RNA–Protein interactions for RNA: ENST00000264709.7

DNMT3A-201, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 9,501 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-201ENST00000264709 TRIM23P36406 574 aa11.28□□□□□ -0.6
DNMT3A-201ENST00000264709 GBX2P52951 348 aaPredicted RBP11.28□□□□□ -0.6
DNMT3A-201ENST00000264709 WNT4P56705 351 aa11.28□□□□□ -0.6
DNMT3A-201ENST00000264709 RAP2BP61225 183 aa11.28□□□□□ -0.6
DNMT3A-201ENST00000264709 RING1Q06587 406 aa11.28□□□□□ -0.6
DNMT3A-201ENST00000264709 LRRC26Q2I0M4 334 aa11.28□□□□□ -0.6
DNMT3A-201ENST00000264709 LIPJQ5W064 366 aa11.28□□□□□ -0.6
DNMT3A-201ENST00000264709 VN1R5Q7Z5H4 357 aa11.28□□□□□ -0.6
DNMT3A-201ENST00000264709 SVBPQ8N300 66 aa11.28□□□□□ -0.6
DNMT3A-201ENST00000264709 OR56A1Q8NGH5 318 aa11.28□□□□□ -0.6
DNMT3A-201ENST00000264709 UQCC2Q9BRT2 126 aa11.28□□□□□ -0.6
DNMT3A-201ENST00000264709 TSSK6Q9BXA6 273 aa11.28□□□□□ -0.6
DNMT3A-201ENST00000264709 EMC7Q9NPA0 242 aa11.28□□□□□ -0.6
DNMT3A-201ENST00000264709 FKBP7Q9Y680 259 aa11.28□□□□□ -0.6
DNMT3A-201ENST00000264709 PCGF2P35227 344 aa11.28□□□□□ -0.6
DNMT3A-201ENST00000264709 FAM69AQ5T7M9 428 aa11.28□□□□□ -0.6
DNMT3A-201ENST00000264709 RAP1GAP2Q684P5 730 aa11.28□□□□□ -0.6
DNMT3A-201ENST00000264709 AKIP1Q9NQ31 210 aa11.28□□□□□ -0.6
DNMT3A-201ENST00000264709 PDLIM7Q9NR12 457 aa11.28□□□□□ -0.6
DNMT3A-201ENST00000264709 TREX1Q9NSU2 369 aa11.28□□□□□ -0.6
DNMT3A-201ENST00000264709 NLGN3Q9NZ94 848 aa11.28□□□□□ -0.6
DNMT3A-201ENST00000264709 ZNF780BQ9Y6R6 833 aa11.28□□□□□ -0.6
DNMT3A-201ENST00000264709 APOC1P02654 83 aa11.28□□□□□ -0.6
DNMT3A-201ENST00000264709 SDR16C5Q8N3Y7 309 aa11.28□□□□□ -0.6
DNMT3A-201ENST00000264709 SLC6A16Q9GZN6 736 aa11.28□□□□□ -0.6
DNMT3A-201ENST00000264709 TMPRSS4Q9NRS4 437 aa11.28□□□□□ -0.6
DNMT3A-201ENST00000264709 TBC1D24Q9ULP9 559 aa11.28□□□□□ -0.6
DNMT3A-201ENST00000264709 ALG5Q9Y673 324 aa11.28□□□□□ -0.6
DNMT3A-201ENST00000264709 SVILO95425 2214 aa11.28□□□□□ -0.6
DNMT3A-201ENST00000264709 PCDH7O60245 1069 aa11.28□□□□□ -0.6
DNMT3A-201ENST00000264709 LINGO2Q7L985 606 aa11.28□□□□□ -0.6
DNMT3A-201ENST00000264709 NUDT13Q86X67 352 aa11.28□□□□□ -0.6
DNMT3A-201ENST00000264709 METTL4Q8N3J2 472 aa11.28□□□□□ -0.6
DNMT3A-201ENST00000264709 SGTBQ96EQ0 304 aa11.28□□□□□ -0.6
DNMT3A-201ENST00000264709 NELL2Q99435 816 aa11.28□□□□□ -0.6
DNMT3A-201ENST00000264709 BCKDHAP12694 445 aa11.28□□□□□ -0.6
DNMT3A-201ENST00000264709 ITGA3P26006 1051 aa11.28□□□□□ -0.6
DNMT3A-201ENST00000264709 ACTBP60709 375 aa11.28□□□□□ -0.6
DNMT3A-201ENST00000264709 ACTG1P63261 375 aa11.28□□□□□ -0.6
DNMT3A-201ENST00000264709 SLC10A7Q0GE19 358 aa11.28□□□□□ -0.6
DNMT3A-201ENST00000264709 LDB1Q86U70 411 aaPredicted RBP11.28□□□□□ -0.6
DNMT3A-201ENST00000264709 COMMD7Q86VX2 200 aa11.28□□□□□ -0.6
DNMT3A-201ENST00000264709 PELI3Q8N2H9 469 aa11.28□□□□□ -0.6
DNMT3A-201ENST00000264709 CADM2Q8N3J6 435 aa11.28□□□□□ -0.6
DNMT3A-201ENST00000264709 MTERF1Q99551 399 aaKnown RBP11.28□□□□□ -0.6
DNMT3A-201ENST00000264709 GLTPQ9NZD2 209 aa11.28□□□□□ -0.6
DNMT3A-201ENST00000264709 GALPQ9UBC7 116 aa11.28□□□□□ -0.6
DNMT3A-201ENST00000264709 ANKRD66B4E2M5 251 aa11.27□□□□□ -0.6
DNMT3A-201ENST00000264709 SOCS5O75159 536 aa11.27□□□□□ -0.6
DNMT3A-201ENST00000264709 CSF2P04141 144 aa11.27□□□□□ -0.6
DNMT3A-201ENST00000264709 IRF1P10914 325 aa11.27□□□□□ -0.6
DNMT3A-201ENST00000264709 HTR1BP28222 390 aa11.27□□□□□ -0.6
DNMT3A-201ENST00000264709 CLCC1Q96S66 551 aa11.27□□□□□ -0.6
DNMT3A-201ENST00000264709 NSUN3Q9H649 340 aaKnown RBP11.27□□□□□ -0.6
DNMT3A-201ENST00000264709 FBRSL1Q9HCM7 1045 aaKnown RBP11.27□□□□□ -0.6
DNMT3A-201ENST00000264709 FBXL21Q9UKT6 434 aa11.27□□□□□ -0.6
DNMT3A-201ENST00000264709 ANKRD36A6QL64 1941 aa11.27□□□□□ -0.6
DNMT3A-201ENST00000264709 A0A1W2PQ09 198 aa11.27□□□□□ -0.6
DNMT3A-201ENST00000264709 FLRT2O43155 660 aa11.27□□□□□ -0.6
DNMT3A-201ENST00000264709 AOC2O75106 756 aa11.27□□□□□ -0.6
DNMT3A-201ENST00000264709 TYRP14679 529 aa11.27□□□□□ -0.6
DNMT3A-201ENST00000264709 PON3Q15166 354 aa11.27□□□□□ -0.6
DNMT3A-201ENST00000264709 SH2D5Q6ZV89 423 aa11.27□□□□□ -0.6
DNMT3A-201ENST00000264709 SLC39A13Q96H72 371 aa11.27□□□□□ -0.6
DNMT3A-201ENST00000264709 HRASLS5Q96KN8 279 aa11.27□□□□□ -0.6
DNMT3A-201ENST00000264709 LGR4Q9BXB1 951 aa11.27□□□□□ -0.6
DNMT3A-201ENST00000264709 CHP2O43745 196 aa11.27□□□□□ -0.6
DNMT3A-201ENST00000264709 ZNF432O94892 652 aa11.27□□□□□ -0.6
DNMT3A-201ENST00000264709 FAPQ12884 760 aa11.27□□□□□ -0.6
DNMT3A-201ENST00000264709 FGFBP1Q14512 234 aa11.27□□□□□ -0.6
DNMT3A-201ENST00000264709 TARBP2Q15633 366 aaKnown RBP11.27□□□□□ -0.6
DNMT3A-201ENST00000264709 RANBP10Q6VN20 620 aa11.27□□□□□ -0.6
DNMT3A-201ENST00000264709 PROKR2Q8NFJ6 384 aa11.27□□□□□ -0.6
DNMT3A-201ENST00000264709 OR56B4Q8NH76 319 aa11.27□□□□□ -0.6
DNMT3A-201ENST00000264709 SLC7A6Q92536 515 aa11.27□□□□□ -0.6
DNMT3A-201ENST00000264709 PSMG2Q969U7 264 aa11.27□□□□□ -0.6
DNMT3A-201ENST00000264709 KLHL5Q96PQ7 755 aa11.27□□□□□ -0.6
DNMT3A-201ENST00000264709 OARD1Q9Y530 152 aa11.27□□□□□ -0.6
DNMT3A-201ENST00000264709 PI15O43692 258 aa11.27□□□□□ -0.61
DNMT3A-201ENST00000264709 SLC43A1O75387 559 aa11.27□□□□□ -0.61
DNMT3A-201ENST00000264709 TPPPO94811 219 aa11.27□□□□□ -0.61
DNMT3A-201ENST00000264709 BIKQ13323 160 aa11.27□□□□□ -0.61
DNMT3A-201ENST00000264709 NKAPLQ5M9Q1 402 aa11.27□□□□□ -0.61
DNMT3A-201ENST00000264709 MARCH9Q86YJ5 346 aa11.27□□□□□ -0.61
DNMT3A-201ENST00000264709 DNAJC22Q8N4W6 341 aa11.27□□□□□ -0.61
DNMT3A-201ENST00000264709 ZNF778Q96MU6 729 aa11.27□□□□□ -0.61
DNMT3A-201ENST00000264709 PELOQ9BRX2 385 aaKnown RBP11.27□□□□□ -0.61
DNMT3A-201ENST00000264709 TVP23BQ9NYZ1 205 aa11.27□□□□□ -0.61
DNMT3A-201ENST00000264709 MMP20O60882 483 aa11.27□□□□□ -0.61
DNMT3A-201ENST00000264709 UQCRC1P31930 480 aa11.27□□□□□ -0.61
DNMT3A-201ENST00000264709 C4orf46Q504U0 113 aa11.27□□□□□ -0.61
DNMT3A-201ENST00000264709 CHST9Q7L1S5 443 aa11.27□□□□□ -0.61
DNMT3A-201ENST00000264709 TAS1R3Q7RTX0 852 aa11.27□□□□□ -0.61
DNMT3A-201ENST00000264709 PIM3Q86V86 326 aa11.27□□□□□ -0.61
DNMT3A-201ENST00000264709 PTERQ96BW5 349 aa11.27□□□□□ -0.61
DNMT3A-201ENST00000264709 UBXN10Q96LJ8 280 aa11.27□□□□□ -0.61
DNMT3A-201ENST00000264709 OR6A2O95222 327 aa11.27□□□□□ -0.61
DNMT3A-201ENST00000264709 POLR2CP19387 275 aaPredicted RBP11.27□□□□□ -0.61
DNMT3A-201ENST00000264709 MLLT11Q13015 90 aaPredicted RBP11.27□□□□□ -0.61
DNMT3A-201ENST00000264709 PLEKHN1Q494U1 663 aaPredicted RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms