RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 TRAF3Q13114 568 aa12□□□□□ -0.49
LITAF-221ENST00000622633 NKG7Q16617 165 aa12□□□□□ -0.49
LITAF-221ENST00000622633 MEP1AQ16819 746 aa12□□□□□ -0.49
LITAF-221ENST00000622633 TUSC1Q2TAM9 212 aa12□□□□□ -0.49
LITAF-221ENST00000622633 ANKRD34AQ69YU3 496 aa12□□□□□ -0.49
LITAF-221ENST00000622633 PTRHD1Q6GMV3 140 aaKnown RBP12□□□□□ -0.49
LITAF-221ENST00000622633 CES5AQ6NT32 575 aa12□□□□□ -0.49
LITAF-221ENST00000622633 FUT10Q6P4F1 479 aa12□□□□□ -0.49
LITAF-221ENST00000622633 NCEH1Q6PIU2 408 aa12□□□□□ -0.49
LITAF-221ENST00000622633 C5orf46Q6UWT4 87 aa12□□□□□ -0.49
LITAF-221ENST00000622633 BMP8AQ7Z5Y6 402 aa12□□□□□ -0.49
LITAF-221ENST00000622633 TMEM173Q86WV6 379 aaPredicted RBP12□□□□□ -0.49
LITAF-221ENST00000622633 OR7G3Q8NG95 312 aa12□□□□□ -0.49
LITAF-221ENST00000622633 OR10A6Q8NH74 314 aa12□□□□□ -0.49
LITAF-221ENST00000622633 SLC5A11Q8WWX8 675 aa12□□□□□ -0.49
LITAF-221ENST00000622633 RBPMSQ93062 196 aaKnown RBP12□□□□□ -0.49
LITAF-221ENST00000622633 LINC00052Q96N35 136 aa12□□□□□ -0.49
LITAF-221ENST00000622633 TBCDQ9BTW9 1192 aa12□□□□□ -0.49
LITAF-221ENST00000622633 THUMPD3Q9BV44 507 aaKnown RBP12□□□□□ -0.49
LITAF-221ENST00000622633 BOCQ9BWV1 1114 aa12□□□□□ -0.49
LITAF-221ENST00000622633 GPR63Q9BZJ6 419 aa12□□□□□ -0.49
LITAF-221ENST00000622633 RACGAP1Q9H0H5 632 aa12□□□□□ -0.49
LITAF-221ENST00000622633 DCSTAMPQ9H295 470 aa12□□□□□ -0.49
LITAF-221ENST00000622633 GSN-AS1Q9NRJ2 163 aa12□□□□□ -0.49
LITAF-221ENST00000622633 TMEM45AQ9NWC5 275 aa12□□□□□ -0.49
LITAF-221ENST00000622633 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12□□□□□ -0.49
LITAF-221ENST00000622633 KLHL21Q9UJP4 597 aa12□□□□□ -0.49
LITAF-221ENST00000622633 UTS2RQ9UKP6 389 aa12□□□□□ -0.49
LITAF-221ENST00000622633 PCDHGB2Q9Y5G2 931 aa12□□□□□ -0.49
LITAF-221ENST00000622633 A0A1B0GWJ7 208 aa11.99□□□□□ -0.49
LITAF-221ENST00000622633 PRMT5O14744 637 aaPredicted RBP11.99□□□□□ -0.49
LITAF-221ENST00000622633 TAPBPO15533 448 aa11.99□□□□□ -0.49
LITAF-221ENST00000622633 TBC1D4O60343 1298 aa11.99□□□□□ -0.49
LITAF-221ENST00000622633 TULP3O75386 442 aa11.99□□□□□ -0.49
LITAF-221ENST00000622633 CLN5O75503 358 aa11.99□□□□□ -0.49
LITAF-221ENST00000622633 UGT2B17O75795 530 aa11.99□□□□□ -0.49
LITAF-221ENST00000622633 MED26O95402 600 aa11.99□□□□□ -0.49
LITAF-221ENST00000622633 ALPIP09923 528 aa11.99□□□□□ -0.49
LITAF-221ENST00000622633 THRBP10828 461 aa11.99□□□□□ -0.49
LITAF-221ENST00000622633 AGXTP21549 392 aa11.99□□□□□ -0.49
LITAF-221ENST00000622633 POU1F1P28069 291 aa11.99□□□□□ -0.49
LITAF-221ENST00000622633 POU3F4P49335 361 aa11.99□□□□□ -0.49
LITAF-221ENST00000622633 GDI2P50395 445 aaKnown RBP11.99□□□□□ -0.49
LITAF-221ENST00000622633 UGT2B15P54855 530 aa11.99□□□□□ -0.49
LITAF-221ENST00000622633 DAB2P98082 770 aa11.99□□□□□ -0.49
LITAF-221ENST00000622633 PPP1R8Q12972 351 aaKnown RBP11.99□□□□□ -0.49
LITAF-221ENST00000622633 KIAA0040Q15053 153 aa11.99□□□□□ -0.49
LITAF-221ENST00000622633 GRK1Q15835 563 aa11.99□□□□□ -0.49
LITAF-221ENST00000622633 ATXN7L2Q5T6C5 722 aaPredicted RBP11.99□□□□□ -0.49
LITAF-221ENST00000622633 FAM151BQ6UXP7 276 aa11.99□□□□□ -0.49
LITAF-221ENST00000622633 CEP68Q76N32 757 aa11.99□□□□□ -0.49
LITAF-221ENST00000622633 MAMDC2Q7Z304 686 aaPredicted RBP11.99□□□□□ -0.49
LITAF-221ENST00000622633 TMC8Q8IU68 726 aa11.99□□□□□ -0.49
LITAF-221ENST00000622633 HS3ST5Q8IZT8 346 aa11.99□□□□□ -0.49
LITAF-221ENST00000622633 OR6M1Q8NGM8 313 aa11.99□□□□□ -0.49
LITAF-221ENST00000622633 LKAAEAR1Q8TD35 194 aa11.99□□□□□ -0.49
LITAF-221ENST00000622633 PCNPQ8WW12 178 aaKnown RBP11.99□□□□□ -0.49
LITAF-221ENST00000622633 FAM126AQ9BYI3 521 aaPredicted RBP11.99□□□□□ -0.49
LITAF-221ENST00000622633 CIPCQ9C0C6 399 aa11.99□□□□□ -0.49
LITAF-221ENST00000622633 IKZF5Q9H5V7 419 aa11.99□□□□□ -0.49
LITAF-221ENST00000622633 SMPD4Q9NXE4 827 aa11.99□□□□□ -0.49
LITAF-221ENST00000622633 IL17CQ9P0M4 197 aa11.99□□□□□ -0.49
LITAF-221ENST00000622633 LIMD1Q9UGP4 676 aa11.99□□□□□ -0.49
LITAF-221ENST00000622633 MKLN1Q9UL63 735 aa11.99□□□□□ -0.49
LITAF-221ENST00000622633 ACSL5Q9ULC5 683 aa11.99□□□□□ -0.49
LITAF-221ENST00000622633 PKP3Q9Y446 797 aa11.99□□□□□ -0.49
LITAF-221ENST00000622633 CCL27Q9Y4X3 112 aa11.99□□□□□ -0.49
LITAF-221ENST00000622633 ZNF840PA6NDX5 716 aa11.99□□□□□ -0.49
LITAF-221ENST00000622633 GRXCR2A6NFK2 248 aa11.99□□□□□ -0.49
LITAF-221ENST00000622633 G3V2T6 193 aa11.99□□□□□ -0.49
LITAF-221ENST00000622633 H0Y626 953 aa11.99□□□□□ -0.49
LITAF-221ENST00000622633 H7C0S8 307 aa11.99□□□□□ -0.49
LITAF-221ENST00000622633 HS6ST1O60243 411 aa11.99□□□□□ -0.49
LITAF-221ENST00000622633 NOBOXO60393 691 aa11.99□□□□□ -0.49
LITAF-221ENST00000622633 PSIP1O75475 530 aaKnown RBP11.99□□□□□ -0.49
LITAF-221ENST00000622633 STC2O76061 302 aa11.99□□□□□ -0.49
LITAF-221ENST00000622633 PRSS23O95084 383 aa11.99□□□□□ -0.49
LITAF-221ENST00000622633 OTCP00480 354 aa11.99□□□□□ -0.49
LITAF-221ENST00000622633 PRKAR2AP13861 404 aaKnown RBP11.99□□□□□ -0.49
LITAF-221ENST00000622633 CCT3P49368 545 aaKnown RBP11.99□□□□□ -0.49
LITAF-221ENST00000622633 FCGRTP55899 365 aa11.99□□□□□ -0.49
LITAF-221ENST00000622633 EEF1A1P68104 462 aaKnown RBP11.99□□□□□ -0.49
LITAF-221ENST00000622633 HMGCS1Q01581 520 aa11.99□□□□□ -0.49
LITAF-221ENST00000622633 EEF1A2Q05639 463 aaKnown RBP11.99□□□□□ -0.49
LITAF-221ENST00000622633 CACNG1Q06432 222 aa11.99□□□□□ -0.49
LITAF-221ENST00000622633 HKDC1Q2TB90 917 aa11.99□□□□□ -0.49
LITAF-221ENST00000622633 CTU2Q2VPK5 515 aaKnown RBP11.99□□□□□ -0.49
LITAF-221ENST00000622633 FAM174BQ3ZCQ3 159 aa11.99□□□□□ -0.49
LITAF-221ENST00000622633 EEF1A1P5Q5VTE0 462 aa11.99□□□□□ -0.49
LITAF-221ENST00000622633 CXorf57Q6NSI4 855 aaKnown RBP11.99□□□□□ -0.49
LITAF-221ENST00000622633 SNX20Q7Z614 316 aa11.99□□□□□ -0.49
LITAF-221ENST00000622633 ZDHHC13Q8IUH4 622 aa11.99□□□□□ -0.49
LITAF-221ENST00000622633 CLDN19Q8N6F1 224 aa11.99□□□□□ -0.49
LITAF-221ENST00000622633 PCSK9Q8NBP7 692 aaKnown RBP11.99□□□□□ -0.49
LITAF-221ENST00000622633 OR2T12Q8NG77 320 aa11.99□□□□□ -0.49
LITAF-221ENST00000622633 SLC13A3Q8WWT9 602 aa11.99□□□□□ -0.49
LITAF-221ENST00000622633 PDLIM5Q96HC4 596 aaKnown RBP11.99□□□□□ -0.49
LITAF-221ENST00000622633 APOL4Q9BPW4 351 aa11.99□□□□□ -0.49
LITAF-221ENST00000622633 CCDC90BQ9GZT6 254 aa11.99□□□□□ -0.49
LITAF-221ENST00000622633 NXF2Q9GZY0 626 aaKnown RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms