RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 LRRC72A6NJI9 287 aa28.33■■■□□ 2.13
PABPN1-201ENST00000216727 TTC33Q6PID6 262 aaPredicted RBP28.33■■■□□ 2.13
PABPN1-201ENST00000216727 ZNF852Q6ZMS4 543 aa28.33■■■□□ 2.13
PABPN1-201ENST00000216727 HIPK1Q86Z02 1210 aa28.33■■■□□ 2.13
PABPN1-201ENST00000216727 TMEM184CQ9NVA4 438 aa28.33■■■□□ 2.13
PABPN1-201ENST00000216727 MMP17Q9ULZ9 603 aa28.33■■■□□ 2.13
PABPN1-201ENST00000216727 PAX7P23759 505 aa28.33■■■□□ 2.13
PABPN1-201ENST00000216727 GSTM2P28161 218 aa28.33■■■□□ 2.13
PABPN1-201ENST00000216727 HTR1BP28222 390 aa28.33■■■□□ 2.13
PABPN1-201ENST00000216727 RBBP4Q09028 425 aa28.33■■■□□ 2.13
PABPN1-201ENST00000216727 CCINQ13939 588 aa28.33■■■□□ 2.13
PABPN1-201ENST00000216727 RAD21L1Q9H4I0 556 aa28.33■■■□□ 2.13
PABPN1-201ENST00000216727 DDX31Q9H8H2 851 aaKnown RBP28.33■■■□□ 2.13
PABPN1-201ENST00000216727 TBC1D29Q9UFV1 150 aa28.33■■■□□ 2.13
PABPN1-201ENST00000216727 TRIM64A6NGJ6 449 aa28.32■■■□□ 2.12
PABPN1-201ENST00000216727 NDUFS1P28331 727 aa28.32■■■□□ 2.12
PABPN1-201ENST00000216727 GRK3P35626 688 aa28.32■■■□□ 2.12
PABPN1-201ENST00000216727 CRATP43155 626 aa28.32■■■□□ 2.12
PABPN1-201ENST00000216727 TUBA4AP68366 448 aa28.32■■■□□ 2.12
PABPN1-201ENST00000216727 SPESP1Q6UW49 350 aa28.32■■■□□ 2.12
PABPN1-201ENST00000216727 UBE3DQ7Z6J8 389 aa28.32■■■□□ 2.12
PABPN1-201ENST00000216727 MMP21Q8N119 569 aa28.32■■■□□ 2.12
PABPN1-201ENST00000216727 METTL25Q8N6Q8 603 aa28.32■■■□□ 2.12
PABPN1-201ENST00000216727 ABHD8Q96I13 439 aa28.32■■■□□ 2.12
PABPN1-201ENST00000216727 HSH2DQ96JZ2 352 aa28.32■■■□□ 2.12
PABPN1-201ENST00000216727 SARGQ9BW04 601 aa28.32■■■□□ 2.12
PABPN1-201ENST00000216727 ASPSCR1Q9BZE9 553 aa28.32■■■□□ 2.12
PABPN1-201ENST00000216727 TM9SF3Q9HD45 589 aa28.32■■■□□ 2.12
PABPN1-201ENST00000216727 IFT80Q9P2H3 777 aaPredicted RBP28.32■■■□□ 2.12
PABPN1-201ENST00000216727 PCOLCE2Q9UKZ9 415 aa28.32■■■□□ 2.12
PABPN1-201ENST00000216727 H0Y8X5 98 aa28.31■■■□□ 2.12
PABPN1-201ENST00000216727 TNFRSF10CO14798 259 aa28.31■■■□□ 2.12
PABPN1-201ENST00000216727 E2F6O75461 281 aa28.31■■■□□ 2.12
PABPN1-201ENST00000216727 CLIC3O95833 236 aa28.31■■■□□ 2.12
PABPN1-201ENST00000216727 POU3F3P20264 500 aaPredicted RBP28.31■■■□□ 2.12
PABPN1-201ENST00000216727 TMEM35AQ53FP2 167 aa28.31■■■□□ 2.12
PABPN1-201ENST00000216727 COX20Q5RI15 118 aa28.31■■■□□ 2.12
PABPN1-201ENST00000216727 TRIM40Q6P9F5 258 aa28.31■■■□□ 2.12
PABPN1-201ENST00000216727 PIWIL3Q7Z3Z3 882 aaKnown RBP28.31■■■□□ 2.12
PABPN1-201ENST00000216727 TMEM179BQ7Z7N9 219 aa28.31■■■□□ 2.12
PABPN1-201ENST00000216727 GALNT10Q86SR1 603 aa28.31■■■□□ 2.12
PABPN1-201ENST00000216727 OR2L3Q8NG85 312 aa28.31■■■□□ 2.12
PABPN1-201ENST00000216727 ZFP28Q8NHY6 868 aa28.31■■■□□ 2.12
PABPN1-201ENST00000216727 MAL2Q969L2 176 aa28.31■■■□□ 2.12
PABPN1-201ENST00000216727 TMEM38AQ9H6F2 299 aa28.31■■■□□ 2.12
PABPN1-201ENST00000216727 RAPGEFL1Q9UHV5 662 aa28.31■■■□□ 2.12
PABPN1-201ENST00000216727 CA5BQ9Y2D0 317 aa28.31■■■□□ 2.12
PABPN1-201ENST00000216727 PRAMEF33A0A0G2JMD5 474 aa28.31■■■□□ 2.12
PABPN1-201ENST00000216727 TCRBV21S2A2A0A5A6 115 aa28.31■■■□□ 2.12
PABPN1-201ENST00000216727 H3BQ06 376 aaPredicted RBP28.31■■■□□ 2.12
PABPN1-201ENST00000216727 SCAMP1O15126 338 aa28.31■■■□□ 2.12
PABPN1-201ENST00000216727 KRT75O95678 551 aa28.31■■■□□ 2.12
PABPN1-201ENST00000216727 FABP3P05413 133 aa28.31■■■□□ 2.12
PABPN1-201ENST00000216727 CRYBA2P53672 197 aa28.31■■■□□ 2.12
PABPN1-201ENST00000216727 TRA2BP62995 288 aaKnown RBP28.31■■■□□ 2.12
PABPN1-201ENST00000216727 OR2T5Q6IEZ7 315 aa28.31■■■□□ 2.12
PABPN1-201ENST00000216727 SHQ1Q6PI26 577 aaKnown RBP28.31■■■□□ 2.12
PABPN1-201ENST00000216727 ANGPTL8Q6UXH0 198 aa28.31■■■□□ 2.12
PABPN1-201ENST00000216727 PLD3Q8IV08 490 aa28.31■■■□□ 2.12
PABPN1-201ENST00000216727 ZNF786Q8N393 782 aa28.31■■■□□ 2.12
PABPN1-201ENST00000216727 OR2T29Q8NH02 315 aa28.31■■■□□ 2.12
PABPN1-201ENST00000216727 GRIP2Q9C0E4 1043 aa28.31■■■□□ 2.12
PABPN1-201ENST00000216727 SOX17Q9H6I2 414 aaPredicted RBP28.31■■■□□ 2.12
PABPN1-201ENST00000216727 SMURF2Q9HAU4 748 aa28.31■■■□□ 2.12
PABPN1-201ENST00000216727 SLC6A20Q9NP91 592 aa28.31■■■□□ 2.12
PABPN1-201ENST00000216727 C1GALT1Q9NS00 363 aa28.31■■■□□ 2.12
PABPN1-201ENST00000216727 LRIT2A6NDA9 550 aa28.3■■■□□ 2.12
PABPN1-201ENST00000216727 SHISA7A6NL88 538 aa28.3■■■□□ 2.12
PABPN1-201ENST00000216727 ETFAP13804 333 aa28.3■■■□□ 2.12
PABPN1-201ENST00000216727 GABRG2P18507 467 aa28.3■■■□□ 2.12
PABPN1-201ENST00000216727 ZIC1Q15915 447 aa28.3■■■□□ 2.12
PABPN1-201ENST00000216727 NADK2Q4G0N4 442 aa28.3■■■□□ 2.12
PABPN1-201ENST00000216727 TPRG1LQ5T0D9 272 aa28.3■■■□□ 2.12
PABPN1-201ENST00000216727 GCNT6Q5T4J0 391 aa28.3■■■□□ 2.12
PABPN1-201ENST00000216727 VTCN1Q7Z7D3 282 aa28.3■■■□□ 2.12
PABPN1-201ENST00000216727 HS3ST5Q8IZT8 346 aa28.3■■■□□ 2.12
PABPN1-201ENST00000216727 ADPRHL2Q9NX46 363 aa28.3■■■□□ 2.12
PABPN1-201ENST00000216727 OR6C2Q9NZP2 312 aa28.3■■■□□ 2.12
PABPN1-201ENST00000216727 ABCG2Q9UNQ0 655 aa28.3■■■□□ 2.12
PABPN1-201ENST00000216727 UQCRC2P22695 453 aa28.3■■■□□ 2.12
PABPN1-201ENST00000216727 PEBP1P30086 187 aaKnown RBP28.3■■■□□ 2.12
PABPN1-201ENST00000216727 SLC5A12Q1EHB4 618 aa28.3■■■□□ 2.12
PABPN1-201ENST00000216727 OR4C11Q6IEV9 310 aa28.3■■■□□ 2.12
PABPN1-201ENST00000216727 OFCC1Q8IZS5 231 aa28.3■■■□□ 2.12
PABPN1-201ENST00000216727 MSANTD3Q96H12 275 aa28.3■■■□□ 2.12
PABPN1-201ENST00000216727 YTHDF1Q9BYJ9 559 aaKnown RBP28.3■■■□□ 2.12
PABPN1-201ENST00000216727 TUBA8Q9NY65 449 aaPredicted RBP28.3■■■□□ 2.12
PABPN1-201ENST00000216727 CCDC85CA6NKD9 419 aa28.29■■■□□ 2.12
PABPN1-201ENST00000216727 C10orf142B7Z368 130 aa28.29■■■□□ 2.12
PABPN1-201ENST00000216727 TMPRSS11DO60235 418 aa28.29■■■□□ 2.12
PABPN1-201ENST00000216727 NOBOXO60393 691 aa28.29■■■□□ 2.12
PABPN1-201ENST00000216727 SHMT2P34897 504 aa28.29■■■□□ 2.12
PABPN1-201ENST00000216727 AHRP35869 848 aa28.29■■■□□ 2.12
PABPN1-201ENST00000216727 CHI3L1P36222 383 aaPredicted RBP28.29■■■□□ 2.12
PABPN1-201ENST00000216727 BCL6P41182 706 aa28.29■■■□□ 2.12
PABPN1-201ENST00000216727 YPEL5P62699 121 aa28.29■■■□□ 2.12
PABPN1-201ENST00000216727 ELOAQ14241 798 aaKnown RBP28.29■■■□□ 2.12
PABPN1-201ENST00000216727 ZIK1Q3SY52 487 aaPredicted RBP28.29■■■□□ 2.12
PABPN1-201ENST00000216727 TTC23Q5W5X9 447 aa28.29■■■□□ 2.12
PABPN1-201ENST00000216727 OR5P2Q8WZ92 322 aa28.29■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms