RNA–Protein interactions for RNA: ENST00000633371.1

PHACTR4-209, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 3

Gene PHACTR4, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-209ENST00000633371 REXO4Q9GZR2 422 aaKnown RBP13.52□□□□□ -0.25
PHACTR4-209ENST00000633371 SLC52A3Q9NQ40 469 aa13.52□□□□□ -0.25
PHACTR4-209ENST00000633371 SDR39U1Q9NRG7 319 aaPredicted RBP13.52□□□□□ -0.25
PHACTR4-209ENST00000633371 SOHLH2Q9NX45 425 aa13.52□□□□□ -0.25
PHACTR4-209ENST00000633371 RUVBL1Q9Y265 456 aaKnown RBP13.52□□□□□ -0.25
PHACTR4-209ENST00000633371 A0A0A6YYD5 115 aa13.51□□□□□ -0.25
PHACTR4-209ENST00000633371 FITM1A5D6W6 292 aa13.51□□□□□ -0.25
PHACTR4-209ENST00000633371 ERI3O43414 337 aaKnown RBP13.51□□□□□ -0.25
PHACTR4-209ENST00000633371 TMPRSS11DO60235 418 aa13.51□□□□□ -0.25
PHACTR4-209ENST00000633371 SRPX2O60687 465 aaPredicted RBP13.51□□□□□ -0.25
PHACTR4-209ENST00000633371 CCDC22O60826 627 aa13.51□□□□□ -0.25
PHACTR4-209ENST00000633371 DCTN3O75935 186 aa13.51□□□□□ -0.25
PHACTR4-209ENST00000633371 EIF2S1P05198 315 aaKnown RBP13.51□□□□□ -0.25
PHACTR4-209ENST00000633371 KLK1P06870 262 aa13.51□□□□□ -0.25
PHACTR4-209ENST00000633371 MSL3P1P0C860 447 aa13.51□□□□□ -0.25
PHACTR4-209ENST00000633371 ZNF888P0CJ79 500 aaPredicted RBP13.51□□□□□ -0.25
PHACTR4-209ENST00000633371 T-ENOLP0DO92 83 aa13.51□□□□□ -0.25
PHACTR4-209ENST00000633371 ACPPP15309 386 aa13.51□□□□□ -0.25
PHACTR4-209ENST00000633371 ATP5A1P25705 553 aaKnown RBP13.51□□□□□ -0.25
PHACTR4-209ENST00000633371 PIK3R1P27986 724 aa13.51□□□□□ -0.25
PHACTR4-209ENST00000633371 TIA1P31483 386 aaKnown RBP eCLIP13.51□□□□□ -0.25
PHACTR4-209ENST00000633371 PLA2G16P53816 162 aa13.51□□□□□ -0.25
PHACTR4-209ENST00000633371 NME5P56597 212 aa13.51□□□□□ -0.25
PHACTR4-209ENST00000633371 RAB8AP61006 207 aa13.51□□□□□ -0.25
PHACTR4-209ENST00000633371 UFM1P61960 85 aa13.51□□□□□ -0.25
PHACTR4-209ENST00000633371 ACSM2AQ08AH3 577 aa13.51□□□□□ -0.25
PHACTR4-209ENST00000633371 GSTA3Q16772 222 aa13.51□□□□□ -0.25
PHACTR4-209ENST00000633371 PRSS53Q2L4Q9 553 aa13.51□□□□□ -0.25
PHACTR4-209ENST00000633371 PDCD4Q53EL6 469 aaKnown RBP13.51□□□□□ -0.25
PHACTR4-209ENST00000633371 SPIN4Q56A73 249 aa13.51□□□□□ -0.25
PHACTR4-209ENST00000633371 ACSM2BQ68CK6 577 aa13.51□□□□□ -0.25
PHACTR4-209ENST00000633371 OR4C11Q6IEV9 310 aa13.51□□□□□ -0.25
PHACTR4-209ENST00000633371 MRM1Q6IN84 353 aaKnown RBP13.51□□□□□ -0.25
PHACTR4-209ENST00000633371 PAOXQ6QHF9 649 aa13.51□□□□□ -0.25
PHACTR4-209ENST00000633371 TRPM8Q7Z2W7 1104 aa13.51□□□□□ -0.25
PHACTR4-209ENST00000633371 PDSS2Q86YH6 399 aa13.51□□□□□ -0.25
PHACTR4-209ENST00000633371 CAMKVQ8NCB2 501 aa13.51□□□□□ -0.25
PHACTR4-209ENST00000633371 CLHC1Q8NHS4 586 aa13.51□□□□□ -0.25
PHACTR4-209ENST00000633371 GAL3ST3Q96A11 431 aa13.51□□□□□ -0.25
PHACTR4-209ENST00000633371 ZNF501Q96CX3 271 aaPredicted RBP13.51□□□□□ -0.25
PHACTR4-209ENST00000633371 ERP27Q96DN0 273 aa13.51□□□□□ -0.25
PHACTR4-209ENST00000633371 LRRC37BQ96QE4 947 aa13.51□□□□□ -0.25
PHACTR4-209ENST00000633371 C17orf62Q9BQA9 187 aa13.51□□□□□ -0.25
PHACTR4-209ENST00000633371 DDX31Q9H8H2 851 aaKnown RBP13.51□□□□□ -0.25
PHACTR4-209ENST00000633371 ARL8BQ9NVJ2 186 aa13.51□□□□□ -0.25
PHACTR4-209ENST00000633371 NOP53Q9NZM5 478 aaKnown RBP13.51□□□□□ -0.25
PHACTR4-209ENST00000633371 TMED5Q9Y3A6 229 aa13.51□□□□□ -0.25
PHACTR4-209ENST00000633371 KNTC1P50748 2209 aa13.51□□□□□ -0.25
PHACTR4-209ENST00000633371 TMEM150CB9EJG8 249 aa13.5□□□□□ -0.25
PHACTR4-209ENST00000633371 C9JVG2 144 aa13.5□□□□□ -0.25
PHACTR4-209ENST00000633371 AGRPO00253 132 aa13.5□□□□□ -0.25
PHACTR4-209ENST00000633371 FOXS1O43638 330 aa13.5□□□□□ -0.25
PHACTR4-209ENST00000633371 PCDH7O60245 1069 aa13.5□□□□□ -0.25
PHACTR4-209ENST00000633371 RFPL3O75679 317 aa13.5□□□□□ -0.25
PHACTR4-209ENST00000633371 SCELO95171 688 aa13.5□□□□□ -0.25
PHACTR4-209ENST00000633371 PRPS2P11908 318 aa13.5□□□□□ -0.25
PHACTR4-209ENST00000633371 RGS1Q08116 209 aa13.5□□□□□ -0.25
PHACTR4-209ENST00000633371 ILKQ13418 452 aa13.5□□□□□ -0.25
PHACTR4-209ENST00000633371 SPIDRQ14159 915 aa13.5□□□□□ -0.25
PHACTR4-209ENST00000633371 SQLEQ14534 574 aa13.5□□□□□ -0.25
PHACTR4-209ENST00000633371 PTGR1Q14914 329 aa13.5□□□□□ -0.25
PHACTR4-209ENST00000633371 TRIP6Q15654 476 aaKnown RBP13.5□□□□□ -0.25
PHACTR4-209ENST00000633371 SPRED3Q2MJR0 410 aa13.5□□□□□ -0.25
PHACTR4-209ENST00000633371 MANEAQ5SRI9 462 aa13.5□□□□□ -0.25
PHACTR4-209ENST00000633371 PRAMEF17Q5VTA0 474 aa13.5□□□□□ -0.25
PHACTR4-209ENST00000633371 RIMKLAQ8IXN7 391 aa13.5□□□□□ -0.25
PHACTR4-209ENST00000633371 BMPERQ8N8U9 685 aa13.5□□□□□ -0.25
PHACTR4-209ENST00000633371 ZCCHC10Q8TBK6 192 aa13.5□□□□□ -0.25
PHACTR4-209ENST00000633371 PROKR1Q8TCW9 393 aa13.5□□□□□ -0.25
PHACTR4-209ENST00000633371 C16orf78Q8WTQ4 265 aa13.5□□□□□ -0.25
PHACTR4-209ENST00000633371 UCN3Q969E3 161 aa13.5□□□□□ -0.25
PHACTR4-209ENST00000633371 RERGQ96A58 199 aaPredicted RBP13.5□□□□□ -0.25
PHACTR4-209ENST00000633371 TSSK3Q96PN8 268 aa13.5□□□□□ -0.25
PHACTR4-209ENST00000633371 ZMYND15Q9H091 742 aa13.5□□□□□ -0.25
PHACTR4-209ENST00000633371 NMRK1Q9NWW6 199 aa13.5□□□□□ -0.25
PHACTR4-209ENST00000633371 OCIAD1Q9NX40 245 aa13.5□□□□□ -0.25
PHACTR4-209ENST00000633371 MCM8Q9UJA3 840 aa13.5□□□□□ -0.25
PHACTR4-209ENST00000633371 ADAM29Q9UKF5 820 aa13.5□□□□□ -0.25
PHACTR4-209ENST00000633371 TRIM33Q9UPN9 1127 aa13.5□□□□□ -0.25
PHACTR4-209ENST00000633371 PCDHGA1Q9Y5H4 931 aa13.5□□□□□ -0.25
PHACTR4-209ENST00000633371 UBOX5O94941 541 aa13.49□□□□□ -0.25
PHACTR4-209ENST00000633371 ANXA4P09525 319 aaPredicted RBP13.49□□□□□ -0.25
PHACTR4-209ENST00000633371 SLC35G6P0C7Q6 338 aa13.49□□□□□ -0.25
PHACTR4-209ENST00000633371 IDO1P14902 403 aa13.49□□□□□ -0.25
PHACTR4-209ENST00000633371 ARFIP1P53367 373 aa13.49□□□□□ -0.25
PHACTR4-209ENST00000633371 CLDN8P56748 225 aa13.49□□□□□ -0.25
PHACTR4-209ENST00000633371 STXBP1P61764 594 aaKnown RBP13.49□□□□□ -0.25
PHACTR4-209ENST00000633371 MAD2L1Q13257 205 aaPredicted RBP13.49□□□□□ -0.25
PHACTR4-209ENST00000633371 TRA2AQ13595 282 aaKnown RBP eCLIP13.49□□□□□ -0.25
PHACTR4-209ENST00000633371 RUNX2Q13950 521 aa13.49□□□□□ -0.25
PHACTR4-209ENST00000633371 CCDC157Q569K6 752 aa13.49□□□□□ -0.25
PHACTR4-209ENST00000633371 PHF19Q5T6S3 580 aa13.49□□□□□ -0.25
PHACTR4-209ENST00000633371 FAM71E1Q6IPT2 247 aa13.49□□□□□ -0.25
PHACTR4-209ENST00000633371 GK5Q6ZS86 529 aa13.49□□□□□ -0.25
PHACTR4-209ENST00000633371 MMP21Q8N119 569 aa13.49□□□□□ -0.25
PHACTR4-209ENST00000633371 KRTCAP2Q8N6L1 136 aa13.49□□□□□ -0.25
PHACTR4-209ENST00000633371 ACOT4Q8N9L9 421 aa13.49□□□□□ -0.25
PHACTR4-209ENST00000633371 OR8K5Q8NH50 307 aa13.49□□□□□ -0.25
PHACTR4-209ENST00000633371 TM4SF18Q96CE8 201 aa13.49□□□□□ -0.25
PHACTR4-209ENST00000633371 TBCDQ9BTW9 1192 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms