RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 PIAS4Q8N2W9 510 aaPredicted RBP9.99□□□□□ -0.81
VPS11-207ENST00000620429 STPG2Q8N412 459 aa9.99□□□□□ -0.81
VPS11-207ENST00000620429 LRRC52Q8N7C0 313 aa9.99□□□□□ -0.81
VPS11-207ENST00000620429 C2CD4AQ8NCU7 369 aaPredicted RBP9.99□□□□□ -0.81
VPS11-207ENST00000620429 LPCAT1Q8NF37 534 aa9.99□□□□□ -0.81
VPS11-207ENST00000620429 OR2T4Q8NH00 348 aa9.99□□□□□ -0.81
VPS11-207ENST00000620429 TCEAL3Q969E4 200 aa9.99□□□□□ -0.81
VPS11-207ENST00000620429 CREB3L1Q96BA8 519 aa9.99□□□□□ -0.81
VPS11-207ENST00000620429 BBS4Q96RK4 519 aa9.99□□□□□ -0.81
VPS11-207ENST00000620429 DPH7Q9BTV6 452 aa9.99□□□□□ -0.81
VPS11-207ENST00000620429 ZNF436Q9C0F3 470 aaPredicted RBP9.99□□□□□ -0.81
VPS11-207ENST00000620429 MAGIXQ9H6Y5 334 aa9.99□□□□□ -0.81
VPS11-207ENST00000620429 EQTNQ9NQ60 294 aa9.99□□□□□ -0.81
VPS11-207ENST00000620429 ENTPD4Q9Y227 616 aa9.99□□□□□ -0.81
VPS11-207ENST00000620429 PIN4Q9Y237 131 aaKnown RBP9.99□□□□□ -0.81
VPS11-207ENST00000620429 GPR45Q9Y5Y3 372 aa9.99□□□□□ -0.81
VPS11-207ENST00000620429 PTGDR2Q9Y5Y4 395 aa9.99□□□□□ -0.81
VPS11-207ENST00000620429 ZSWIM8A7E2V4 1837 aa9.99□□□□□ -0.81
VPS11-207ENST00000620429 TRAV19A0A0A6YYK7 116 aa9.99□□□□□ -0.81
VPS11-207ENST00000620429 FAM240BA0A1B0GVZ2 78 aa9.99□□□□□ -0.81
VPS11-207ENST00000620429 FABP12A6NFH5 140 aa9.99□□□□□ -0.81
VPS11-207ENST00000620429 DBX1A6NMT0 343 aa9.99□□□□□ -0.81
VPS11-207ENST00000620429 E9PQ18 207 aa9.99□□□□□ -0.81
VPS11-207ENST00000620429 SCAMP3O14828 347 aaKnown RBP9.99□□□□□ -0.81
VPS11-207ENST00000620429 BEST1O76090 585 aa9.99□□□□□ -0.81
VPS11-207ENST00000620429 F2P00734 622 aa9.99□□□□□ -0.81
VPS11-207ENST00000620429 PRKAR1AP10644 381 aa9.99□□□□□ -0.81
VPS11-207ENST00000620429 S100PP25815 95 aa9.99□□□□□ -0.81
VPS11-207ENST00000620429 GPR17Q13304 367 aa9.99□□□□□ -0.81
VPS11-207ENST00000620429 SWI5Q1ZZU3 235 aa9.99□□□□□ -0.81
VPS11-207ENST00000620429 ZNF789Q5FWF6 425 aa9.99□□□□□ -0.81
VPS11-207ENST00000620429 C9orf57Q5W0N0 161 aa9.99□□□□□ -0.81
VPS11-207ENST00000620429 OR7E24Q6IFN5 339 aa9.99□□□□□ -0.81
VPS11-207ENST00000620429 GPR153Q6NV75 609 aa9.99□□□□□ -0.81
VPS11-207ENST00000620429 EIF3MQ7L2H7 374 aaKnown RBP9.99□□□□□ -0.81
VPS11-207ENST00000620429 GALNT5Q7Z7M9 940 aa9.99□□□□□ -0.81
VPS11-207ENST00000620429 ATCAYQ86WG3 371 aa9.99□□□□□ -0.81
VPS11-207ENST00000620429 SLC22A9Q8IVM8 553 aa9.99□□□□□ -0.81
VPS11-207ENST00000620429 UBE2J2Q8N2K1 259 aa9.99□□□□□ -0.81
VPS11-207ENST00000620429 PNPLA1Q8N8W4 532 aa9.99□□□□□ -0.81
VPS11-207ENST00000620429 TTC29Q8NA56 475 aaPredicted RBP9.99□□□□□ -0.81
VPS11-207ENST00000620429 EXT2Q93063 718 aa9.99□□□□□ -0.81
VPS11-207ENST00000620429 PGAP3Q96FM1 320 aaPredicted RBP9.99□□□□□ -0.81
VPS11-207ENST00000620429 EXOC2Q96KP1 924 aa9.99□□□□□ -0.81
VPS11-207ENST00000620429 HTATIP2Q9BUP3 242 aa9.99□□□□□ -0.81
VPS11-207ENST00000620429 OR51M1Q9H341 326 aa9.99□□□□□ -0.81
VPS11-207ENST00000620429 ATXN3LQ9H3M9 355 aa9.99□□□□□ -0.81
VPS11-207ENST00000620429 PIF1Q9H611 641 aa9.99□□□□□ -0.81
VPS11-207ENST00000620429 ALG9Q9H6U8 611 aa9.99□□□□□ -0.81
VPS11-207ENST00000620429 GAREM1Q9H706 876 aa9.99□□□□□ -0.81
VPS11-207ENST00000620429 NT5DC2Q9H857 520 aa9.99□□□□□ -0.81
VPS11-207ENST00000620429 NLKQ9UBE8 527 aa9.99□□□□□ -0.81
VPS11-207ENST00000620429 AAR2Q9Y312 384 aaKnown RBP9.99□□□□□ -0.81
VPS11-207ENST00000620429 CLCA3PQ9Y6N3 262 aa9.99□□□□□ -0.81
VPS11-207ENST00000620429 DOCK3Q8IZD9 2030 aa9.99□□□□□ -0.81
VPS11-207ENST00000620429 A0A1B0GTQ1 180 aa9.98□□□□□ -0.81
VPS11-207ENST00000620429 INMT-MINDY4F8WBC2 141 aa9.98□□□□□ -0.81
VPS11-207ENST00000620429 PCDHGA12O60330 932 aa9.98□□□□□ -0.81
VPS11-207ENST00000620429 ADAMTS4O75173 837 aa9.98□□□□□ -0.81
VPS11-207ENST00000620429 POP4O95707 220 aaKnown RBP9.98□□□□□ -0.81
VPS11-207ENST00000620429 ITGB1P05556 798 aa9.98□□□□□ -0.81
VPS11-207ENST00000620429 FHP07954 510 aa9.98□□□□□ -0.81
VPS11-207ENST00000620429 OR56A5P0C7T3 313 aa9.98□□□□□ -0.81
VPS11-207ENST00000620429 LBPP18428 481 aa9.98□□□□□ -0.81
VPS11-207ENST00000620429 PAMP19021 973 aa9.98□□□□□ -0.81
VPS11-207ENST00000620429 RPS19P39019 145 aaKnown RBP9.98□□□□□ -0.81
VPS11-207ENST00000620429 SLC19A1P41440 591 aa9.98□□□□□ -0.81
VPS11-207ENST00000620429 ZNF81P51508 661 aa9.98□□□□□ -0.81
VPS11-207ENST00000620429 RABGGTBP53611 331 aa9.98□□□□□ -0.81
VPS11-207ENST00000620429 SOX4Q06945 474 aaPredicted RBP9.98□□□□□ -0.81
VPS11-207ENST00000620429 PPP1R8Q12972 351 aaKnown RBP9.98□□□□□ -0.81
VPS11-207ENST00000620429 FCN2Q15485 313 aa9.98□□□□□ -0.81
VPS11-207ENST00000620429 TAF1CQ15572 869 aaPredicted RBP9.98□□□□□ -0.81
VPS11-207ENST00000620429 ZBTB6Q15916 424 aa9.98□□□□□ -0.81
VPS11-207ENST00000620429 INTS6LQ5JSJ4 861 aaKnown RBP9.98□□□□□ -0.81
VPS11-207ENST00000620429 FBXO47Q5MNV8 452 aa9.98□□□□□ -0.81
VPS11-207ENST00000620429 BICRALQ6AI39 1079 aa9.98□□□□□ -0.81
VPS11-207ENST00000620429 ATRAIDQ6UW56 229 aa9.98□□□□□ -0.81
VPS11-207ENST00000620429 ZNF367Q7RTV3 350 aa9.98□□□□□ -0.81
VPS11-207ENST00000620429 GLCCI1Q86VQ1 547 aa9.98□□□□□ -0.81
VPS11-207ENST00000620429 TBC1D19Q8N5T2 526 aa9.98□□□□□ -0.81
VPS11-207ENST00000620429 DPP10Q8N608 796 aa9.98□□□□□ -0.81
VPS11-207ENST00000620429 OR1M1Q8NGA1 313 aa9.98□□□□□ -0.81
VPS11-207ENST00000620429 TMEM175Q9BSA9 504 aa9.98□□□□□ -0.81
VPS11-207ENST00000620429 DUSP16Q9BY84 665 aa9.98□□□□□ -0.81
VPS11-207ENST00000620429 DNAJC11Q9NVH1 559 aa9.98□□□□□ -0.81
VPS11-207ENST00000620429 DDIT4Q9NX09 232 aa9.98□□□□□ -0.81
VPS11-207ENST00000620429 SLAMF8Q9P0V8 285 aa9.98□□□□□ -0.81
VPS11-207ENST00000620429 CBX7O95931 251 aa9.98□□□□□ -0.81
VPS11-207ENST00000620429 ZNF865P0CJ78 1059 aaPredicted RBP9.98□□□□□ -0.81
VPS11-207ENST00000620429 ANXA3P12429 323 aa9.98□□□□□ -0.81
VPS11-207ENST00000620429 CYP4B1P13584 511 aa9.98□□□□□ -0.81
VPS11-207ENST00000620429 ZNF37AP17032 561 aaPredicted RBP9.98□□□□□ -0.81
VPS11-207ENST00000620429 MAPK1P28482 360 aa9.98□□□□□ -0.81
VPS11-207ENST00000620429 DAPP51397 102 aa9.98□□□□□ -0.81
VPS11-207ENST00000620429 HFEQ30201 348 aa9.98□□□□□ -0.81
VPS11-207ENST00000620429 DCAF4L1Q3SXM0 396 aa9.98□□□□□ -0.81
VPS11-207ENST00000620429 KIAA1614Q5VZ46 1190 aa9.98□□□□□ -0.81
VPS11-207ENST00000620429 PYHIN1Q6K0P9 492 aa9.98□□□□□ -0.81
VPS11-207ENST00000620429 RAB11FIP2Q7L804 512 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms