 GTPBP3Q969Y2 492 aaKnown RBP13.03□□□□□ -0.32
CDH8-201ENST00000299345 ZHX1-C8orf76Q96EF9 292 aa13.03□□□□□ -0.32
CDH8-201ENST00000299345 C7orf34Q96L11 122 aa13.03□□□□□ -0.32
CDH8-201ENST00000299345 QRFPRQ96P65 431 aa13.03□□□□□ -0.32
CDH8-201ENST00000299345 SGPP1Q9BX95 441 aa13.03□□□□□ -0.32
CDH8-201ENST00000299345 ARMC7Q9H6L4 198 aa13.03□□□□□ -0.32
CDH8-201ENST00000299345 PLXNA4Q9HCM2 1894 aa13.03□□□□□ -0.32
CDH8-201ENST00000299345 PADI2Q9Y2J8 665 aa13.03□□□□□ -0.32
CDH8-201ENST00000299345 AP1M2Q9Y6Q5 423 aa13.03□□□□□ -0.32
CDH8-201ENST00000299345 RTCAO00442 366 aaKnown RBP13.03□□□□□ -0.32
CDH8-201ENST00000299345 IFNW1P05000 195 aa13.03□□□□□ -0.32
CDH8-201ENST00000299345 KRT20P35900 424 aa13.03□□□□□ -0.32
CDH8-201ENST00000299345 DSTNP60981 165 aa13.03□□□□□ -0.32
CDH8-201ENST00000299345 FPGSQ05932 587 aa13.03□□□□□ -0.32
CDH8-201ENST00000299345 GANABQ14697 944 aaKnown RBP13.03□□□□□ -0.32
CDH8-201ENST00000299345 SYT16Q17RD7 645 aa13.03□□□□□ -0.32
CDH8-201ENST00000299345 Q6ZPB1 254 aaPredicted RBP13.03□□□□□ -0.32
CDH8-201ENST00000299345 ZNF765Q7L2R6 523 aa13.03□□□□□ -0.32
CDH8-201ENST00000299345 HEATR4Q86WZ0 1026 aa13.03□□□□□ -0.32
CDH8-201ENST00000299345 LAS2Q8IYD9 372 aa13.03□□□□□ -0.32
CDH8-201ENST00000299345 METTL4Q8N3J2 472 aa13.03□□□□□ -0.32
CDH8-201ENST00000299345 BADQ92934 168 aa13.03□□□□□ -0.32
CDH8-201ENST00000299345 NDUFAF4Q9P032 175 aa13.03□□□□□ -0.32
CDH8-201ENST00000299345 GULP1Q9UBP9 304 aa13.03□□□□□ -0.32
CDH8-201ENST00000299345 GPR34Q9UPC5 381 aa13.03□□□□□ -0.32
CDH8-201ENST00000299345 POFUT2Q9Y2G5 429 aa13.03□□□□□ -0.32
CDH8-201ENST00000299345 C17orf113A0A1B0GUU1 675 aa13.03□□□□□ -0.32
CDH8-201ENST00000299345 TRBC2A0A5B9 178 aa13.03□□□□□ -0.32
CDH8-201ENST00000299345 GADD45GO95257 159 aa13.03□□□□□ -0.32
CDH8-201ENST00000299345 GPC1P35052 558 aa13.03□□□□□ -0.32
CDH8-201ENST00000299345 PSMD7P51665 324 aa13.03□□□□□ -0.32
CDH8-201ENST00000299345 ZNF234Q14588 700 aa13.03□□□□□ -0.32
CDH8-201ENST00000299345 EXOC3L2Q2M3D2 409 aa13.03□□□□□ -0.32
CDH8-201ENST00000299345 UNC5DQ6UXZ4 953 aa13.03□□□□□ -0.32
CDH8-201ENST00000299345 PRSS48Q7RTY5 328 aa13.03□□□□□ -0.32
CDH8-201ENST00000299345 ZNF554Q86TJ5 538 aa13.03□□□□□ -0.32
CDH8-201ENST00000299345 PROX1Q92786 737 aa13.03□□□□□ -0.32
CDH8-201ENST00000299345 MTERF3Q96E29 417 aa13.03□□□□□ -0.32
CDH8-201ENST00000299345 LRRC3BQ96PB8 259 aa13.03□□□□□ -0.32
CDH8-201ENST00000299345 ZNF300Q96RE9 604 aaPredicted RBP13.03□□□□□ -0.32
CDH8-201ENST00000299345 ROGDIQ9GZN7 287 aa13.03□□□□□ -0.32
CDH8-201ENST00000299345 SPNS1Q9H2V7 528 aa13.03□□□□□ -0.32
CDH8-201ENST00000299345 SIRT5Q9NXA8 310 aa13.03□□□□□ -0.32
CDH8-201ENST00000299345 TANC1Q9C0D5 1861 aa13.03□□□□□ -0.32
CDH8-201ENST00000299345 HOXC11O43248 304 aaPredicted RBP13.02□□□□□ -0.32
CDH8-201ENST00000299345 JUNDP17535 347 aa13.02□□□□□ -0.32
CDH8-201ENST00000299345 WASP42768 502 aa13.02□□□□□ -0.32
CDH8-201ENST00000299345 CTSKP43235 329 aa13.02□□□□□ -0.32
CDH8-201ENST00000299345 NUDT6P53370 316 aa13.02□□□□□ -0.32
CDH8-201ENST00000299345 AQP6Q13520 282 aa13.02□□□□□ -0.32
CDH8-201ENST00000299345 HEPACAMQ14CZ8 416 aa13.02□□□□□ -0.32
CDH8-201ENST00000299345 EIF4HQ15056 248 aaKnown RBP13.02□□□□□ -0.32
CDH8-201ENST00000299345 PRSS36Q5K4E3 855 aa13.02□□□□□ -0.32
CDH8-201ENST00000299345 C9orf64Q5T6V5 341 aa13.02□□□□□ -0.32
CDH8-201ENST00000299345 CEACAM20Q6UY09 585 aa13.02□□□□□ -0.32
CDH8-201ENST00000299345 LRRTM4Q86VH4 590 aa13.02□□□□□ -0.32
CDH8-201ENST00000299345 ARMC8Q8IUR7 673 aa13.02□□□□□ -0.32
CDH8-201ENST00000299345 EXOSC8Q96B26 276 aaKnown RBP13.02□□□□□ -0.32
CDH8-201ENST00000299345 C11orf24Q96F05 449 aaPredicted RBP13.02□□□□□ -0.32
CDH8-201ENST00000299345 RHNO1Q9BSD3 238 aa13.02□□□□□ -0.32
CDH8-201ENST00000299345 SLC6A16Q9GZN6 736 aa13.02□□□□□ -0.32
CDH8-201ENST00000299345 DAPK2Q9UIK4 370 aa13.02□□□□□ -0.32
CDH8-201ENST00000299345 FBXO10Q9UK96 956 aa13.02□□□□□ -0.32
CDH8-201ENST00000299345 SLC27A6Q9Y2P4 619 aa13.02□□□□□ -0.32
CDH8-201ENST00000299345 LYVE1Q9Y5Y7 322 aa13.02□□□□□ -0.32
CDH8-201ENST00000299345 PCDHGA12O60330 932 aa13.02□□□□□ -0.33
CDH8-201ENST00000299345 HSMCR30P0CW71 290 aa13.02□□□□□ -0.33
CDH8-201ENST00000299345 OPRL1P41146 370 aa13.02□□□□□ -0.33
CDH8-201ENST00000299345 HSPB3Q12988 150 aa13.02□□□□□ -0.33
CDH8-201ENST00000299345 TP53BP2Q13625 1128 aa13.02□□□□□ -0.33
CDH8-201ENST00000299345 PERM1Q5SV97 790 aa13.02□□□□□ -0.33
CDH8-201ENST00000299345 FAM46CQ5VWP2 391 aa13.02□□□□□ -0.33
CDH8-201ENST00000299345 FAHD1Q6P587 224 aa13.02□□□□□ -0.33
CDH8-201ENST00000299345 F2RL3Q96RI0 385 aa13.02□□□□□ -0.33
CDH8-201ENST00000299345 WDR12Q9GZL7 423 aaKnown RBP13.02□□□□□ -0.33
CDH8-201ENST00000299345 SPATA7Q9P0W8 599 aa13.02□□□□□ -0.33
CDH8-201ENST00000299345 ENOPH1Q9UHY7 261 aa13.02□□□□□ -0.33
CDH8-201ENST00000299345 CDC42P60953 191 aa13.02□□□□□ -0.33
CDH8-201ENST00000299345 FAM71E1Q6IPT2 247 aa13.02□□□□□ -0.33
CDH8-201ENST00000299345 YAF2Q8IY57 180 aa13.02□□□□□ -0.33
CDH8-201ENST00000299345 KLHDC8AQ8IYD2 350 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms