RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 TAAR2Q9P1P5 351 aa13.65□□□□□ -0.22
RTFDC1-201ENST00000023939 RPS6KA6Q9UK32 745 aa13.65□□□□□ -0.22
RTFDC1-201ENST00000023939 CYP8B1Q9UNU6 501 aa13.65□□□□□ -0.22
RTFDC1-201ENST00000023939 PCDHGA2Q9Y5H1 932 aa13.65□□□□□ -0.22
RTFDC1-201ENST00000023939 V9GYQ6 96 aa13.65□□□□□ -0.22
RTFDC1-201ENST00000023939 RNF103-CHMP3A0A140T963 221 aa13.64□□□□□ -0.23
RTFDC1-201ENST00000023939 A0A1W2PRB8 838 aa13.64□□□□□ -0.23
RTFDC1-201ENST00000023939 RTCAO00442 366 aaKnown RBP13.64□□□□□ -0.23
RTFDC1-201ENST00000023939 ZNF217O75362 1048 aa13.64□□□□□ -0.23
RTFDC1-201ENST00000023939 DRD2P14416 443 aa13.64□□□□□ -0.23
RTFDC1-201ENST00000023939 EFNA1P20827 205 aaPredicted RBP13.64□□□□□ -0.23
RTFDC1-201ENST00000023939 TSFMP43897 325 aaKnown RBP13.64□□□□□ -0.23
RTFDC1-201ENST00000023939 RBBP4Q09028 425 aa13.64□□□□□ -0.23
RTFDC1-201ENST00000023939 HYAL2Q12891 473 aa13.64□□□□□ -0.23
RTFDC1-201ENST00000023939 IYDQ6PHW0 289 aa13.64□□□□□ -0.23
RTFDC1-201ENST00000023939 SLC30A9Q6PML9 568 aa13.64□□□□□ -0.23
RTFDC1-201ENST00000023939 PAQR7Q86WK9 346 aa13.64□□□□□ -0.23
RTFDC1-201ENST00000023939 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.64□□□□□ -0.23
RTFDC1-201ENST00000023939 SLC22A18ASQ8N1D0 253 aa13.64□□□□□ -0.23
RTFDC1-201ENST00000023939 FLCNQ8NFG4 579 aa13.64□□□□□ -0.23
RTFDC1-201ENST00000023939 OR5P2Q8WZ92 322 aa13.64□□□□□ -0.23
RTFDC1-201ENST00000023939 CIDECQ96AQ7 238 aaPredicted RBP13.64□□□□□ -0.23
RTFDC1-201ENST00000023939 AICDAQ9GZX7 198 aa13.64□□□□□ -0.23
RTFDC1-201ENST00000023939 LMAN1LQ9HAT1 526 aa13.64□□□□□ -0.23
RTFDC1-201ENST00000023939 EHD3Q9NZN3 535 aa13.64□□□□□ -0.23
RTFDC1-201ENST00000023939 MRPS17Q9Y2R5 130 aaKnown RBP13.64□□□□□ -0.23
RTFDC1-201ENST00000023939 PCDHGA4Q9Y5G9 962 aa13.64□□□□□ -0.23
RTFDC1-201ENST00000023939 AK5Q9Y6K8 562 aa13.64□□□□□ -0.23
RTFDC1-201ENST00000023939 LRP4O75096 1905 aa13.64□□□□□ -0.23
RTFDC1-201ENST00000023939 MYO10Q9HD67 2058 aa13.64□□□□□ -0.23
RTFDC1-201ENST00000023939 SPTY2D1-AS1A0A0U1RR47 76 aa13.64□□□□□ -0.23
RTFDC1-201ENST00000023939 FAM221BA6H8Z2 402 aa13.64□□□□□ -0.23
RTFDC1-201ENST00000023939 PDLIM1O00151 329 aa13.64□□□□□ -0.23
RTFDC1-201ENST00000023939 HAT1O14929 419 aa13.64□□□□□ -0.23
RTFDC1-201ENST00000023939 TNFSF14O43557 240 aa13.64□□□□□ -0.23
RTFDC1-201ENST00000023939 TMPRSS11DO60235 418 aa13.64□□□□□ -0.23
RTFDC1-201ENST00000023939 TNFRSF21O75509 655 aa13.64□□□□□ -0.23
RTFDC1-201ENST00000023939 KRT75O95678 551 aa13.64□□□□□ -0.23
RTFDC1-201ENST00000023939 HPRP00739 348 aa13.64□□□□□ -0.23
RTFDC1-201ENST00000023939 MT-ND1P03886 318 aa13.64□□□□□ -0.23
RTFDC1-201ENST00000023939 SEMG1P04279 462 aa13.64□□□□□ -0.23
RTFDC1-201ENST00000023939 RPS9P46781 194 aaKnown RBP13.64□□□□□ -0.23
RTFDC1-201ENST00000023939 VAC14Q08AM6 782 aa13.64□□□□□ -0.23
RTFDC1-201ENST00000023939 FZD5Q13467 585 aa13.64□□□□□ -0.23
RTFDC1-201ENST00000023939 MYBPC3Q14896 1274 aa13.64□□□□□ -0.23
RTFDC1-201ENST00000023939 TEAD4Q15561 434 aa13.64□□□□□ -0.23
RTFDC1-201ENST00000023939 KIAA1614Q5VZ46 1190 aa13.64□□□□□ -0.23
RTFDC1-201ENST00000023939 CBLL1Q75N03 491 aa13.64□□□□□ -0.23
RTFDC1-201ENST00000023939 EIF3MQ7L2H7 374 aaKnown RBP13.64□□□□□ -0.23
RTFDC1-201ENST00000023939 PLD3Q8IV08 490 aa13.64□□□□□ -0.23
RTFDC1-201ENST00000023939 ZCCHC7Q8N3Z6 543 aaKnown RBP13.64□□□□□ -0.23
RTFDC1-201ENST00000023939 SVOPLQ8N434 492 aa13.64□□□□□ -0.23
RTFDC1-201ENST00000023939 C11orf65Q8NCR3 313 aa13.64□□□□□ -0.23
RTFDC1-201ENST00000023939 SRFBP1Q8NEF9 429 aaKnown RBP13.64□□□□□ -0.23
RTFDC1-201ENST00000023939 TSTD1Q8NFU3 115 aa13.64□□□□□ -0.23
RTFDC1-201ENST00000023939 OR4E2Q8NGC2 313 aa13.64□□□□□ -0.23
RTFDC1-201ENST00000023939 FLVCR1-AS1Q8TAF5 88 aa13.64□□□□□ -0.23
RTFDC1-201ENST00000023939 HLA-CQ95604 372 aa13.64□□□□□ -0.23
RTFDC1-201ENST00000023939 MS4A6EQ96DS6 147 aa13.64□□□□□ -0.23
RTFDC1-201ENST00000023939 TEFMQ96QE5 360 aaKnown RBP13.64□□□□□ -0.23
RTFDC1-201ENST00000023939 ORAI3Q9BRQ5 295 aa13.64□□□□□ -0.23
RTFDC1-201ENST00000023939 SLC35A5Q9BS91 424 aa13.64□□□□□ -0.23
RTFDC1-201ENST00000023939 GSDMCQ9BYG8 508 aa13.64□□□□□ -0.23
RTFDC1-201ENST00000023939 SRMSQ9H3Y6 488 aa13.64□□□□□ -0.23
RTFDC1-201ENST00000023939 EPS8L2Q9H6S3 715 aa13.64□□□□□ -0.23
RTFDC1-201ENST00000023939 ZNF696Q9H7X3 374 aa13.64□□□□□ -0.23
RTFDC1-201ENST00000023939 CD320Q9NPF0 282 aa13.64□□□□□ -0.23
RTFDC1-201ENST00000023939 POT1Q9NUX5 634 aa13.64□□□□□ -0.23
RTFDC1-201ENST00000023939 GPATCH2Q9NW75 528 aa13.64□□□□□ -0.23
RTFDC1-201ENST00000023939 A0A1W2PPC4 97 aa13.63□□□□□ -0.23
RTFDC1-201ENST00000023939 OR5K4A6NMS3 321 aa13.63□□□□□ -0.23
RTFDC1-201ENST00000023939 EIF4E1BA6NMX2 242 aaKnown RBP13.63□□□□□ -0.23
RTFDC1-201ENST00000023939 ISM1B1AKI9 464 aa13.63□□□□□ -0.23
RTFDC1-201ENST00000023939 BTN3A3O00478 584 aa13.63□□□□□ -0.23
RTFDC1-201ENST00000023939 EI24O14681 340 aa13.63□□□□□ -0.23
RTFDC1-201ENST00000023939 FKBP9O95302 570 aa13.63□□□□□ -0.23
RTFDC1-201ENST00000023939 SLC34A2O95436 690 aa13.63□□□□□ -0.23
RTFDC1-201ENST00000023939 FAM58BPP0C7Q3 252 aa13.63□□□□□ -0.23
RTFDC1-201ENST00000023939 UQCRC2P22695 453 aa13.63□□□□□ -0.23
RTFDC1-201ENST00000023939 PCBP4P57723 403 aaKnown RBP13.63□□□□□ -0.23
RTFDC1-201ENST00000023939 RELAQ04206 551 aa13.63□□□□□ -0.23
RTFDC1-201ENST00000023939 EIF2B5Q13144 721 aaKnown RBP13.63□□□□□ -0.23
RTFDC1-201ENST00000023939 BIRC2Q13490 618 aa13.63□□□□□ -0.23
RTFDC1-201ENST00000023939 ELOAQ14241 798 aaKnown RBP13.63□□□□□ -0.23
RTFDC1-201ENST00000023939 MLC1Q15049 377 aa13.63□□□□□ -0.23
RTFDC1-201ENST00000023939 SKIV2LQ15477 1246 aaKnown RBP13.63□□□□□ -0.23
RTFDC1-201ENST00000023939 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.63□□□□□ -0.23
RTFDC1-201ENST00000023939 TRIM40Q6P9F5 258 aa13.63□□□□□ -0.23
RTFDC1-201ENST00000023939 ADHFE1Q8IWW8 467 aa13.63□□□□□ -0.23
RTFDC1-201ENST00000023939 ST13P4Q8IZP2 240 aaPredicted RBP13.63□□□□□ -0.23
RTFDC1-201ENST00000023939 NAGSQ8N159 534 aa13.63□□□□□ -0.23
RTFDC1-201ENST00000023939 TMBIM1Q969X1 311 aa13.63□□□□□ -0.23
RTFDC1-201ENST00000023939 VPS50Q96JG6 964 aa13.63□□□□□ -0.23
RTFDC1-201ENST00000023939 CNBD2Q96M20 576 aa13.63□□□□□ -0.23
RTFDC1-201ENST00000023939 ASPSCR1Q9BZE9 553 aa13.63□□□□□ -0.23
RTFDC1-201ENST00000023939 PCED1AQ9H1Q7 454 aa13.63□□□□□ -0.23
RTFDC1-201ENST00000023939 TMEM38AQ9H6F2 299 aa13.63□□□□□ -0.23
RTFDC1-201ENST00000023939 ACSS1Q9NUB1 689 aaPredicted RBP13.63□□□□□ -0.23
RTFDC1-201ENST00000023939 ANKMY1Q9P2S6 941 aa13.63□□□□□ -0.23
RTFDC1-201ENST00000023939 KLK4Q9Y5K2 254 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms