RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 CTSBP07858 339 aa16.96■□□□□ 0.3
PTCHD3-202ENST00000622555 ANXA4P09525 319 aaPredicted RBP16.96■□□□□ 0.3
PTCHD3-202ENST00000622555 ZNF888P0CJ79 500 aaPredicted RBP16.96■□□□□ 0.3
PTCHD3-202ENST00000622555 PRPS2P11908 318 aa16.96■□□□□ 0.3
PTCHD3-202ENST00000622555 SDC1P18827 310 aa16.96■□□□□ 0.3
PTCHD3-202ENST00000622555 BSGP35613 385 aa16.96■□□□□ 0.3
PTCHD3-202ENST00000622555 SSR2P43308 183 aa16.96■□□□□ 0.3
PTCHD3-202ENST00000622555 RAB8AP61006 207 aa16.96■□□□□ 0.3
PTCHD3-202ENST00000622555 GPR19Q15760 415 aa16.96■□□□□ 0.3
PTCHD3-202ENST00000622555 MANEAQ5SRI9 462 aa16.96■□□□□ 0.3
PTCHD3-202ENST00000622555 ABHD17CQ6PCB6 329 aa16.96■□□□□ 0.3
PTCHD3-202ENST00000622555 PAGE2Q7Z2X7 111 aa16.96■□□□□ 0.3
PTCHD3-202ENST00000622555 SLITRK4Q8IW52 837 aa16.96■□□□□ 0.3
PTCHD3-202ENST00000622555 KCNC2Q96PR1 638 aa16.96■□□□□ 0.3
PTCHD3-202ENST00000622555 CCDC106Q9BWC9 280 aa16.96■□□□□ 0.3
PTCHD3-202ENST00000622555 ZNF717Q9BY31 904 aaPredicted RBP16.96■□□□□ 0.3
PTCHD3-202ENST00000622555 SDR39U1Q9NRG7 319 aaPredicted RBP16.96■□□□□ 0.3
PTCHD3-202ENST00000622555 SIRT5Q9NXA8 310 aa16.96■□□□□ 0.3
PTCHD3-202ENST00000622555 BAIAP2L1Q9UHR4 511 aa16.96■□□□□ 0.3
PTCHD3-202ENST00000622555 TMEM150CB9EJG8 249 aa16.95■□□□□ 0.3
PTCHD3-202ENST00000622555 H0YHG0 523 aa16.95■□□□□ 0.3
PTCHD3-202ENST00000622555 PSMD12O00232 456 aaPredicted RBP16.95■□□□□ 0.3
PTCHD3-202ENST00000622555 AGRPO00253 132 aa16.95■□□□□ 0.3
PTCHD3-202ENST00000622555 ATP5HO75947 161 aa16.95■□□□□ 0.3
PTCHD3-202ENST00000622555 UNC5CO95185 931 aa16.95■□□□□ 0.3
PTCHD3-202ENST00000622555 FOLR1P15328 257 aa16.95■□□□□ 0.3
PTCHD3-202ENST00000622555 IRX1P78414 480 aaPredicted RBP16.95■□□□□ 0.3
PTCHD3-202ENST00000622555 KLF10Q13118 480 aa16.95■□□□□ 0.3
PTCHD3-202ENST00000622555 ILKQ13418 452 aa16.95■□□□□ 0.3
PTCHD3-202ENST00000622555 PTGR1Q14914 329 aa16.95■□□□□ 0.3
PTCHD3-202ENST00000622555 PDCD4Q53EL6 469 aaKnown RBP16.95■□□□□ 0.3
PTCHD3-202ENST00000622555 FBXW10Q5XX13 1052 aa16.95■□□□□ 0.3
PTCHD3-202ENST00000622555 OR4C11Q6IEV9 310 aa16.95■□□□□ 0.3
PTCHD3-202ENST00000622555 GALNT18Q6P9A2 607 aa16.95■□□□□ 0.3
PTCHD3-202ENST00000622555 ABHD13Q7L211 337 aa16.95■□□□□ 0.3
PTCHD3-202ENST00000622555 NUDT13Q86X67 352 aa16.95■□□□□ 0.3
PTCHD3-202ENST00000622555 CLHC1Q8NHS4 586 aa16.95■□□□□ 0.3
PTCHD3-202ENST00000622555 UTP15Q8TED0 518 aaKnown RBP16.95■□□□□ 0.3
PTCHD3-202ENST00000622555 QRFPRQ96P65 431 aa16.95■□□□□ 0.3
PTCHD3-202ENST00000622555 LHX9Q9NQ69 397 aa16.95■□□□□ 0.3
PTCHD3-202ENST00000622555 MCM8Q9UJA3 840 aa16.95■□□□□ 0.3
PTCHD3-202ENST00000622555 FAM186AA6NE01 2351 aa16.95■□□□□ 0.3
PTCHD3-202ENST00000622555 ARHGAP10A1A4S6 786 aa16.94■□□□□ 0.3
PTCHD3-202ENST00000622555 EEDO75530 441 aaKnown RBP16.94■□□□□ 0.3
PTCHD3-202ENST00000622555 GPX3P22352 226 aa16.94■□□□□ 0.3
PTCHD3-202ENST00000622555 TACR1P25103 407 aa16.94■□□□□ 0.3
PTCHD3-202ENST00000622555 PIK3R1P27986 724 aa16.94■□□□□ 0.3
PTCHD3-202ENST00000622555 ARFIP1P53367 373 aa16.94■□□□□ 0.3
PTCHD3-202ENST00000622555 E2F1Q01094 437 aa16.94■□□□□ 0.3
PTCHD3-202ENST00000622555 TRIP6Q15654 476 aaKnown RBP16.94■□□□□ 0.3
PTCHD3-202ENST00000622555 PRTGQ2VWP7 1150 aa16.94■□□□□ 0.3
PTCHD3-202ENST00000622555 TCTE1Q5JU00 501 aa16.94■□□□□ 0.3
PTCHD3-202ENST00000622555 CCNYL2Q5T2Q4 361 aa16.94■□□□□ 0.3
PTCHD3-202ENST00000622555 PAOXQ6QHF9 649 aa16.94■□□□□ 0.3
PTCHD3-202ENST00000622555 RBM44Q6ZP01 1051 aaKnown RBP16.94■□□□□ 0.3
PTCHD3-202ENST00000622555 B3GNT8Q7Z7M8 397 aa16.94■□□□□ 0.3
PTCHD3-202ENST00000622555 TREML1Q86YW5 311 aa16.94■□□□□ 0.3
PTCHD3-202ENST00000622555 CDC26Q8NHZ8 85 aa16.94■□□□□ 0.3
PTCHD3-202ENST00000622555 SLC45A3Q96JT2 553 aa16.94■□□□□ 0.3
PTCHD3-202ENST00000622555 ZNF285Q96NJ3 590 aa16.94■□□□□ 0.3
PTCHD3-202ENST00000622555 TSSK3Q96PN8 268 aa16.94■□□□□ 0.3
PTCHD3-202ENST00000622555 TEFMQ96QE5 360 aaKnown RBP16.94■□□□□ 0.3
PTCHD3-202ENST00000622555 TBCDQ9BTW9 1192 aa16.94■□□□□ 0.3
PTCHD3-202ENST00000622555 COPS7BQ9H9Q2 264 aaPredicted RBP16.94■□□□□ 0.3
PTCHD3-202ENST00000622555 ADAM29Q9UKF5 820 aa16.94■□□□□ 0.3
PTCHD3-202ENST00000622555 COL27A1Q8IZC6 1860 aaPredicted RBP16.94■□□□□ 0.3
PTCHD3-202ENST00000622555 SLC22A2O15244 555 aa16.93■□□□□ 0.3
PTCHD3-202ENST00000622555 T-ENOLP0DO92 83 aa16.93■□□□□ 0.3
PTCHD3-202ENST00000622555 TPP2P29144 1249 aaPredicted RBP16.93■□□□□ 0.3
PTCHD3-202ENST00000622555 ADSLP30566 484 aaPredicted RBP16.93■□□□□ 0.3
PTCHD3-202ENST00000622555 MRPL19P49406 292 aaKnown RBP16.93■□□□□ 0.3
PTCHD3-202ENST00000622555 LIMK1P53667 647 aa16.93■□□□□ 0.3
PTCHD3-202ENST00000622555 UFM1P61960 85 aa16.93■□□□□ 0.3
PTCHD3-202ENST00000622555 TRA2AQ13595 282 aaKnown RBP eCLIP16.93■□□□□ 0.3
PTCHD3-202ENST00000622555 COL9A2Q14055 689 aaPredicted RBP16.93■□□□□ 0.3
PTCHD3-202ENST00000622555 AGKQ53H12 422 aa16.93■□□□□ 0.3
PTCHD3-202ENST00000622555 FAM91A1Q658Y4 838 aa16.93■□□□□ 0.3
PTCHD3-202ENST00000622555 TMEM214Q6NUQ4 689 aaKnown RBP16.93■□□□□ 0.3
PTCHD3-202ENST00000622555 RIPOR1Q6ZS17 1223 aa16.93■□□□□ 0.3
PTCHD3-202ENST00000622555 FAM9CQ8IZT9 166 aa16.93■□□□□ 0.3
PTCHD3-202ENST00000622555 DEFB124Q8NES8 71 aa16.93■□□□□ 0.3
PTCHD3-202ENST00000622555 OR9I1Q8NGQ6 314 aa16.93■□□□□ 0.3
PTCHD3-202ENST00000622555 OR8K5Q8NH50 307 aa16.93■□□□□ 0.3
PTCHD3-202ENST00000622555 SPRTNQ9H040 489 aaPredicted RBP16.93■□□□□ 0.3
PTCHD3-202ENST00000622555 DDX31Q9H8H2 851 aaKnown RBP16.93■□□□□ 0.3
PTCHD3-202ENST00000622555 FANCEQ9HB96 536 aa16.93■□□□□ 0.3
PTCHD3-202ENST00000622555 PRDM7Q9NQW5 492 aa16.93■□□□□ 0.3
PTCHD3-202ENST00000622555 TXLNGQ9NUQ3 528 aa16.93■□□□□ 0.3
PTCHD3-202ENST00000622555 ZIM2Q9NZV7 527 aa16.93■□□□□ 0.3
PTCHD3-202ENST00000622555 MRPS2Q9Y399 296 aaKnown RBP16.93■□□□□ 0.3
PTCHD3-202ENST00000622555 ZNF292O60281 2723 aa16.93■□□□□ 0.3
PTCHD3-202ENST00000622555 CAPN14A8MX76 684 aa16.93■□□□□ 0.3
PTCHD3-202ENST00000622555 SLC22A3O75751 556 aa16.93■□□□□ 0.3
PTCHD3-202ENST00000622555 OR2B3O76000 313 aa16.93■□□□□ 0.3
PTCHD3-202ENST00000622555 B3GALT4O96024 378 aa16.93■□□□□ 0.3
PTCHD3-202ENST00000622555 MSL3P1P0C860 447 aa16.93■□□□□ 0.3
PTCHD3-202ENST00000622555 NQO1P15559 274 aaKnown RBP16.93■□□□□ 0.3
PTCHD3-202ENST00000622555 ALOX12P18054 663 aa16.93■□□□□ 0.3
PTCHD3-202ENST00000622555 MAPK12P53778 367 aa16.93■□□□□ 0.3
PTCHD3-202ENST00000622555 SNRPNP63162 240 aaKnown RBP16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms