RNA–Protein interactions for RNA: ENST00000616236.1

RFC3-203, Transcript of replication factor C subunit 3, humanhuman

TSL 3

Gene RFC3, Length 612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-203ENST00000616236 COQ8BQ96D53 544 aa4.63□□□□□ -1.67
RFC3-203ENST00000616236 RAB39BQ96DA2 213 aa4.63□□□□□ -1.67
RFC3-203ENST00000616236 SCMH1Q96GD3 660 aa4.63□□□□□ -1.67
RFC3-203ENST00000616236 C4orf36Q96KX1 117 aa4.63□□□□□ -1.67
RFC3-203ENST00000616236 MARK4Q96L34 752 aa4.63□□□□□ -1.67
RFC3-203ENST00000616236 CXorf58Q96LI9 332 aa4.63□□□□□ -1.67
RFC3-203ENST00000616236 SECISBP2Q96T21 854 aaKnown RBP4.63□□□□□ -1.67
RFC3-203ENST00000616236 ZBTB18Q99592 522 aa4.63□□□□□ -1.67
RFC3-203ENST00000616236 RTP3Q9BQQ7 232 aa4.63□□□□□ -1.67
RFC3-203ENST00000616236 GANQ9H2C0 597 aa4.63□□□□□ -1.67
RFC3-203ENST00000616236 VCX2Q9H322 139 aa4.63□□□□□ -1.67
RFC3-203ENST00000616236 DPEP2Q9H4A9 486 aa4.63□□□□□ -1.67
RFC3-203ENST00000616236 MARCH7Q9H992 704 aa4.63□□□□□ -1.67
RFC3-203ENST00000616236 HPS4Q9NQG7 708 aa4.63□□□□□ -1.67
RFC3-203ENST00000616236 SLC38A7Q9NVC3 462 aa4.63□□□□□ -1.67
RFC3-203ENST00000616236 ZDHHC2Q9UIJ5 367 aa4.63□□□□□ -1.67
RFC3-203ENST00000616236 SIX4Q9UIU6 781 aa4.63□□□□□ -1.67
RFC3-203ENST00000616236 HS3ST3B1Q9Y662 390 aa4.63□□□□□ -1.67
RFC3-203ENST00000616236 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.63□□□□□ -1.67
RFC3-203ENST00000616236 IGLV5-39A0A0G2JS06 123 aa4.62□□□□□ -1.67
RFC3-203ENST00000616236 C4orf47A7E2U8 309 aa4.62□□□□□ -1.67
RFC3-203ENST00000616236 LGALS8O00214 317 aa4.62□□□□□ -1.67
RFC3-203ENST00000616236 SURF6O75683 361 aaKnown RBP4.62□□□□□ -1.67
RFC3-203ENST00000616236 OR4F21O95013 312 aa4.62□□□□□ -1.67
RFC3-203ENST00000616236 MFN2O95140 757 aa4.62□□□□□ -1.67
RFC3-203ENST00000616236 SYF2O95926 243 aaKnown RBP4.62□□□□□ -1.67
RFC3-203ENST00000616236 SERPINF2P08697 491 aa4.62□□□□□ -1.67
RFC3-203ENST00000616236 LINC00271P0C7V0 271 aa4.62□□□□□ -1.67
RFC3-203ENST00000616236 TNFRSF1BP20333 461 aa4.62□□□□□ -1.67
RFC3-203ENST00000616236 CCNCP24863 283 aa4.62□□□□□ -1.67
RFC3-203ENST00000616236 PTPN6P29350 595 aa4.62□□□□□ -1.67
RFC3-203ENST00000616236 HOXD3P31249 432 aaPredicted RBP4.62□□□□□ -1.67
RFC3-203ENST00000616236 CSTF2P33240 577 aaKnown RBP eCLIP4.62□□□□□ -1.676e-9■□□□□ 10.5
RFC3-203ENST00000616236 CETN2P41208 172 aa4.62□□□□□ -1.67
RFC3-203ENST00000616236 ATP5OP48047 213 aa4.62□□□□□ -1.67
RFC3-203ENST00000616236 GEMP55040 296 aa4.62□□□□□ -1.67
RFC3-203ENST00000616236 MAZP56270 477 aaKnown RBP4.62□□□□□ -1.67
RFC3-203ENST00000616236 CLDN17P56750 224 aa4.62□□□□□ -1.67
RFC3-203ENST00000616236 BNC1Q01954 994 aa4.62□□□□□ -1.67
RFC3-203ENST00000616236 TNFRSF17Q02223 184 aa4.62□□□□□ -1.67
RFC3-203ENST00000616236 SP3Q02447 781 aa4.62□□□□□ -1.67
RFC3-203ENST00000616236 KEAP1Q14145 624 aa4.62□□□□□ -1.67
RFC3-203ENST00000616236 BTG3Q14201 252 aaPredicted RBP4.62□□□□□ -1.67
RFC3-203ENST00000616236 SPHARQ15513 63 aa4.62□□□□□ -1.67
RFC3-203ENST00000616236 ANKRD55Q3KP44 614 aa4.62□□□□□ -1.67
RFC3-203ENST00000616236 GPAT3Q53EU6 434 aa4.62□□□□□ -1.67
RFC3-203ENST00000616236 ASPRV1Q53RT3 343 aa4.62□□□□□ -1.67
RFC3-203ENST00000616236 EFHC1Q5JVL4 640 aa4.62□□□□□ -1.67
RFC3-203ENST00000616236 LIPKQ5VXJ0 399 aa4.62□□□□□ -1.67
RFC3-203ENST00000616236 PMF1Q6P1K2 205 aa4.62□□□□□ -1.67
RFC3-203ENST00000616236 PTF1AQ7RTS3 328 aa4.62□□□□□ -1.67
RFC3-203ENST00000616236 LRRC70Q7Z2Q7 622 aa4.62□□□□□ -1.67
RFC3-203ENST00000616236 COX8CQ7Z4L0 72 aa4.62□□□□□ -1.67
RFC3-203ENST00000616236 C5orf24Q7Z6I8 188 aa4.62□□□□□ -1.67
RFC3-203ENST00000616236 ZNF554Q86TJ5 538 aa4.62□□□□□ -1.67
RFC3-203ENST00000616236 YRDCQ86U90 279 aaKnown RBP4.62□□□□□ -1.67
RFC3-203ENST00000616236 CCDC60Q8IWA6 550 aaPredicted RBP4.62□□□□□ -1.67
RFC3-203ENST00000616236 ADHFE1Q8IWW8 467 aa4.62□□□□□ -1.67
RFC3-203ENST00000616236 DCP1BQ8IZD4 617 aaKnown RBP4.62□□□□□ -1.67
RFC3-203ENST00000616236 GCNT2Q8N0V5 402 aa4.62□□□□□ -1.67
RFC3-203ENST00000616236 ZNF444Q8N0Y2 327 aaPredicted RBP4.62□□□□□ -1.67
RFC3-203ENST00000616236 ARFGAP1Q8N6T3 406 aa4.62□□□□□ -1.67
RFC3-203ENST00000616236 GBP7Q8N8V2 638 aaPredicted RBP4.62□□□□□ -1.67
RFC3-203ENST00000616236 RNF149Q8NC42 400 aa4.62□□□□□ -1.67
RFC3-203ENST00000616236 OR1J1Q8NGS3 322 aa4.62□□□□□ -1.67
RFC3-203ENST00000616236 OR4L1Q8NH43 312 aa4.62□□□□□ -1.67
RFC3-203ENST00000616236 MCHR2Q969V1 340 aa4.62□□□□□ -1.67
RFC3-203ENST00000616236 NCLNQ969V3 563 aa4.62□□□□□ -1.67
RFC3-203ENST00000616236 ABHD8Q96I13 439 aa4.62□□□□□ -1.67
RFC3-203ENST00000616236 UBAC1Q9BSL1 405 aa4.62□□□□□ -1.67
RFC3-203ENST00000616236 ZNF747Q9BV97 191 aa4.62□□□□□ -1.67
RFC3-203ENST00000616236 MRPL13Q9BYD1 178 aaKnown RBP4.62□□□□□ -1.67
RFC3-203ENST00000616236 SEMA4CQ9C0C4 833 aa4.62□□□□□ -1.67
RFC3-203ENST00000616236 SPRTNQ9H040 489 aaPredicted RBP4.62□□□□□ -1.67
RFC3-203ENST00000616236 CSTL1Q9H114 145 aa4.62□□□□□ -1.67
RFC3-203ENST00000616236 WDR76Q9H967 626 aa4.62□□□□□ -1.67
RFC3-203ENST00000616236 UPF2Q9HAU5 1272 aaKnown RBP4.62□□□□□ -1.67
RFC3-203ENST00000616236 FAM207AQ9NSI2 230 aaPredicted RBP4.62□□□□□ -1.67
RFC3-203ENST00000616236 ZNF224Q9NZL3 707 aa4.62□□□□□ -1.67
RFC3-203ENST00000616236 TEKT2Q9UIF3 430 aa4.62□□□□□ -1.67
RFC3-203ENST00000616236 DLGAP4Q9Y2H0 992 aa4.62□□□□□ -1.67
RFC3-203ENST00000616236 TMED5Q9Y3A6 229 aa4.62□□□□□ -1.67
RFC3-203ENST00000616236 ARID2Q68CP9 1835 aa4.61□□□□□ -1.67
RFC3-203ENST00000616236 OR6C75A6NL08 312 aa4.61□□□□□ -1.67
RFC3-203ENST00000616236 C1QTNF3-AMACRE9PGA6 284 aa4.61□□□□□ -1.67
RFC3-203ENST00000616236 PDXKO00764 312 aa4.61□□□□□ -1.67
RFC3-203ENST00000616236 CHEK1O14757 476 aa4.61□□□□□ -1.67
RFC3-203ENST00000616236 TNFRSF13BO14836 293 aaPredicted RBP4.61□□□□□ -1.67
RFC3-203ENST00000616236 KIF5CO60282 957 aa4.61□□□□□ -1.67
RFC3-203ENST00000616236 MBD3O95983 291 aa4.61□□□□□ -1.67
RFC3-203ENST00000616236 UGT2B4P06133 528 aa4.61□□□□□ -1.67
RFC3-203ENST00000616236 GSTA2P09210 222 aa4.61□□□□□ -1.67
RFC3-203ENST00000616236 ANPEPP15144 967 aa4.61□□□□□ -1.67
RFC3-203ENST00000616236 LHCGRP22888 699 aa4.61□□□□□ -1.67
RFC3-203ENST00000616236 FCARP24071 287 aa4.61□□□□□ -1.67
RFC3-203ENST00000616236 DLSTP36957 453 aa4.61□□□□□ -1.67
RFC3-203ENST00000616236 SLC1A3P43003 542 aa4.61□□□□□ -1.67
RFC3-203ENST00000616236 RFX2P48378 723 aa4.61□□□□□ -1.67
RFC3-203ENST00000616236 SLC1A6P48664 564 aa4.61□□□□□ -1.67
RFC3-203ENST00000616236 PITX1P78337 314 aaPredicted RBP4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms