RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 NRSN2Q9GZP1 204 aa25.85■■□□□ 1.73
CHMP4B-201ENST00000217402 RABEP2Q9H5N1 569 aa25.85■■□□□ 1.73
CHMP4B-201ENST00000217402 AKTIPQ9H8T0 292 aa25.85■■□□□ 1.73
CHMP4B-201ENST00000217402 WASF3Q9UPY6 502 aa25.85■■□□□ 1.73
CHMP4B-201ENST00000217402 WDFY3Q8IZQ1 3526 aa25.84■■□□□ 1.73
CHMP4B-201ENST00000217402 RDH16O75452 317 aa25.84■■□□□ 1.73
CHMP4B-201ENST00000217402 EEDO75530 441 aaKnown RBP25.84■■□□□ 1.73
CHMP4B-201ENST00000217402 PRPH2P23942 346 aa25.84■■□□□ 1.73
CHMP4B-201ENST00000217402 OR1D4P47884 311 aa25.84■■□□□ 1.73
CHMP4B-201ENST00000217402 AVPR1BP47901 424 aa25.84■■□□□ 1.73
CHMP4B-201ENST00000217402 OLR1P78380 273 aa25.84■■□□□ 1.73
CHMP4B-201ENST00000217402 SPIN4Q56A73 249 aa25.84■■□□□ 1.73
CHMP4B-201ENST00000217402 EPGNQ6UW88 154 aa25.84■■□□□ 1.73
CHMP4B-201ENST00000217402 NUDT13Q86X67 352 aa25.84■■□□□ 1.73
CHMP4B-201ENST00000217402 CHTF18Q8WVB6 975 aa25.84■■□□□ 1.73
CHMP4B-201ENST00000217402 ZDHHC19Q8WVZ1 309 aaPredicted RBP25.84■■□□□ 1.73
CHMP4B-201ENST00000217402 PPP3R2Q96LZ3 170 aa25.84■■□□□ 1.73
CHMP4B-201ENST00000217402 QRFPRQ96P65 431 aa25.84■■□□□ 1.73
CHMP4B-201ENST00000217402 EBF4Q9BQW3 602 aa25.84■■□□□ 1.73
CHMP4B-201ENST00000217402 AK5Q9Y6K8 562 aa25.84■■□□□ 1.73
CHMP4B-201ENST00000217402 A0A088AWK7 358 aa25.83■■□□□ 1.73
CHMP4B-201ENST00000217402 A0A0G2JND7 137 aa25.83■■□□□ 1.73
CHMP4B-201ENST00000217402 TEX51A0A1B0GUA7 166 aa25.83■■□□□ 1.73
CHMP4B-201ENST00000217402 NSA2O95478 260 aaKnown RBP25.83■■□□□ 1.73
CHMP4B-201ENST00000217402 KLK1P06870 262 aa25.83■■□□□ 1.73
CHMP4B-201ENST00000217402 ZNF10P21506 573 aaPredicted RBP25.83■■□□□ 1.73
CHMP4B-201ENST00000217402 HIST1H1TP22492 207 aaPredicted RBP25.83■■□□□ 1.73
CHMP4B-201ENST00000217402 ATP5A1P25705 553 aaKnown RBP25.83■■□□□ 1.73
CHMP4B-201ENST00000217402 SLC5A2P31639 672 aa25.83■■□□□ 1.73
CHMP4B-201ENST00000217402 MTTPP55157 894 aa25.83■■□□□ 1.73
CHMP4B-201ENST00000217402 NXNQ6DKJ4 435 aa25.83■■□□□ 1.73
CHMP4B-201ENST00000217402 ACOT4Q8N9L9 421 aa25.83■■□□□ 1.73
CHMP4B-201ENST00000217402 GALNT6Q8NCL4 622 aa25.83■■□□□ 1.73
CHMP4B-201ENST00000217402 GBP5Q96PP8 586 aa25.83■■□□□ 1.73
CHMP4B-201ENST00000217402 EBPLQ9BY08 206 aa25.83■■□□□ 1.73
CHMP4B-201ENST00000217402 TMEM184BQ9Y519 407 aaPredicted RBP25.83■■□□□ 1.73
CHMP4B-201ENST00000217402 POLR3HQ9Y535 204 aaPredicted RBP25.83■■□□□ 1.73
CHMP4B-201ENST00000217402 IDH3AP50213 366 aa25.82■■□□□ 1.72
CHMP4B-201ENST00000217402 SLC9A5Q14940 896 aa25.82■■□□□ 1.72
CHMP4B-201ENST00000217402 TUBB8Q3ZCM7 444 aa25.82■■□□□ 1.72
CHMP4B-201ENST00000217402 RFTN2Q52LD8 501 aaPredicted RBP25.82■■□□□ 1.72
CHMP4B-201ENST00000217402 C6orf136Q5SQH8 315 aa25.82■■□□□ 1.72
CHMP4B-201ENST00000217402 ZFAND4Q86XD8 727 aa25.82■■□□□ 1.72
CHMP4B-201ENST00000217402 OR5T3Q8NGG3 340 aa25.82■■□□□ 1.72
CHMP4B-201ENST00000217402 MVB12AQ96EY5 273 aa25.82■■□□□ 1.72
CHMP4B-201ENST00000217402 OR52B2Q96RD2 323 aa25.82■■□□□ 1.72
CHMP4B-201ENST00000217402 C1orf50Q9BV19 199 aa25.82■■□□□ 1.72
CHMP4B-201ENST00000217402 ROGDIQ9GZN7 287 aa25.82■■□□□ 1.72
CHMP4B-201ENST00000217402 HCN3Q9P1Z3 774 aa25.82■■□□□ 1.72
CHMP4B-201ENST00000217402 TRABD2BA6NFA1 517 aa25.81■■□□□ 1.72
CHMP4B-201ENST00000217402 NPIPB8E9PQR5 432 aa25.81■■□□□ 1.72
CHMP4B-201ENST00000217402 NVLO15381 856 aaKnown RBP25.81■■□□□ 1.72
CHMP4B-201ENST00000217402 DNAJB6O75190 326 aa25.81■■□□□ 1.72
CHMP4B-201ENST00000217402 VPS4BO75351 444 aa25.81■■□□□ 1.72
CHMP4B-201ENST00000217402 ITGAXP20702 1163 aa25.81■■□□□ 1.72
CHMP4B-201ENST00000217402 DRD4P21917 467 aa25.81■■□□□ 1.72
CHMP4B-201ENST00000217402 RORAP35398 523 aa25.81■■□□□ 1.72
CHMP4B-201ENST00000217402 ARFIP1P53367 373 aa25.81■■□□□ 1.72
CHMP4B-201ENST00000217402 SKP1P63208 163 aa25.81■■□□□ 1.72
CHMP4B-201ENST00000217402 MAT1AQ00266 395 aaKnown RBP25.81■■□□□ 1.72
CHMP4B-201ENST00000217402 PAGE2Q7Z2X7 111 aa25.81■■□□□ 1.72
CHMP4B-201ENST00000217402 FNDC5Q8NAU1 212 aa25.81■■□□□ 1.72
CHMP4B-201ENST00000217402 PROKR1Q8TCW9 393 aa25.81■■□□□ 1.72
CHMP4B-201ENST00000217402 SERINC2Q96SA4 455 aa25.81■■□□□ 1.72
CHMP4B-201ENST00000217402 NSRP1Q9H0G5 558 aaKnown RBP25.81■■□□□ 1.72
CHMP4B-201ENST00000217402 ASCL3Q9NQ33 180 aa25.81■■□□□ 1.72
CHMP4B-201ENST00000217402 CDC14AQ9UNH5 594 aa25.81■■□□□ 1.72
CHMP4B-201ENST00000217402 SCN3AQ9NY46 2000 aa25.81■■□□□ 1.72
CHMP4B-201ENST00000217402 ARHGAP10A1A4S6 786 aa25.81■■□□□ 1.72
CHMP4B-201ENST00000217402 MEN1O00255 615 aa25.81■■□□□ 1.72
CHMP4B-201ENST00000217402 B3GALT2O43825 422 aa25.81■■□□□ 1.72
CHMP4B-201ENST00000217402 PCDH7O60245 1069 aa25.81■■□□□ 1.72
CHMP4B-201ENST00000217402 BRINP1O60477 761 aa25.81■■□□□ 1.72
CHMP4B-201ENST00000217402 TPP2P29144 1249 aaPredicted RBP25.81■■□□□ 1.72
CHMP4B-201ENST00000217402 TSFMP43897 325 aaKnown RBP25.81■■□□□ 1.72
CHMP4B-201ENST00000217402 RAE1P78406 368 aaKnown RBP25.81■■□□□ 1.72
CHMP4B-201ENST00000217402 ABHD18Q0P651 414 aa25.81■■□□□ 1.72
CHMP4B-201ENST00000217402 KIAA0040Q15053 153 aa25.81■■□□□ 1.72
CHMP4B-201ENST00000217402 CCNYL2Q5T2Q4 361 aa25.81■■□□□ 1.72
CHMP4B-201ENST00000217402 PRMT9Q6P2P2 845 aa25.81■■□□□ 1.72
CHMP4B-201ENST00000217402 LARP4Q71RC2 724 aaKnown RBP eCLIP25.81■■□□□ 1.727e-7■■■■■ 30.1
CHMP4B-201ENST00000217402 CPLX4Q7Z7G2 160 aa25.81■■□□□ 1.72
CHMP4B-201ENST00000217402 SHISA5Q8N114 240 aa25.81■■□□□ 1.72
CHMP4B-201ENST00000217402 COL26A1Q96A83 441 aa25.81■■□□□ 1.72
CHMP4B-201ENST00000217402 NXPE2Q96DL1 559 aa25.81■■□□□ 1.72
CHMP4B-201ENST00000217402 MAELQ96JY0 434 aaKnown RBP25.81■■□□□ 1.72
CHMP4B-201ENST00000217402 SIKE1Q9BRV8 207 aa25.81■■□□□ 1.72
CHMP4B-201ENST00000217402 DDX31Q9H8H2 851 aaKnown RBP25.81■■□□□ 1.72
CHMP4B-201ENST00000217402 ZNF304Q9HCX3 659 aa25.81■■□□□ 1.72
CHMP4B-201ENST00000217402 A0A0A6YYD5 115 aa25.8■■□□□ 1.72
CHMP4B-201ENST00000217402 SHOX2O60902 331 aaPredicted RBP25.8■■□□□ 1.72
CHMP4B-201ENST00000217402 PRR35P0CG20 571 aa25.8■■□□□ 1.72
CHMP4B-201ENST00000217402 FBLP22087 321 aaKnown RBP25.8■■□□□ 1.72
CHMP4B-201ENST00000217402 TIA1P31483 386 aaKnown RBP eCLIP25.8■■□□□ 1.72
CHMP4B-201ENST00000217402 RTP5Q14D33 572 aa25.8■■□□□ 1.72
CHMP4B-201ENST00000217402 SYT16Q17RD7 645 aa25.8■■□□□ 1.72
CHMP4B-201ENST00000217402 ARHGAP40Q5TG30 622 aa25.8■■□□□ 1.72
CHMP4B-201ENST00000217402 NIPAL1Q6NVV3 410 aa25.8■■□□□ 1.72
CHMP4B-201ENST00000217402 CYP20A1Q6UW02 462 aa25.8■■□□□ 1.72
CHMP4B-201ENST00000217402 ACAD11Q709F0 780 aa25.8■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms