RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 PMS2CLQ68D20 193 aa15.58■□□□□ 0.08
TPM1-201ENST00000267996 MRM1Q6IN84 353 aaKnown RBP15.58■□□□□ 0.08
TPM1-201ENST00000267996 CYP2R1Q6VVX0 501 aa15.58■□□□□ 0.08
TPM1-201ENST00000267996 LRRC74BQ6ZQY2 392 aa15.58■□□□□ 0.08
TPM1-201ENST00000267996 GPR155Q7Z3F1 870 aa15.58■□□□□ 0.08
TPM1-201ENST00000267996 ASPGQ86U10 573 aa15.58■□□□□ 0.08
TPM1-201ENST00000267996 C11orf74Q86VG3 221 aa15.58■□□□□ 0.08
TPM1-201ENST00000267996 ZNF761Q86XN6 746 aaPredicted RBP15.58■□□□□ 0.08
TPM1-201ENST00000267996 MAML2Q8IZL2 1156 aaPredicted RBP15.58■□□□□ 0.08
TPM1-201ENST00000267996 ZCCHC7Q8N3Z6 543 aaKnown RBP15.58■□□□□ 0.08
TPM1-201ENST00000267996 FAM47BQ8NA70 645 aa15.58■□□□□ 0.08
TPM1-201ENST00000267996 RSC1A1Q92681 617 aa15.58■□□□□ 0.08
TPM1-201ENST00000267996 AURKBQ96GD4 344 aaPredicted RBP15.58■□□□□ 0.08
TPM1-201ENST00000267996 RSRC1Q96IZ7 334 aaKnown RBP15.58■□□□□ 0.08
TPM1-201ENST00000267996 LRGUKQ96M69 825 aa15.58■□□□□ 0.08
TPM1-201ENST00000267996 KCNC2Q96PR1 638 aa15.58■□□□□ 0.08
TPM1-201ENST00000267996 MACROD1Q9BQ69 325 aa15.58■□□□□ 0.08
TPM1-201ENST00000267996 C17orf62Q9BQA9 187 aa15.58■□□□□ 0.08
TPM1-201ENST00000267996 TBCDQ9BTW9 1192 aa15.58■□□□□ 0.08
TPM1-201ENST00000267996 POMT2Q9UKY4 750 aa15.58■□□□□ 0.08
TPM1-201ENST00000267996 TP53BP1Q12888 1972 aaPredicted RBP15.58■□□□□ 0.08
TPM1-201ENST00000267996 C1orf226A1L170 272 aa15.57■□□□□ 0.08
TPM1-201ENST00000267996 ERI3O43414 337 aaKnown RBP15.57■□□□□ 0.08
TPM1-201ENST00000267996 LAMTOR5O43504 91 aa15.57■□□□□ 0.08
TPM1-201ENST00000267996 SCELO95171 688 aa15.57■□□□□ 0.08
TPM1-201ENST00000267996 ANP32DO95626 131 aa15.57■□□□□ 0.08
TPM1-201ENST00000267996 ANXA6P08133 673 aa15.57■□□□□ 0.08
TPM1-201ENST00000267996 ATP5A1P25705 553 aaKnown RBP15.57■□□□□ 0.08
TPM1-201ENST00000267996 SSR2P43308 183 aa15.57■□□□□ 0.08
TPM1-201ENST00000267996 STXBP1P61764 594 aaKnown RBP15.57■□□□□ 0.08
TPM1-201ENST00000267996 HEPACAMQ14CZ8 416 aa15.57■□□□□ 0.08
TPM1-201ENST00000267996 TEAD4Q15561 434 aa15.57■□□□□ 0.08
TPM1-201ENST00000267996 AASDHQ4L235 1098 aaPredicted RBP15.57■□□□□ 0.08
TPM1-201ENST00000267996 LYSMD4Q5XG99 296 aa15.57■□□□□ 0.08
TPM1-201ENST00000267996 PROSER1Q86XN7 944 aa15.57■□□□□ 0.08
TPM1-201ENST00000267996 TICAM1Q8IUC6 712 aa15.57■□□□□ 0.08
TPM1-201ENST00000267996 MMP21Q8N119 569 aa15.57■□□□□ 0.08
TPM1-201ENST00000267996 NATD1Q8N6N6 113 aa15.57■□□□□ 0.08
TPM1-201ENST00000267996 OR10A6Q8NH74 314 aa15.57■□□□□ 0.08
TPM1-201ENST00000267996 GAB3Q8WWW8 586 aa15.57■□□□□ 0.08
TPM1-201ENST00000267996 SLCO4A1Q96BD0 722 aa15.57■□□□□ 0.08
TPM1-201ENST00000267996 FCRL4Q96PJ5 515 aa15.57■□□□□ 0.08
TPM1-201ENST00000267996 UCKL1Q9NWZ5 548 aa15.57■□□□□ 0.08
TPM1-201ENST00000267996 MAGEL2Q9UJ55 1249 aa15.57■□□□□ 0.08
TPM1-201ENST00000267996 CSNK1G3Q9Y6M4 447 aa15.57■□□□□ 0.08
TPM1-201ENST00000267996 CACNA1EQ15878 2313 aa15.57■□□□□ 0.08
TPM1-201ENST00000267996 SDK1Q7Z5N4 2213 aa15.57■□□□□ 0.08
TPM1-201ENST00000267996 A0A1B0GTW7 788 aa15.57■□□□□ 0.08
TPM1-201ENST00000267996 A0A1B0GVT2 93 aa15.57■□□□□ 0.08
TPM1-201ENST00000267996 FAM220BPB1ANY3 271 aa15.57■□□□□ 0.08
TPM1-201ENST00000267996 CLIC1O00299 241 aa15.57■□□□□ 0.08
TPM1-201ENST00000267996 CPSF4O95639 269 aaKnown RBP15.57■□□□□ 0.08
TPM1-201ENST00000267996 STATHP02808 62 aa15.57■□□□□ 0.08
TPM1-201ENST00000267996 SMIM10L1P0DMW3 83 aa15.57■□□□□ 0.08
TPM1-201ENST00000267996 GPX2P18283 190 aa15.57■□□□□ 0.08
TPM1-201ENST00000267996 HIST1H1TP22492 207 aaPredicted RBP15.57■□□□□ 0.08
TPM1-201ENST00000267996 SLC7A1P30825 629 aa15.57■□□□□ 0.08
TPM1-201ENST00000267996 SESN3P58005 492 aa15.57■□□□□ 0.08
TPM1-201ENST00000267996 BNC1Q01954 994 aa15.57■□□□□ 0.08
TPM1-201ENST00000267996 RGS1Q08116 209 aa15.57■□□□□ 0.08
TPM1-201ENST00000267996 ABHD18Q0P651 414 aa15.57■□□□□ 0.08
TPM1-201ENST00000267996 TRIM40Q6P9F5 258 aa15.57■□□□□ 0.08
TPM1-201ENST00000267996 KLHL35Q6PF15 583 aa15.57■□□□□ 0.08
TPM1-201ENST00000267996 ZNF621Q6ZSS3 439 aa15.57■□□□□ 0.08
TPM1-201ENST00000267996 RNF44Q7L0R7 432 aa15.57■□□□□ 0.08
TPM1-201ENST00000267996 SPPL2CQ8IUH8 684 aa15.57■□□□□ 0.08
TPM1-201ENST00000267996 PQLC1Q8N2U9 271 aa15.57■□□□□ 0.08
TPM1-201ENST00000267996 DTWD1Q8N5C7 304 aa15.57■□□□□ 0.08
TPM1-201ENST00000267996 OR2T12Q8NG77 320 aa15.57■□□□□ 0.08
TPM1-201ENST00000267996 GAL3ST3Q96A11 431 aa15.57■□□□□ 0.08
TPM1-201ENST00000267996 SMIM10Q96HG1 83 aa15.57■□□□□ 0.08
TPM1-201ENST00000267996 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.57■□□□□ 0.08
TPM1-201ENST00000267996 PIF1Q9H611 641 aa15.57■□□□□ 0.08
TPM1-201ENST00000267996 MIEF1Q9NQG6 463 aa15.57■□□□□ 0.08
TPM1-201ENST00000267996 TAS2R7Q9NYW3 318 aa15.57■□□□□ 0.08
TPM1-201ENST00000267996 C6orf203Q9P0P8 240 aaPredicted RBP15.57■□□□□ 0.08
TPM1-201ENST00000267996 ASB4Q9Y574 426 aa15.57■□□□□ 0.08
TPM1-201ENST00000267996 TNRC6BQ9UPQ9 1833 aaKnown RBP15.56■□□□□ 0.08
TPM1-201ENST00000267996 A0A0G2JN53 185 aa15.56■□□□□ 0.08
TPM1-201ENST00000267996 TCRBV5S2A0A599 114 aa15.56■□□□□ 0.08
TPM1-201ENST00000267996 UBXN7O94888 489 aa15.56■□□□□ 0.08
TPM1-201ENST00000267996 EPN2O95208 641 aa15.56■□□□□ 0.08
TPM1-201ENST00000267996 FAM58BPP0C7Q3 252 aa15.56■□□□□ 0.08
TPM1-201ENST00000267996 DRD2P14416 443 aa15.56■□□□□ 0.08
TPM1-201ENST00000267996 PVRP15151 417 aa15.56■□□□□ 0.08
TPM1-201ENST00000267996 TYRP1P17643 537 aa15.56■□□□□ 0.08
TPM1-201ENST00000267996 ENGP17813 658 aa15.56■□□□□ 0.08
TPM1-201ENST00000267996 DDX5P17844 614 aaKnown RBP15.56■□□□□ 0.08
TPM1-201ENST00000267996 GGT1P19440 569 aa15.56■□□□□ 0.08
TPM1-201ENST00000267996 EFNA1P20827 205 aaPredicted RBP15.56■□□□□ 0.08
TPM1-201ENST00000267996 VHLP40337 213 aa15.56■□□□□ 0.08
TPM1-201ENST00000267996 RXRGP48443 463 aa15.56■□□□□ 0.08
TPM1-201ENST00000267996 PPP1CAP62136 330 aa15.56■□□□□ 0.08
TPM1-201ENST00000267996 TGM3Q08188 693 aa15.56■□□□□ 0.08
TPM1-201ENST00000267996 DEFB133Q30KQ1 61 aa15.56■□□□□ 0.08
TPM1-201ENST00000267996 C14orf28Q4W4Y0 310 aa15.56■□□□□ 0.08
TPM1-201ENST00000267996 ARMC6Q6NXE6 501 aa15.56■□□□□ 0.08
TPM1-201ENST00000267996 ZNF551Q7Z340 670 aaPredicted RBP15.56■□□□□ 0.08
TPM1-201ENST00000267996 ZNF438Q7Z4V0 828 aa15.56■□□□□ 0.08
TPM1-201ENST00000267996 C1orf210Q8IVY1 113 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms