RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 F2RL3Q96RI0 385 aa25.22■■□□□ 1.63
VEGFA-231ENST00000640499 TMEM109Q9BVC6 243 aa25.22■■□□□ 1.63
VEGFA-231ENST00000640499 MS4A8Q9BY19 250 aa25.22■■□□□ 1.63
VEGFA-231ENST00000640499 ROPN1BQ9BZX4 212 aaPredicted RBP25.22■■□□□ 1.63
VEGFA-231ENST00000640499 ADNPQ9H2P0 1102 aa25.22■■□□□ 1.63
VEGFA-231ENST00000640499 ROPN1Q9HAT0 212 aaPredicted RBP25.22■■□□□ 1.63
VEGFA-231ENST00000640499 LANCL2Q9NS86 450 aa25.22■■□□□ 1.63
VEGFA-231ENST00000640499 SCN2AQ99250 2005 aa25.21■■□□□ 1.63
VEGFA-231ENST00000640499 G3V2L1 256 aa25.21■■□□□ 1.63
VEGFA-231ENST00000640499 UGDHO60701 494 aa25.21■■□□□ 1.63
VEGFA-231ENST00000640499 ALOX12BO75342 701 aa25.21■■□□□ 1.63
VEGFA-231ENST00000640499 PROCP04070 461 aa25.21■■□□□ 1.63
VEGFA-231ENST00000640499 KRT4P19013 534 aa25.21■■□□□ 1.63
VEGFA-231ENST00000640499 TSPAN8P19075 237 aa25.21■■□□□ 1.63
VEGFA-231ENST00000640499 CRHR1P34998 444 aa25.21■■□□□ 1.63
VEGFA-231ENST00000640499 XCR1P46094 333 aa25.21■■□□□ 1.63
VEGFA-231ENST00000640499 PIK3CGP48736 1102 aa25.21■■□□□ 1.63
VEGFA-231ENST00000640499 STXBP1P61764 594 aaKnown RBP25.21■■□□□ 1.63
VEGFA-231ENST00000640499 BTN3A2P78410 334 aa25.21■■□□□ 1.63
VEGFA-231ENST00000640499 DCAF10Q5QP82 559 aa25.21■■□□□ 1.63
VEGFA-231ENST00000640499 MED25Q71SY5 747 aa25.21■■□□□ 1.63
VEGFA-231ENST00000640499 TRABD2AQ86V40 505 aa25.21■■□□□ 1.63
VEGFA-231ENST00000640499 OR11G2Q8NGC1 345 aa25.21■■□□□ 1.63
VEGFA-231ENST00000640499 GAL3ST3Q96A11 431 aa25.21■■□□□ 1.63
VEGFA-231ENST00000640499 C8orf44Q96CB5 159 aa25.21■■□□□ 1.63
VEGFA-231ENST00000640499 PEX11GQ96HA9 241 aa25.21■■□□□ 1.63
VEGFA-231ENST00000640499 IP6K3Q96PC2 410 aa25.21■■□□□ 1.63
VEGFA-231ENST00000640499 TMEM237Q96Q45 408 aa25.21■■□□□ 1.63
VEGFA-231ENST00000640499 NTMT1Q9BV86 223 aa25.21■■□□□ 1.63
VEGFA-231ENST00000640499 VN1R1Q9GZP7 353 aa25.21■■□□□ 1.63
VEGFA-231ENST00000640499 ACTR8Q9H981 624 aa25.21■■□□□ 1.63
VEGFA-231ENST00000640499 SEMA4BQ9NPR2 832 aaPredicted RBP25.21■■□□□ 1.63
VEGFA-231ENST00000640499 PRDM7Q9NQW5 492 aa25.21■■□□□ 1.63
VEGFA-231ENST00000640499 ZNF225Q9UK10 706 aa25.21■■□□□ 1.63
VEGFA-231ENST00000640499 TSC22D4Q9Y3Q8 395 aa25.21■■□□□ 1.63
VEGFA-231ENST00000640499 CFAP46Q8IYW2 2715 aa25.2■■□□□ 1.62
VEGFA-231ENST00000640499 H0YIV9 168 aa25.2■■□□□ 1.62
VEGFA-231ENST00000640499 AGPSO00116 658 aa25.2■■□□□ 1.62
VEGFA-231ENST00000640499 ERI3O43414 337 aaKnown RBP25.2■■□□□ 1.62
VEGFA-231ENST00000640499 GLRA3O75311 464 aa25.2■■□□□ 1.62
VEGFA-231ENST00000640499 CEACAM4O75871 244 aa25.2■■□□□ 1.62
VEGFA-231ENST00000640499 IGHEP01854 428 aa25.2■■□□□ 1.62
VEGFA-231ENST00000640499 TUBBP07437 444 aa25.2■■□□□ 1.62
VEGFA-231ENST00000640499 ATP5F1P24539 256 aaPredicted RBP25.2■■□□□ 1.62
VEGFA-231ENST00000640499 CCL11P51671 97 aa25.2■■□□□ 1.62
VEGFA-231ENST00000640499 PRKAA2P54646 552 aa25.2■■□□□ 1.62
VEGFA-231ENST00000640499 HERVK_113P63132 956 aa25.2■■□□□ 1.62
VEGFA-231ENST00000640499 RUNX2Q13950 521 aa25.2■■□□□ 1.62
VEGFA-231ENST00000640499 ZNF678Q5SXM1 525 aa25.2■■□□□ 1.62
VEGFA-231ENST00000640499 ABHD17CQ6PCB6 329 aa25.2■■□□□ 1.62
VEGFA-231ENST00000640499 IQCKQ8N0W5 287 aa25.2■■□□□ 1.62
VEGFA-231ENST00000640499 RIBC1Q8N443 379 aaPredicted RBP25.2■■□□□ 1.62
VEGFA-231ENST00000640499 TMEM102Q8N9M5 508 aaPredicted RBP25.2■■□□□ 1.62
VEGFA-231ENST00000640499 OR2L5Q8NG80 312 aa25.2■■□□□ 1.62
VEGFA-231ENST00000640499 HUS1BQ8NHY5 278 aa25.2■■□□□ 1.62
VEGFA-231ENST00000640499 WDR20Q8TBZ3 569 aa25.2■■□□□ 1.62
VEGFA-231ENST00000640499 UBE2E3Q969T4 207 aa25.2■■□□□ 1.62
VEGFA-231ENST00000640499 ERVK-6Q9BXR3 956 aa25.2■■□□□ 1.62
VEGFA-231ENST00000640499 REXO4Q9GZR2 422 aaKnown RBP25.2■■□□□ 1.62
VEGFA-231ENST00000640499 TUBD1Q9UJT1 453 aa25.2■■□□□ 1.62
VEGFA-231ENST00000640499 FBXL4Q9UKA2 621 aa25.2■■□□□ 1.62
VEGFA-231ENST00000640499 MKL2Q9ULH7 1088 aa25.2■■□□□ 1.62
VEGFA-231ENST00000640499 TLN1Q9Y490 2541 aaKnown RBP25.19■■□□□ 1.62
VEGFA-231ENST00000640499 URADA6NGE7 173 aa25.19■■□□□ 1.62
VEGFA-231ENST00000640499 PLIN3O60664 434 aa25.19■■□□□ 1.62
VEGFA-231ENST00000640499 CLDN9O95484 217 aa25.19■■□□□ 1.62
VEGFA-231ENST00000640499 PDGFAP04085 211 aa25.19■■□□□ 1.62
VEGFA-231ENST00000640499 PCNAP12004 261 aa25.19■■□□□ 1.62
VEGFA-231ENST00000640499 PLA2G16P53816 162 aa25.19■■□□□ 1.62
VEGFA-231ENST00000640499 ZNF844Q08AG5 666 aa25.19■■□□□ 1.62
VEGFA-231ENST00000640499 RBBP7Q16576 425 aa25.19■■□□□ 1.62
VEGFA-231ENST00000640499 CPSF6Q16630 551 aaKnown RBP eCLIP25.19■■□□□ 1.62
VEGFA-231ENST00000640499 FAAH2Q6GMR7 532 aa25.19■■□□□ 1.62
VEGFA-231ENST00000640499 TMEM205Q6UW68 189 aa25.19■■□□□ 1.62
VEGFA-231ENST00000640499 CA13Q8N1Q1 262 aa25.19■■□□□ 1.62
VEGFA-231ENST00000640499 RBCK1Q9BYM8 510 aa25.19■■□□□ 1.62
VEGFA-231ENST00000640499 MLXIPLQ9NP71 852 aa25.19■■□□□ 1.62
VEGFA-231ENST00000640499 PEX12O00623 359 aa25.18■■□□□ 1.62
VEGFA-231ENST00000640499 SH3BGRLO75368 114 aa25.18■■□□□ 1.62
VEGFA-231ENST00000640499 TGFB1P01137 390 aa25.18■■□□□ 1.62
VEGFA-231ENST00000640499 TAC1P20366 129 aa25.18■■□□□ 1.62
VEGFA-231ENST00000640499 IMPDH1P20839 514 aa25.18■■□□□ 1.62
VEGFA-231ENST00000640499 IFFO1Q0D2I5 559 aa25.18■■□□□ 1.62
VEGFA-231ENST00000640499 Q0VFX4 171 aa25.18■■□□□ 1.62
VEGFA-231ENST00000640499 MYLK4Q86YV6 388 aaPredicted RBP25.18■■□□□ 1.62
VEGFA-231ENST00000640499 BANPQ8N9N5 519 aa25.18■■□□□ 1.62
VEGFA-231ENST00000640499 OR4F6Q8NGB9 312 aa25.18■■□□□ 1.62
VEGFA-231ENST00000640499 PCDHGA11Q9Y5H2 935 aa25.18■■□□□ 1.62
VEGFA-231ENST00000640499 TNRC6AQ8NDV7 1962 aaKnown RBP25.17■■□□□ 1.62
VEGFA-231ENST00000640499 LOC102723996A0A087X1L8 192 aa25.17■■□□□ 1.62
VEGFA-231ENST00000640499 A0A1W2PQ72 361 aa25.17■■□□□ 1.62
VEGFA-231ENST00000640499 FAM227AF5H4B4 570 aa25.17■■□□□ 1.62
VEGFA-231ENST00000640499 HEXBP07686 556 aa25.17■■□□□ 1.62
VEGFA-231ENST00000640499 CREB1P16220 341 aa25.17■■□□□ 1.62
VEGFA-231ENST00000640499 NR1D1P20393 614 aa25.17■■□□□ 1.62
VEGFA-231ENST00000640499 CCT5P48643 541 aa25.17■■□□□ 1.62
VEGFA-231ENST00000640499 NEK2P51955 445 aa25.17■■□□□ 1.62
VEGFA-231ENST00000640499 CCNG1P51959 295 aa25.17■■□□□ 1.62
VEGFA-231ENST00000640499 RHAGQ02094 409 aa25.17■■□□□ 1.62
VEGFA-231ENST00000640499 CLCQ05315 142 aa25.17■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms