RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 PCNAP12004 261 aa20.57■□□□□ 0.88
SCN1B-206ENST00000638536 PIK3CGP48736 1102 aa20.57■□□□□ 0.88
SCN1B-206ENST00000638536 EMP2P54851 167 aa20.57■□□□□ 0.88
SCN1B-206ENST00000638536 CDH13P55290 713 aa20.57■□□□□ 0.88
SCN1B-206ENST00000638536 RAPSNQ13702 412 aa20.57■□□□□ 0.88
SCN1B-206ENST00000638536 RBBP7Q16576 425 aa20.57■□□□□ 0.88
SCN1B-206ENST00000638536 ADPRMQ3LIE5 342 aa20.57■□□□□ 0.88
SCN1B-206ENST00000638536 PAGE2BQ5JRK9 111 aa20.57■□□□□ 0.88
SCN1B-206ENST00000638536 MED25Q71SY5 747 aa20.57■□□□□ 0.88
SCN1B-206ENST00000638536 TMEM102Q8N9M5 508 aaPredicted RBP20.57■□□□□ 0.88
SCN1B-206ENST00000638536 OR11G2Q8NGC1 345 aa20.57■□□□□ 0.88
SCN1B-206ENST00000638536 VN1R1Q9GZP7 353 aa20.57■□□□□ 0.88
SCN1B-206ENST00000638536 ACTR8Q9H981 624 aa20.57■□□□□ 0.88
SCN1B-206ENST00000638536 SEMA4BQ9NPR2 832 aaPredicted RBP20.57■□□□□ 0.88
SCN1B-206ENST00000638536 C14orf105Q9NVL8 296 aa20.57■□□□□ 0.88
SCN1B-206ENST00000638536 FBXL4Q9UKA2 621 aa20.57■□□□□ 0.88
SCN1B-206ENST00000638536 TP53TG5Q9Y2B4 290 aa20.57■□□□□ 0.88
SCN1B-206ENST00000638536 ERI3O43414 337 aaKnown RBP20.56■□□□□ 0.88
SCN1B-206ENST00000638536 CDC123O75794 336 aaPredicted RBP20.56■□□□□ 0.88
SCN1B-206ENST00000638536 HEXBP07686 556 aa20.56■□□□□ 0.88
SCN1B-206ENST00000638536 PLA2G16P53816 162 aa20.56■□□□□ 0.88
SCN1B-206ENST00000638536 BTN3A2P78410 334 aa20.56■□□□□ 0.88
SCN1B-206ENST00000638536 HIST2H2ACQ16777 129 aaPredicted RBP20.56■□□□□ 0.88
SCN1B-206ENST00000638536 HIST2H2AA3Q6FI13 130 aa20.56■□□□□ 0.88
SCN1B-206ENST00000638536 MED27Q6P2C8 311 aa20.56■□□□□ 0.88
SCN1B-206ENST00000638536 UBE3DQ7Z6J8 389 aa20.56■□□□□ 0.88
SCN1B-206ENST00000638536 C4orf33Q8N1A6 199 aa20.56■□□□□ 0.88
SCN1B-206ENST00000638536 ZBTB9Q96C00 473 aa20.56■□□□□ 0.88
SCN1B-206ENST00000638536 REXO4Q9GZR2 422 aaKnown RBP20.56■□□□□ 0.88
SCN1B-206ENST00000638536 SLC25A18Q9H1K4 315 aa20.56■□□□□ 0.88
SCN1B-206ENST00000638536 PPCSQ9HAB8 311 aa20.56■□□□□ 0.88
SCN1B-206ENST00000638536 LANCL2Q9NS86 450 aa20.56■□□□□ 0.88
SCN1B-206ENST00000638536 FASNP49327 2511 aaKnown RBP20.56■□□□□ 0.88
SCN1B-206ENST00000638536 PEX12O00623 359 aa20.56■□□□□ 0.88
SCN1B-206ENST00000638536 TGFB1P01137 390 aa20.56■□□□□ 0.88
SCN1B-206ENST00000638536 STXBP1P61764 594 aaKnown RBP20.56■□□□□ 0.88
SCN1B-206ENST00000638536 TRAF3Q13114 568 aa20.56■□□□□ 0.88
SCN1B-206ENST00000638536 RUNX2Q13950 521 aa20.56■□□□□ 0.88
SCN1B-206ENST00000638536 CPSF6Q16630 551 aaKnown RBP eCLIP20.56■□□□□ 0.88
SCN1B-206ENST00000638536 LIPJQ5W064 366 aa20.56■□□□□ 0.88
SCN1B-206ENST00000638536 LANCL3Q6ZV70 420 aa20.56■□□□□ 0.88
SCN1B-206ENST00000638536 MREGQ8N565 214 aa20.56■□□□□ 0.88
SCN1B-206ENST00000638536 FDCSPQ8NFU4 85 aa20.56■□□□□ 0.88
SCN1B-206ENST00000638536 ZNF483Q8TF39 744 aaPredicted RBP20.56■□□□□ 0.88
SCN1B-206ENST00000638536 GAL3ST3Q96A11 431 aa20.56■□□□□ 0.88
SCN1B-206ENST00000638536 QRFPRQ96P65 431 aa20.56■□□□□ 0.88
SCN1B-206ENST00000638536 IP6K3Q96PC2 410 aa20.56■□□□□ 0.88
SCN1B-206ENST00000638536 TMEM237Q96Q45 408 aa20.56■□□□□ 0.88
SCN1B-206ENST00000638536 MS4A8Q9BY19 250 aa20.56■□□□□ 0.88
SCN1B-206ENST00000638536 DCDC2Q9UHG0 476 aa20.56■□□□□ 0.88
SCN1B-206ENST00000638536 TUBD1Q9UJT1 453 aa20.56■□□□□ 0.88
SCN1B-206ENST00000638536 TMCO1Q9UM00 188 aa20.56■□□□□ 0.88
SCN1B-206ENST00000638536 PLAAQ9Y263 795 aa20.56■□□□□ 0.88
SCN1B-206ENST00000638536 URADA6NGE7 173 aa20.55■□□□□ 0.88
SCN1B-206ENST00000638536 FAM227AF5H4B4 570 aa20.55■□□□□ 0.88
SCN1B-206ENST00000638536 GSTA1P08263 222 aa20.55■□□□□ 0.88
SCN1B-206ENST00000638536 KRT4P19013 534 aa20.55■□□□□ 0.88
SCN1B-206ENST00000638536 GSTM2P28161 218 aa20.55■□□□□ 0.88
SCN1B-206ENST00000638536 Q0VFX4 171 aa20.55■□□□□ 0.88
SCN1B-206ENST00000638536 NFATC3Q12968 1075 aa20.55■□□□□ 0.88
SCN1B-206ENST00000638536 DDX39BQ13838 428 aaKnown RBP20.55■□□□□ 0.88
SCN1B-206ENST00000638536 MINDY4Q4G0A6 757 aa20.55■□□□□ 0.88
SCN1B-206ENST00000638536 UNC50Q53HI1 259 aa20.55■□□□□ 0.88
SCN1B-206ENST00000638536 MFSD4BQ5TF39 518 aa20.55■□□□□ 0.88
SCN1B-206ENST00000638536 METTL2BQ6P1Q9 378 aaKnown RBP20.55■□□□□ 0.88
SCN1B-206ENST00000638536 ABHD17CQ6PCB6 329 aa20.55■□□□□ 0.88
SCN1B-206ENST00000638536 LCA5Q86VQ0 697 aa20.55■□□□□ 0.88
SCN1B-206ENST00000638536 L3MBTL4Q8NA19 623 aa20.55■□□□□ 0.88
SCN1B-206ENST00000638536 HUS1BQ8NHY5 278 aa20.55■□□□□ 0.88
SCN1B-206ENST00000638536 C9orf43Q8TAL5 461 aaPredicted RBP20.55■□□□□ 0.88
SCN1B-206ENST00000638536 NACC2Q96BF6 587 aa20.55■□□□□ 0.88
SCN1B-206ENST00000638536 SEC16BQ96JE7 1060 aa20.55■□□□□ 0.88
SCN1B-206ENST00000638536 MTERF1Q99551 399 aaKnown RBP20.55■□□□□ 0.88
SCN1B-206ENST00000638536 NUDT9Q9BW91 350 aa20.55■□□□□ 0.88
SCN1B-206ENST00000638536 ZNF225Q9UK10 706 aa20.55■□□□□ 0.88
SCN1B-206ENST00000638536 G3V2L1 256 aa20.54■□□□□ 0.88
SCN1B-206ENST00000638536 SAP18O00422 153 aaKnown RBP20.54■□□□□ 0.88
SCN1B-206ENST00000638536 RTCAO00442 366 aaKnown RBP20.54■□□□□ 0.88
SCN1B-206ENST00000638536 CEACAM4O75871 244 aa20.54■□□□□ 0.88
SCN1B-206ENST00000638536 NEK2P51955 445 aa20.54■□□□□ 0.88
SCN1B-206ENST00000638536 EEF1A2Q05639 463 aaKnown RBP20.54■□□□□ 0.88
SCN1B-206ENST00000638536 SLC18A2Q05940 514 aa20.54■□□□□ 0.88
SCN1B-206ENST00000638536 COLEC12Q5KU26 742 aa20.54■□□□□ 0.88
SCN1B-206ENST00000638536 PTRH1Q86Y79 214 aaKnown RBP20.54■□□□□ 0.88
SCN1B-206ENST00000638536 CA13Q8N1Q1 262 aa20.54■□□□□ 0.88
SCN1B-206ENST00000638536 OR2L5Q8NG80 312 aa20.54■□□□□ 0.88
SCN1B-206ENST00000638536 NTMT1Q9BV86 223 aa20.54■□□□□ 0.88
SCN1B-206ENST00000638536 C1QTNF3Q9BXJ4 246 aa20.54■□□□□ 0.88
SCN1B-206ENST00000638536 OR51B5Q9H339 312 aa20.54■□□□□ 0.88
SCN1B-206ENST00000638536 PRDM7Q9NQW5 492 aa20.54■□□□□ 0.88
SCN1B-206ENST00000638536 NBASA2RRP1 2371 aa20.53■□□□□ 0.88
SCN1B-206ENST00000638536 IGHV3-20A0A0C4DH32 117 aa20.53■□□□□ 0.88
SCN1B-206ENST00000638536 EIF4E1BA6NMX2 242 aaKnown RBP20.53■□□□□ 0.88
SCN1B-206ENST00000638536 MKRN2OSH3BPM6 223 aa20.53■□□□□ 0.88
SCN1B-206ENST00000638536 GLRA3O75311 464 aa20.53■□□□□ 0.88
SCN1B-206ENST00000638536 IGHEP01854 428 aa20.53■□□□□ 0.88
SCN1B-206ENST00000638536 PROCP04070 461 aa20.53■□□□□ 0.88
SCN1B-206ENST00000638536 COX6A1P12074 109 aa20.53■□□□□ 0.88
SCN1B-206ENST00000638536 CRHR1P34998 444 aa20.53■□□□□ 0.88
SCN1B-206ENST00000638536 CCNG1P51959 295 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms