RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 HPS6Q86YV9 775 aa7.41□□□□□ -1.22
PNKP-229ENST00000637897 LMNTD2Q8IXW0 634 aa7.41□□□□□ -1.22
PNKP-229ENST00000637897 ANKRD53Q8N9V6 530 aa7.41□□□□□ -1.22
PNKP-229ENST00000637897 ABHD11Q8NFV4 315 aa7.41□□□□□ -1.22
PNKP-229ENST00000637897 RAB3IL1Q8TBN0 382 aa7.41□□□□□ -1.22
PNKP-229ENST00000637897 BRIX1Q8TDN6 353 aaKnown RBP7.41□□□□□ -1.22
PNKP-229ENST00000637897 PPP4R1Q8TF05 950 aa7.41□□□□□ -1.22
PNKP-229ENST00000637897 MIEF2Q96C03 454 aa7.41□□□□□ -1.22
PNKP-229ENST00000637897 MVB12AQ96EY5 273 aa7.41□□□□□ -1.22
PNKP-229ENST00000637897 MMABQ96EY8 250 aaPredicted RBP7.41□□□□□ -1.22
PNKP-229ENST00000637897 THOC3Q96J01 351 aaKnown RBP7.41□□□□□ -1.22
PNKP-229ENST00000637897 FAM167BQ9BTA0 163 aa7.41□□□□□ -1.22
PNKP-229ENST00000637897 VN1R1Q9GZP7 353 aa7.41□□□□□ -1.22
PNKP-229ENST00000637897 LHPPQ9H008 270 aa7.41□□□□□ -1.22
PNKP-229ENST00000637897 PARVBQ9HBI1 364 aa7.41□□□□□ -1.22
PNKP-229ENST00000637897 SLAMF7Q9NQ25 335 aa7.41□□□□□ -1.22
PNKP-229ENST00000637897 LANCL2Q9NS86 450 aa7.41□□□□□ -1.22
PNKP-229ENST00000637897 TMEM184CQ9NVA4 438 aa7.41□□□□□ -1.22
PNKP-229ENST00000637897 TRPC4Q9UBN4 977 aa7.41□□□□□ -1.22
PNKP-229ENST00000637897 NXT1Q9UKK6 140 aaKnown RBP7.41□□□□□ -1.22
PNKP-229ENST00000637897 GRID1Q9ULK0 1009 aa7.41□□□□□ -1.22
PNKP-229ENST00000637897 VPS9D1Q9Y2B5 631 aa7.41□□□□□ -1.22
PNKP-229ENST00000637897 ARL2BPQ9Y2Y0 163 aa7.41□□□□□ -1.22
PNKP-229ENST00000637897 PLLPQ9Y342 182 aa7.41□□□□□ -1.22
PNKP-229ENST00000637897 RRP15Q9Y3B9 282 aaKnown RBP7.41□□□□□ -1.22
PNKP-229ENST00000637897 CLDN16Q9Y5I7 305 aa7.41□□□□□ -1.22
PNKP-229ENST00000637897 COMMD10Q9Y6G5 202 aa7.41□□□□□ -1.22
PNKP-229ENST00000637897 MYO7BQ6PIF6 2116 aa7.4□□□□□ -1.22
PNKP-229ENST00000637897 PCNX1Q96RV3 2341 aa7.4□□□□□ -1.22
PNKP-229ENST00000637897 TEX15Q9BXT5 2789 aa7.4□□□□□ -1.22
PNKP-229ENST00000637897 HMX2A2RU54 273 aa7.4□□□□□ -1.22
PNKP-229ENST00000637897 SLC16A5O15375 505 aa7.4□□□□□ -1.22
PNKP-229ENST00000637897 BIRC5O15392 142 aa7.4□□□□□ -1.22
PNKP-229ENST00000637897 EDF1O60869 148 aaKnown RBP7.4□□□□□ -1.22
PNKP-229ENST00000637897 GLRA3O75311 464 aa7.4□□□□□ -1.22
PNKP-229ENST00000637897 VPS4BO75351 444 aa7.4□□□□□ -1.22
PNKP-229ENST00000637897 VPS26AO75436 327 aa7.4□□□□□ -1.22
PNKP-229ENST00000637897 NSA2O95478 260 aaKnown RBP7.4□□□□□ -1.22
PNKP-229ENST00000637897 F10P00742 488 aa7.4□□□□□ -1.22
PNKP-229ENST00000637897 GSTA1P08263 222 aa7.4□□□□□ -1.22
PNKP-229ENST00000637897 CD63P08962 238 aa7.4□□□□□ -1.22
PNKP-229ENST00000637897 SMIM10L1P0DMW3 83 aa7.4□□□□□ -1.22
PNKP-229ENST00000637897 PIM1P11309 404 aaPredicted RBP7.4□□□□□ -1.22
PNKP-229ENST00000637897 ACPPP15309 386 aa7.4□□□□□ -1.22
PNKP-229ENST00000637897 ZNF37AP17032 561 aaPredicted RBP7.4□□□□□ -1.22
PNKP-229ENST00000637897 EPORP19235 508 aa7.4□□□□□ -1.22
PNKP-229ENST00000637897 ETV4P43268 484 aa7.4□□□□□ -1.22
PNKP-229ENST00000637897 KCNC1P48547 511 aa7.4□□□□□ -1.22
PNKP-229ENST00000637897 SERPINB8P50452 374 aa7.4□□□□□ -1.22
PNKP-229ENST00000637897 CORO7P57737 925 aa7.4□□□□□ -1.22
PNKP-229ENST00000637897 RHAGQ02094 409 aa7.4□□□□□ -1.22
PNKP-229ENST00000637897 MFAP5Q13361 173 aa7.4□□□□□ -1.22
PNKP-229ENST00000637897 ZKSCAN8Q15776 578 aaPredicted RBP7.4□□□□□ -1.22
PNKP-229ENST00000637897 ADNP2Q6IQ32 1131 aa7.4□□□□□ -1.22
PNKP-229ENST00000637897 LCTLQ6UWM7 567 aa7.4□□□□□ -1.22
PNKP-229ENST00000637897 KIAA0408Q6ZU52 694 aa7.4□□□□□ -1.22
PNKP-229ENST00000637897 NDUFAF7Q7L592 441 aa7.4□□□□□ -1.22
PNKP-229ENST00000637897 STRA8Q7Z7C7 330 aa7.4□□□□□ -1.22
PNKP-229ENST00000637897 ATCAYQ86WG3 371 aa7.4□□□□□ -1.22
PNKP-229ENST00000637897 RAB42Q8N4Z0 105 aa7.4□□□□□ -1.22
PNKP-229ENST00000637897 SIRT6Q8N6T7 355 aa7.4□□□□□ -1.22
PNKP-229ENST00000637897 GBP7Q8N8V2 638 aaPredicted RBP7.4□□□□□ -1.22
PNKP-229ENST00000637897 MFSD9Q8NBP5 474 aa7.4□□□□□ -1.22
PNKP-229ENST00000637897 OR51Q1Q8NH59 317 aa7.4□□□□□ -1.22
PNKP-229ENST00000637897 CALML6Q8TD86 181 aa7.4□□□□□ -1.22
PNKP-229ENST00000637897 GRHL3Q8TE85 626 aa7.4□□□□□ -1.22
PNKP-229ENST00000637897 ZNF75CPQ92670 426 aaPredicted RBP7.4□□□□□ -1.22
PNKP-229ENST00000637897 TSLPQ969D9 159 aa7.4□□□□□ -1.22
PNKP-229ENST00000637897 NEIL2Q969S2 332 aa7.4□□□□□ -1.22
PNKP-229ENST00000637897 ISL2Q96A47 359 aa7.4□□□□□ -1.22
PNKP-229ENST00000637897 PDLIM5Q96HC4 596 aaKnown RBP7.4□□□□□ -1.22
PNKP-229ENST00000637897 SMIM10Q96HG1 83 aa7.4□□□□□ -1.22
PNKP-229ENST00000637897 FAM111AQ96PZ2 611 aa7.4□□□□□ -1.22
PNKP-229ENST00000637897 RBBP8Q99708 897 aa7.4□□□□□ -1.22
PNKP-229ENST00000637897 UNKQ9C0B0 810 aaKnown RBP7.4□□□□□ -1.22
PNKP-229ENST00000637897 DRC3Q9H069 523 aa7.4□□□□□ -1.22
PNKP-229ENST00000637897 ZNF700Q9H0M5 742 aa7.4□□□□□ -1.22
PNKP-229ENST00000637897 KLHL31Q9H511 634 aa7.4□□□□□ -1.22
PNKP-229ENST00000637897 MANSC1Q9H8J5 431 aa7.4□□□□□ -1.22
PNKP-229ENST00000637897 CCDC177Q9NQR7 707 aaPredicted RBP7.4□□□□□ -1.22
PNKP-229ENST00000637897 TAS2R13Q9NYV9 303 aa7.4□□□□□ -1.22
PNKP-229ENST00000637897 HCN3Q9P1Z3 774 aa7.4□□□□□ -1.22
PNKP-229ENST00000637897 KLHL14Q9P2G3 628 aa7.4□□□□□ -1.22
PNKP-229ENST00000637897 SLC17A7Q9P2U7 560 aa7.4□□□□□ -1.22
PNKP-229ENST00000637897 DCDC2Q9UHG0 476 aa7.4□□□□□ -1.22
PNKP-229ENST00000637897 TRMT6Q9UJA5 497 aaKnown RBP7.4□□□□□ -1.22
PNKP-229ENST00000637897 PRDM4Q9UKN5 801 aa7.4□□□□□ -1.22
PNKP-229ENST00000637897 VPS4AQ9UN37 437 aa7.4□□□□□ -1.22
PNKP-229ENST00000637897 VWA7Q9Y334 891 aa7.4□□□□□ -1.22
PNKP-229ENST00000637897 ASB1Q9Y576 335 aa7.4□□□□□ -1.22
PNKP-229ENST00000637897 ANKRD17O75179 2603 aaKnown RBP7.4□□□□□ -1.23
PNKP-229ENST00000637897 ZNF860A6NHJ4 632 aa7.39□□□□□ -1.23
PNKP-229ENST00000637897 CCT8L1PA6NM43 557 aa7.39□□□□□ -1.23
PNKP-229ENST00000637897 H0YIG0 161 aa7.39□□□□□ -1.23
PNKP-229ENST00000637897 TGFBR3LH3BV60 316 aa7.39□□□□□ -1.23
PNKP-229ENST00000637897 KLF11O14901 512 aa7.39□□□□□ -1.23
PNKP-229ENST00000637897 PFDN6O15212 129 aa7.39□□□□□ -1.23
PNKP-229ENST00000637897 TAPBPO15533 448 aa7.39□□□□□ -1.23
PNKP-229ENST00000637897 RDH16O75452 317 aa7.39□□□□□ -1.23
PNKP-229ENST00000637897 CCNDBP1O95273 360 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms