RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 SNRPD1P62314 119 aaKnown RBP16.1■□□□□ 0.17
SQLE-201ENST00000265896 TCEA2Q15560 299 aa16.1■□□□□ 0.17
SQLE-201ENST00000265896 ARSIQ5FYB1 569 aa16.1■□□□□ 0.17
SQLE-201ENST00000265896 SPANXN2Q5MJ10 180 aa16.1■□□□□ 0.17
SQLE-201ENST00000265896 C22orf39Q6P5X5 142 aa16.1■□□□□ 0.17
SQLE-201ENST00000265896 BRAT1Q6PJG6 821 aa16.1■□□□□ 0.17
SQLE-201ENST00000265896 TMIGD1Q6UXZ0 262 aa16.1■□□□□ 0.17
SQLE-201ENST00000265896 C11orf96Q7Z7L8 435 aa16.1■□□□□ 0.17
SQLE-201ENST00000265896 UCN3Q969E3 161 aa16.1■□□□□ 0.17
SQLE-201ENST00000265896 MYDGFQ969H8 173 aa16.1■□□□□ 0.17
SQLE-201ENST00000265896 TMEM159Q96B96 161 aa16.1■□□□□ 0.17
SQLE-201ENST00000265896 CEP44Q9C0F1 390 aa16.1■□□□□ 0.17
SQLE-201ENST00000265896 FAM83DQ9H4H8 585 aa16.1■□□□□ 0.17
SQLE-201ENST00000265896 MALT1Q9UDY8 824 aa16.1■□□□□ 0.17
SQLE-201ENST00000265896 MUTYHQ9UIF7 546 aa16.1■□□□□ 0.17
SQLE-201ENST00000265896 RUVBL1Q9Y265 456 aaKnown RBP16.1■□□□□ 0.17
SQLE-201ENST00000265896 YARS2Q9Y2Z4 477 aaKnown RBP16.1■□□□□ 0.17
SQLE-201ENST00000265896 TRBV4-1A0A0J9YWV2 114 aa16.1■□□□□ 0.17
SQLE-201ENST00000265896 C1orf226A1L170 272 aa16.1■□□□□ 0.17
SQLE-201ENST00000265896 CLDN24A6NM45 220 aa16.1■□□□□ 0.17
SQLE-201ENST00000265896 ARHGAP33O14559 1287 aa16.1■□□□□ 0.17
SQLE-201ENST00000265896 AOC2O75106 756 aa16.1■□□□□ 0.17
SQLE-201ENST00000265896 ENTPD6O75354 484 aa16.1■□□□□ 0.17
SQLE-201ENST00000265896 GPX5O75715 221 aa16.1■□□□□ 0.17
SQLE-201ENST00000265896 URODP06132 367 aa16.1■□□□□ 0.17
SQLE-201ENST00000265896 ALPPL2P10696 532 aa16.1■□□□□ 0.17
SQLE-201ENST00000265896 ZNF8P17098 575 aaPredicted RBP16.1■□□□□ 0.17
SQLE-201ENST00000265896 ELAVL2Q12926 359 aaKnown RBP16.1■□□□□ 0.17
SQLE-201ENST00000265896 GRIN2CQ14957 1233 aa16.1■□□□□ 0.17
SQLE-201ENST00000265896 ABI3BPQ7Z7G0 1075 aa16.1■□□□□ 0.17
SQLE-201ENST00000265896 SCAIQ8N9R8 606 aa16.1■□□□□ 0.17
SQLE-201ENST00000265896 GPR151Q8TDV0 419 aa16.1■□□□□ 0.17
SQLE-201ENST00000265896 TTYH2Q9BSA4 534 aa16.1■□□□□ 0.17
SQLE-201ENST00000265896 PRR14Q9BWN1 585 aa16.1■□□□□ 0.17
SQLE-201ENST00000265896 MMP27Q9H306 513 aa16.1■□□□□ 0.17
SQLE-201ENST00000265896 ZNF556Q9HAH1 456 aa16.1■□□□□ 0.17
SQLE-201ENST00000265896 SGTAO43765 313 aa16.09■□□□□ 0.17
SQLE-201ENST00000265896 C8GP07360 202 aa16.09■□□□□ 0.17
SQLE-201ENST00000265896 TNNI3P19429 210 aa16.09■□□□□ 0.17
SQLE-201ENST00000265896 IMPA1P29218 277 aa16.09■□□□□ 0.17
SQLE-201ENST00000265896 CASP3P42574 277 aa16.09■□□□□ 0.17
SQLE-201ENST00000265896 DEF8Q6ZN54 512 aa16.09■□□□□ 0.17
SQLE-201ENST00000265896 USP43Q70EL4 1123 aa16.09■□□□□ 0.17
SQLE-201ENST00000265896 SHFQ7M4L6 423 aa16.09■□□□□ 0.17
SQLE-201ENST00000265896 COMMD6Q7Z4G1 85 aa16.09■□□□□ 0.17
SQLE-201ENST00000265896 LAX1Q8IWV1 398 aa16.09■□□□□ 0.17
SQLE-201ENST00000265896 CFAP206Q8IYR0 622 aa16.09■□□□□ 0.17
SQLE-201ENST00000265896 VPS37AQ8NEZ2 397 aa16.09■□□□□ 0.17
SQLE-201ENST00000265896 TRIOO75962 3097 aa16.09■□□□□ 0.17
SQLE-201ENST00000265896 SPTBN5Q9NRC6 3674 aaKnown RBP16.09■□□□□ 0.17
SQLE-201ENST00000265896 TRBC2A0A5B9 178 aa16.09■□□□□ 0.17
SQLE-201ENST00000265896 ANTXRLA6NF34 631 aa16.09■□□□□ 0.17
SQLE-201ENST00000265896 LEFTY1O75610 366 aa16.09■□□□□ 0.17
SQLE-201ENST00000265896 SLBPQ14493 270 aaKnown RBP eCLIP16.09■□□□□ 0.17
SQLE-201ENST00000265896 RASGEF1AQ8N9B8 481 aa16.09■□□□□ 0.17
SQLE-201ENST00000265896 DTX3Q8N9I9 347 aa16.09■□□□□ 0.17
SQLE-201ENST00000265896 OR8J2Q8NGG1 315 aa16.09■□□□□ 0.17
SQLE-201ENST00000265896 CD99L2Q8TCZ2 262 aa16.09■□□□□ 0.17
SQLE-201ENST00000265896 IPCEF1Q8WWN9 437 aaPredicted RBP16.09■□□□□ 0.17
SQLE-201ENST00000265896 SIGLEC11Q96RL6 698 aa16.09■□□□□ 0.17
SQLE-201ENST00000265896 SMAD5Q99717 465 aaKnown RBP16.09■□□□□ 0.17
SQLE-201ENST00000265896 NEK6Q9HC98 313 aa16.09■□□□□ 0.17
SQLE-201ENST00000265896 PLSCR3Q9NRY6 295 aa16.09■□□□□ 0.17
SQLE-201ENST00000265896 FAM120CQ9NX05 1096 aaKnown RBP16.09■□□□□ 0.17
SQLE-201ENST00000265896 TBC1D14Q9P2M4 693 aa16.09■□□□□ 0.17
SQLE-201ENST00000265896 GFYI3L273 518 aa16.08■□□□□ 0.17
SQLE-201ENST00000265896 K7ESM1 405 aa16.08■□□□□ 0.17
SQLE-201ENST00000265896 GADD45GO95257 159 aa16.08■□□□□ 0.17
SQLE-201ENST00000265896 CLEC2LP0C7M8 214 aa16.08■□□□□ 0.17
SQLE-201ENST00000265896 CHMP24386 653 aa16.08■□□□□ 0.17
SQLE-201ENST00000265896 RPS19P39019 145 aaKnown RBP16.08■□□□□ 0.17
SQLE-201ENST00000265896 MVDP53602 400 aa16.08■□□□□ 0.17
SQLE-201ENST00000265896 TMEM220Q6QAJ8 160 aa16.08■□□□□ 0.17
SQLE-201ENST00000265896 ZFP41Q8N8Y5 198 aa16.08■□□□□ 0.17
SQLE-201ENST00000265896 ASZ1Q8WWH4 475 aa16.08■□□□□ 0.17
SQLE-201ENST00000265896 CLP1Q92989 425 aaKnown RBP16.08■□□□□ 0.17
SQLE-201ENST00000265896 TMEM169Q96HH4 297 aa16.08■□□□□ 0.17
SQLE-201ENST00000265896 TRNT1Q96Q11 434 aaKnown RBP16.08■□□□□ 0.17
SQLE-201ENST00000265896 RSPO3Q9BXY4 272 aaPredicted RBP16.08■□□□□ 0.17
SQLE-201ENST00000265896 ABCB9Q9NP78 766 aa16.08■□□□□ 0.17
SQLE-201ENST00000265896 FBXL12Q9NXK8 326 aa16.08■□□□□ 0.17
SQLE-201ENST00000265896 CARD8Q9Y2G2 431 aa16.08■□□□□ 0.17
SQLE-201ENST00000265896 INSL5Q9Y5Q6 135 aa16.08■□□□□ 0.17
SQLE-201ENST00000265896 HCFC2Q9Y5Z7 792 aa16.08■□□□□ 0.17
SQLE-201ENST00000265896 CA12O43570 354 aa16.08■□□□□ 0.16
SQLE-201ENST00000265896 NUAK1O60285 661 aa16.08■□□□□ 0.16
SQLE-201ENST00000265896 DNAJB5O75953 348 aa16.08■□□□□ 0.16
SQLE-201ENST00000265896 CDK6Q00534 326 aa16.08■□□□□ 0.16
SQLE-201ENST00000265896 SSX1Q16384 188 aa16.08■□□□□ 0.16
SQLE-201ENST00000265896 IFI44LQ53G44 452 aa16.08■□□□□ 0.16
SQLE-201ENST00000265896 LIPKQ5VXJ0 399 aa16.08■□□□□ 0.16
SQLE-201ENST00000265896 RAET1EQ8TD07 263 aa16.08■□□□□ 0.16
SQLE-201ENST00000265896 PITX2Q99697 317 aa16.08■□□□□ 0.16
SQLE-201ENST00000265896 NDEL1Q9GZM8 345 aa16.08■□□□□ 0.16
SQLE-201ENST00000265896 IL21Q9HBE4 155 aa16.08■□□□□ 0.16
SQLE-201ENST00000265896 MRPL17Q9NRX2 175 aaKnown RBP16.08■□□□□ 0.16
SQLE-201ENST00000265896 LSM7Q9UK45 103 aaKnown RBP16.08■□□□□ 0.16
SQLE-201ENST00000265896 TMED5Q9Y3A6 229 aa16.08■□□□□ 0.16
SQLE-201ENST00000265896 UGT2A1Q9Y4X1 527 aa16.08■□□□□ 0.16
SQLE-201ENST00000265896 ANKDD1BA6NHY2 528 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms