RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 MED31Q9Y3C7 131 aa8.9□□□□□ -0.98
GGA3-223ENST00000621870 OAS3Q9Y6K5 1087 aaKnown RBP8.9□□□□□ -0.98
GGA3-223ENST00000621870 ACACAQ13085 2346 aa8.9□□□□□ -0.98
GGA3-223ENST00000621870 POLR1CO15160 346 aaPredicted RBP8.9□□□□□ -0.99
GGA3-223ENST00000621870 NOBOXO60393 691 aa8.9□□□□□ -0.99
GGA3-223ENST00000621870 PDYNP01213 254 aa8.9□□□□□ -0.99
GGA3-223ENST00000621870 HRH2P25021 359 aa8.9□□□□□ -0.99
GGA3-223ENST00000621870 CD6P30203 668 aa8.9□□□□□ -0.99
GGA3-223ENST00000621870 OTX2P32243 289 aa8.9□□□□□ -0.99
GGA3-223ENST00000621870 ADAM17P78536 824 aa8.9□□□□□ -0.99
GGA3-223ENST00000621870 CTBSQ01459 385 aa8.9□□□□□ -0.99
GGA3-223ENST00000621870 COX10Q12887 443 aa8.9□□□□□ -0.99
GGA3-223ENST00000621870 C16orf72Q14CZ0 275 aa8.9□□□□□ -0.99
GGA3-223ENST00000621870 OR4D1Q15615 310 aa8.9□□□□□ -0.99
GGA3-223ENST00000621870 DGUOKQ16854 277 aa8.9□□□□□ -0.99
GGA3-223ENST00000621870 TRIM71Q2Q1W2 868 aaKnown RBP8.9□□□□□ -0.99
GGA3-223ENST00000621870 UNC50Q53HI1 259 aa8.9□□□□□ -0.99
GGA3-223ENST00000621870 ARMC3Q5W041 872 aa8.9□□□□□ -0.99
GGA3-223ENST00000621870 PIGWQ7Z7B1 504 aa8.9□□□□□ -0.99
GGA3-223ENST00000621870 HMGN2P46Q86SG4 172 aa8.9□□□□□ -0.99
GGA3-223ENST00000621870 SDR16C5Q8N3Y7 309 aa8.9□□□□□ -0.99
GGA3-223ENST00000621870 HUS1BQ8NHY5 278 aa8.9□□□□□ -0.99
GGA3-223ENST00000621870 CAMK1GQ96NX5 476 aa8.9□□□□□ -0.99
GGA3-223ENST00000621870 SEC61A2Q9H9S3 476 aa8.9□□□□□ -0.99
GGA3-223ENST00000621870 CENPMQ9NSP4 180 aa8.9□□□□□ -0.99
GGA3-223ENST00000621870 THUMPD1Q9NXG2 353 aaKnown RBP8.9□□□□□ -0.99
GGA3-223ENST00000621870 SLC7A8Q9UHI5 535 aa8.9□□□□□ -0.99
GGA3-223ENST00000621870 AKAP11Q9UKA4 1901 aa8.9□□□□□ -0.99
GGA3-223ENST00000621870 FADS2O95864 444 aaKnown RBP8.89□□□□□ -0.99
GGA3-223ENST00000621870 FGF3P11487 239 aaPredicted RBP8.89□□□□□ -0.99
GGA3-223ENST00000621870 BCKDHAP12694 445 aa8.89□□□□□ -0.99
GGA3-223ENST00000621870 HMGA1P17096 107 aaKnown RBP8.89□□□□□ -0.99
GGA3-223ENST00000621870 MYL9P24844 172 aa8.89□□□□□ -0.99
GGA3-223ENST00000621870 SLC18A1P54219 525 aa8.89□□□□□ -0.99
GGA3-223ENST00000621870 OR4D2P58180 307 aa8.89□□□□□ -0.99
GGA3-223ENST00000621870 CDK3Q00526 305 aa8.89□□□□□ -0.99
GGA3-223ENST00000621870 C18orf21Q32NC0 220 aaPredicted RBP8.89□□□□□ -0.99
GGA3-223ENST00000621870 GPR107Q5VW38 600 aa8.89□□□□□ -0.99
GGA3-223ENST00000621870 FAM180BQ6P0A1 224 aa8.89□□□□□ -0.99
GGA3-223ENST00000621870 NXPE4Q6UWF7 544 aa8.89□□□□□ -0.99
GGA3-223ENST00000621870 CXXC5Q7LFL8 322 aaKnown RBP8.89□□□□□ -0.99
GGA3-223ENST00000621870 GALNT7Q86SF2 657 aa8.89□□□□□ -0.99
GGA3-223ENST00000621870 RNF130Q86XS8 419 aa8.89□□□□□ -0.99
GGA3-223ENST00000621870 ARRDC2Q8TBH0 407 aa8.89□□□□□ -0.99
GGA3-223ENST00000621870 ADAMTS19Q8TE59 1207 aa8.89□□□□□ -0.99
GGA3-223ENST00000621870 LRCH3Q96II8 777 aa8.89□□□□□ -0.99
GGA3-223ENST00000621870 PTGES2Q9H7Z7 377 aa8.89□□□□□ -0.99
GGA3-223ENST00000621870 ZBTB20Q9HC78 741 aaPredicted RBP8.89□□□□□ -0.99
GGA3-223ENST00000621870 CCNB1IP1Q9NPC3 277 aa8.89□□□□□ -0.99
GGA3-223ENST00000621870 GALNT8Q9NY28 637 aa8.89□□□□□ -0.99
GGA3-223ENST00000621870 WASH4PA8MWX3 477 aa8.89□□□□□ -0.99
GGA3-223ENST00000621870 KLF11O14901 512 aa8.89□□□□□ -0.99
GGA3-223ENST00000621870 PGRMC2O15173 223 aa8.89□□□□□ -0.99
GGA3-223ENST00000621870 SLC16A5O15375 505 aa8.89□□□□□ -0.99
GGA3-223ENST00000621870 HCRTR2O43614 444 aa8.89□□□□□ -0.99
GGA3-223ENST00000621870 SCO2O43819 266 aa8.89□□□□□ -0.99
GGA3-223ENST00000621870 TYROBPO43914 113 aa8.89□□□□□ -0.99
GGA3-223ENST00000621870 RAP2AP10114 183 aa8.89□□□□□ -0.99
GGA3-223ENST00000621870 FBLP22087 321 aaKnown RBP8.89□□□□□ -0.99
GGA3-223ENST00000621870 DNAJB1P25685 340 aa8.89□□□□□ -0.99
GGA3-223ENST00000621870 ABHD18Q0P651 414 aa8.89□□□□□ -0.99
GGA3-223ENST00000621870 GRB7Q14451 532 aa8.89□□□□□ -0.99
GGA3-223ENST00000621870 ISCA2Q86U28 154 aa8.89□□□□□ -0.99
GGA3-223ENST00000621870 NRROSQ86YC3 692 aa8.89□□□□□ -0.99
GGA3-223ENST00000621870 RELL1Q8IUW5 271 aa8.89□□□□□ -0.99
GGA3-223ENST00000621870 KLHDC8AQ8IYD2 350 aa8.89□□□□□ -0.99
GGA3-223ENST00000621870 ACVR1CQ8NER5 493 aa8.89□□□□□ -0.99
GGA3-223ENST00000621870 DAZLQ92904 295 aaKnown RBP8.89□□□□□ -0.99
GGA3-223ENST00000621870 RIT1Q92963 219 aa8.89□□□□□ -0.99
GGA3-223ENST00000621870 MYRFLQ96LU7 910 aa8.89□□□□□ -0.99
GGA3-223ENST00000621870 IL4I1Q96RQ9 567 aa8.89□□□□□ -0.99
GGA3-223ENST00000621870 LPAR4Q99677 370 aa8.89□□□□□ -0.99
GGA3-223ENST00000621870 SSR3Q9UNL2 185 aa8.89□□□□□ -0.99
GGA3-223ENST00000621870 DCNP07585 359 aaKnown RBP8.89□□□□□ -0.99
GGA3-223ENST00000621870 MATN1P21941 496 aa8.89□□□□□ -0.99
GGA3-223ENST00000621870 FDXRP22570 491 aa8.89□□□□□ -0.99
GGA3-223ENST00000621870 PEX2P28328 305 aa8.89□□□□□ -0.99
GGA3-223ENST00000621870 HOXC13P31276 330 aa8.89□□□□□ -0.99
GGA3-223ENST00000621870 TIA1P31483 386 aaKnown RBP eCLIP8.89□□□□□ -0.99
GGA3-223ENST00000621870 TTKP33981 857 aa8.89□□□□□ -0.99
GGA3-223ENST00000621870 GNALP38405 381 aa8.89□□□□□ -0.99
GGA3-223ENST00000621870 RNF144AP50876 292 aaPredicted RBP8.89□□□□□ -0.99
GGA3-223ENST00000621870 SGSHP51688 502 aa8.89□□□□□ -0.99
GGA3-223ENST00000621870 EEFSECP57772 596 aaKnown RBP8.89□□□□□ -0.99
GGA3-223ENST00000621870 SNTA1Q13424 505 aa8.89□□□□□ -0.99
GGA3-223ENST00000621870 MLF2Q15773 248 aaPredicted RBP8.89□□□□□ -0.99
GGA3-223ENST00000621870 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.89□□□□□ -0.99
GGA3-223ENST00000621870 CEP78Q5JTW2 689 aa8.89□□□□□ -0.99
GGA3-223ENST00000621870 C6orf52Q5T4I8 152 aa8.89□□□□□ -0.99
GGA3-223ENST00000621870 TMPRSS11AQ6ZMR5 421 aa8.89□□□□□ -0.99
GGA3-223ENST00000621870 BTN2A1Q7KYR7 527 aa8.89□□□□□ -0.99
GGA3-223ENST00000621870 CBARPQ8N350 705 aaPredicted RBP8.89□□□□□ -0.99
GGA3-223ENST00000621870 OR10H4Q8NGA5 316 aa8.89□□□□□ -0.99
GGA3-223ENST00000621870 EZH1Q92800 747 aaPredicted RBP8.89□□□□□ -0.99
GGA3-223ENST00000621870 RTP4Q96DX8 246 aa8.89□□□□□ -0.99
GGA3-223ENST00000621870 ASB16Q96NS5 453 aa8.89□□□□□ -0.99
GGA3-223ENST00000621870 TRIM8Q9BZR9 551 aa8.89□□□□□ -0.99
GGA3-223ENST00000621870 CWH43Q9H720 699 aa8.89□□□□□ -0.99
GGA3-223ENST00000621870 RPF2Q9H7B2 306 aaKnown RBP8.89□□□□□ -0.99
GGA3-223ENST00000621870 PLEKHA1Q9HB21 404 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms