RNA–Protein interactions for RNA: ENST00000633627.1

CROCCP4-202, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 4, humanhuman

TSL 3 BASIC

Gene CROCCP4, Length 573 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP4-202ENST00000633627 MAP4K5Q9Y4K4 846 aa18.39■□□□□ 0.53
CROCCP4-202ENST00000633627 CACNA1GO43497 2377 aa18.38■□□□□ 0.53
CROCCP4-202ENST00000633627 MGAQ8IWI9 3026 aa18.38■□□□□ 0.53
CROCCP4-202ENST00000633627 UQCRHLA0A096LP55 91 aa18.38■□□□□ 0.53
CROCCP4-202ENST00000633627 SGK494L7N484 410 aa18.38■□□□□ 0.53
CROCCP4-202ENST00000633627 FOXE1O00358 373 aaPredicted RBP18.38■□□□□ 0.53
CROCCP4-202ENST00000633627 FFAR3O14843 346 aa18.38■□□□□ 0.53
CROCCP4-202ENST00000633627 GPR42O15529 346 aa18.38■□□□□ 0.53
CROCCP4-202ENST00000633627 CREG1O75629 220 aa18.38■□□□□ 0.53
CROCCP4-202ENST00000633627 SASH3O75995 380 aa18.38■□□□□ 0.53
CROCCP4-202ENST00000633627 ZWINTO95229 277 aa18.38■□□□□ 0.53
CROCCP4-202ENST00000633627 UQCRHP07919 91 aa18.38■□□□□ 0.53
CROCCP4-202ENST00000633627 CD63P08962 238 aa18.38■□□□□ 0.53
CROCCP4-202ENST00000633627 ATXN8OSP0DMR3 200 aa18.38■□□□□ 0.53
CROCCP4-202ENST00000633627 HPDP32754 393 aaPredicted RBP18.38■□□□□ 0.53
CROCCP4-202ENST00000633627 CCR10P46092 362 aa18.38■□□□□ 0.53
CROCCP4-202ENST00000633627 SERPINB4P48594 390 aa18.38■□□□□ 0.53
CROCCP4-202ENST00000633627 NEK2P51955 445 aa18.38■□□□□ 0.53
CROCCP4-202ENST00000633627 VAC14Q08AM6 782 aa18.38■□□□□ 0.53
CROCCP4-202ENST00000633627 DEFB134Q4QY38 66 aa18.38■□□□□ 0.53
CROCCP4-202ENST00000633627 CRTC2Q53ET0 693 aaPredicted RBP18.38■□□□□ 0.53
CROCCP4-202ENST00000633627 CFAP157Q5JU67 520 aa18.38■□□□□ 0.53
CROCCP4-202ENST00000633627 C10orf62Q5T681 223 aaPredicted RBP18.38■□□□□ 0.53
CROCCP4-202ENST00000633627 DEPDC1Q5TB30 811 aa18.38■□□□□ 0.53
CROCCP4-202ENST00000633627 FAM219BQ5XKK7 198 aa18.38■□□□□ 0.53
CROCCP4-202ENST00000633627 NIPAL1Q6NVV3 410 aa18.38■□□□□ 0.53
CROCCP4-202ENST00000633627 ABHD17CQ6PCB6 329 aa18.38■□□□□ 0.53
CROCCP4-202ENST00000633627 UBE3DQ7Z6J8 389 aa18.38■□□□□ 0.53
CROCCP4-202ENST00000633627 SHISA5Q8N114 240 aa18.38■□□□□ 0.53
CROCCP4-202ENST00000633627 OR2L5Q8NG80 312 aa18.38■□□□□ 0.53
CROCCP4-202ENST00000633627 OR6Y1Q8NGX8 325 aa18.38■□□□□ 0.53
CROCCP4-202ENST00000633627 AGAP11Q8TF27 550 aa18.38■□□□□ 0.53
CROCCP4-202ENST00000633627 CMTM7Q96FZ5 175 aa18.38■□□□□ 0.53
CROCCP4-202ENST00000633627 QRFPRQ96P65 431 aa18.38■□□□□ 0.53
CROCCP4-202ENST00000633627 MTERF1Q99551 399 aaKnown RBP18.38■□□□□ 0.53
CROCCP4-202ENST00000633627 SPSB2Q99619 263 aa18.38■□□□□ 0.53
CROCCP4-202ENST00000633627 REXO4Q9GZR2 422 aaKnown RBP18.38■□□□□ 0.53
CROCCP4-202ENST00000633627 WDR54Q9H977 334 aa18.38■□□□□ 0.53
CROCCP4-202ENST00000633627 KCNK9Q9NPC2 374 aa18.38■□□□□ 0.53
CROCCP4-202ENST00000633627 LOC400499M0QZD8 3231 aa18.37■□□□□ 0.53
CROCCP4-202ENST00000633627 ZNF891A8MT65 544 aaPredicted RBP18.37■□□□□ 0.53
CROCCP4-202ENST00000633627 MAGEB17A8MXT2 336 aa18.37■□□□□ 0.53
CROCCP4-202ENST00000633627 NKX2-8O15522 239 aa18.37■□□□□ 0.53
CROCCP4-202ENST00000633627 ERI3O43414 337 aaKnown RBP18.37■□□□□ 0.53
CROCCP4-202ENST00000633627 DNAJB6O75190 326 aa18.37■□□□□ 0.53
CROCCP4-202ENST00000633627 RDH16O75452 317 aa18.37■□□□□ 0.53
CROCCP4-202ENST00000633627 ESRRBO95718 433 aa18.37■□□□□ 0.53
CROCCP4-202ENST00000633627 TGFB1P01137 390 aa18.37■□□□□ 0.53
CROCCP4-202ENST00000633627 SLC18A1P54219 525 aa18.37■□□□□ 0.53
CROCCP4-202ENST00000633627 FOXL2P58012 376 aa18.37■□□□□ 0.53
CROCCP4-202ENST00000633627 MAT1AQ00266 395 aaKnown RBP18.37■□□□□ 0.53
CROCCP4-202ENST00000633627 ASPHQ12797 758 aa18.37■□□□□ 0.53
CROCCP4-202ENST00000633627 DDX39BQ13838 428 aaKnown RBP18.37■□□□□ 0.53
CROCCP4-202ENST00000633627 SYT16Q17RD7 645 aa18.37■□□□□ 0.53
CROCCP4-202ENST00000633627 TMEM35AQ53FP2 167 aa18.37■□□□□ 0.53
CROCCP4-202ENST00000633627 FAM69BQ5VUD6 431 aa18.37■□□□□ 0.53
CROCCP4-202ENST00000633627 OR2Y1Q8NGV0 311 aa18.37■□□□□ 0.53
CROCCP4-202ENST00000633627 STT3BQ8TCJ2 826 aa18.37■□□□□ 0.53
CROCCP4-202ENST00000633627 PKNOX2Q96KN3 472 aa18.37■□□□□ 0.53
CROCCP4-202ENST00000633627 TRMOQ9BU70 441 aa18.37■□□□□ 0.53
CROCCP4-202ENST00000633627 SLC29A3Q9BZD2 475 aa18.37■□□□□ 0.53
CROCCP4-202ENST00000633627 TGIF2Q9GZN2 237 aa18.37■□□□□ 0.53
CROCCP4-202ENST00000633627 CLK4Q9HAZ1 481 aaKnown RBP18.37■□□□□ 0.53
CROCCP4-202ENST00000633627 TRPC4Q9UBN4 977 aa18.37■□□□□ 0.53
CROCCP4-202ENST00000633627 ZNF282Q9UDV7 671 aaPredicted RBP18.37■□□□□ 0.53
CROCCP4-202ENST00000633627 PADI2Q9Y2J8 665 aa18.37■□□□□ 0.53
CROCCP4-202ENST00000633627 TMEM120BA0PK00 339 aa18.36■□□□□ 0.53
CROCCP4-202ENST00000633627 ZNF860A6NHJ4 632 aa18.36■□□□□ 0.53
CROCCP4-202ENST00000633627 H3BQF6 201 aa18.36■□□□□ 0.53
CROCCP4-202ENST00000633627 ENO1P06733 434 aaKnown RBP18.36■□□□□ 0.53
CROCCP4-202ENST00000633627 PTX3P26022 381 aaPredicted RBP18.36■□□□□ 0.53
CROCCP4-202ENST00000633627 RPS13P62277 151 aaKnown RBP18.36■□□□□ 0.53
CROCCP4-202ENST00000633627 SKP1P63208 163 aa18.36■□□□□ 0.53
CROCCP4-202ENST00000633627 VWA2Q5GFL6 755 aa18.36■□□□□ 0.53
CROCCP4-202ENST00000633627 KHDRBS2Q5VWX1 349 aaKnown RBP18.36■□□□□ 0.53
CROCCP4-202ENST00000633627 CHSY3Q70JA7 882 aa18.36■□□□□ 0.53
CROCCP4-202ENST00000633627 CDYL2Q8N8U2 506 aa18.36■□□□□ 0.53
CROCCP4-202ENST00000633627 CRELD1Q96HD1 420 aa18.36■□□□□ 0.53
CROCCP4-202ENST00000633627 CNDP1Q96KN2 507 aa18.36■□□□□ 0.53
CROCCP4-202ENST00000633627 OR51B5Q9H339 312 aa18.36■□□□□ 0.53
CROCCP4-202ENST00000633627 PRORYQ9H606 182 aa18.36■□□□□ 0.53
CROCCP4-202ENST00000633627 TNFRSF12AQ9NP84 129 aa18.36■□□□□ 0.53
CROCCP4-202ENST00000633627 MID1IP1Q9NPA3 183 aa18.36■□□□□ 0.53
CROCCP4-202ENST00000633627 MKKSQ9NPJ1 570 aaPredicted RBP18.36■□□□□ 0.53
CROCCP4-202ENST00000633627 PRDM7Q9NQW5 492 aa18.36■□□□□ 0.53
CROCCP4-202ENST00000633627 ZNF446Q9NWS9 450 aa18.36■□□□□ 0.53
CROCCP4-202ENST00000633627 NXT1Q9UKK6 140 aaKnown RBP18.36■□□□□ 0.53
CROCCP4-202ENST00000633627 SNX6Q9UNH7 406 aa18.36■□□□□ 0.53
CROCCP4-202ENST00000633627 PTRH2Q9Y3E5 179 aaKnown RBP18.36■□□□□ 0.53
CROCCP4-202ENST00000633627 KMT2BQ9UMN6 2715 aaPredicted RBP18.36■□□□□ 0.53
CROCCP4-202ENST00000633627 A0A0G2JN53 185 aa18.35■□□□□ 0.53
CROCCP4-202ENST00000633627 MANBAO00462 879 aa18.35■□□□□ 0.53
CROCCP4-202ENST00000633627 BIRC5O15392 142 aa18.35■□□□□ 0.53
CROCCP4-202ENST00000633627 NPHS1O60500 1241 aa18.35■□□□□ 0.53
CROCCP4-202ENST00000633627 ETHE1O95571 254 aa18.35■□□□□ 0.53
CROCCP4-202ENST00000633627 UMODP07911 640 aa18.35■□□□□ 0.53
CROCCP4-202ENST00000633627 ZGLP1P0C6A0 271 aa18.35■□□□□ 0.53
CROCCP4-202ENST00000633627 PLA2G16P53816 162 aa18.35■□□□□ 0.53
CROCCP4-202ENST00000633627 WDR4P57081 412 aaKnown RBP18.35■□□□□ 0.53
CROCCP4-202ENST00000633627 BTN3A2P78410 334 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms