RNA–Protein interactions for RNA: ENST00000613121.1

IGHV3-41-201, Transcript of immunoglobulin heavy variable 3-41 (pseudogene), humanhuman

BASIC

Gene IGHV3-41, Length 348 nt, Biotype IG V pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-41-201ENST00000613121 GOLGA8RI6L899 631 aa17.06■□□□□ 0.32
IGHV3-41-201ENST00000613121 DPM1O60762 260 aa17.06■□□□□ 0.32
IGHV3-41-201ENST00000613121 B4GALT2O60909 372 aa17.06■□□□□ 0.32
IGHV3-41-201ENST00000613121 SIX3O95343 332 aaPredicted RBP17.06■□□□□ 0.32
IGHV3-41-201ENST00000613121 UQCRHP07919 91 aa17.06■□□□□ 0.32
IGHV3-41-201ENST00000613121 CD22P20273 847 aa17.06■□□□□ 0.32
IGHV3-41-201ENST00000613121 JAK1P23458 1154 aa17.06■□□□□ 0.32
IGHV3-41-201ENST00000613121 EEF1DP29692 281 aaKnown RBP17.06■□□□□ 0.32
IGHV3-41-201ENST00000613121 SLCO1A2P46721 670 aa17.06■□□□□ 0.32
IGHV3-41-201ENST00000613121 PIK3CGP48736 1102 aa17.06■□□□□ 0.32
IGHV3-41-201ENST00000613121 SOX8P57073 446 aa17.06■□□□□ 0.32
IGHV3-41-201ENST00000613121 ACTN3Q08043 901 aaPredicted RBP17.06■□□□□ 0.32
IGHV3-41-201ENST00000613121 TRIM40Q6P9F5 258 aa17.06■□□□□ 0.32
IGHV3-41-201ENST00000613121 GOLGA7Q7Z5G4 137 aa17.06■□□□□ 0.32
IGHV3-41-201ENST00000613121 SHISA5Q8N114 240 aa17.06■□□□□ 0.32
IGHV3-41-201ENST00000613121 GAL3ST3Q96A11 431 aa17.06■□□□□ 0.32
IGHV3-41-201ENST00000613121 MS4A6EQ96DS6 147 aa17.06■□□□□ 0.32
IGHV3-41-201ENST00000613121 OR1F2PQ96R84 312 aa17.06■□□□□ 0.32
IGHV3-41-201ENST00000613121 LHPPQ9H008 270 aa17.06■□□□□ 0.32
IGHV3-41-201ENST00000613121 COPS7BQ9H9Q2 264 aaPredicted RBP17.06■□□□□ 0.32
IGHV3-41-201ENST00000613121 SH3BGRLO75368 114 aa17.05■□□□□ 0.32
IGHV3-41-201ENST00000613121 SHBGP04278 402 aa17.05■□□□□ 0.32
IGHV3-41-201ENST00000613121 FHP07954 510 aa17.05■□□□□ 0.32
IGHV3-41-201ENST00000613121 TAC1P20366 129 aa17.05■□□□□ 0.32
IGHV3-41-201ENST00000613121 HNRNPH1P31943 449 aaKnown RBP17.05■□□□□ 0.32
IGHV3-41-201ENST00000613121 VSNL1P62760 191 aa17.05■□□□□ 0.32
IGHV3-41-201ENST00000613121 DDX39BQ13838 428 aaKnown RBP17.05■□□□□ 0.32
IGHV3-41-201ENST00000613121 NSDHLQ15738 373 aa17.05■□□□□ 0.32
IGHV3-41-201ENST00000613121 VWA5B1Q5TIE3 1220 aa17.05■□□□□ 0.32
IGHV3-41-201ENST00000613121 LIPJQ5W064 366 aa17.05■□□□□ 0.32
IGHV3-41-201ENST00000613121 TMEM205Q6UW68 189 aa17.05■□□□□ 0.32
IGHV3-41-201ENST00000613121 CHSY3Q70JA7 882 aa17.05■□□□□ 0.32
IGHV3-41-201ENST00000613121 KBTBD2Q8IY47 623 aa17.05■□□□□ 0.32
IGHV3-41-201ENST00000613121 TM9SF4Q92544 642 aa17.05■□□□□ 0.32
IGHV3-41-201ENST00000613121 F2RL3Q96RI0 385 aa17.05■□□□□ 0.32
IGHV3-41-201ENST00000613121 SMAD5Q99717 465 aaKnown RBP17.05■□□□□ 0.32
IGHV3-41-201ENST00000613121 MFRPQ9BY79 579 aa17.05■□□□□ 0.32
IGHV3-41-201ENST00000613121 ZNF552Q9H707 407 aaPredicted RBP17.05■□□□□ 0.32
IGHV3-41-201ENST00000613121 NOL11Q9H8H0 719 aaKnown RBP17.05■□□□□ 0.32
IGHV3-41-201ENST00000613121 RIC8BQ9NVN3 520 aa17.05■□□□□ 0.32
IGHV3-41-201ENST00000613121 C5AR2Q9P296 337 aa17.05■□□□□ 0.32
IGHV3-41-201ENST00000613121 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.05■□□□□ 0.32
IGHV3-41-201ENST00000613121 V9GYY5 206 aaPredicted RBP17.05■□□□□ 0.32
IGHV3-41-201ENST00000613121 SNRNP200O75643 2136 aaKnown RBP17.05■□□□□ 0.32
IGHV3-41-201ENST00000613121 IGHV1-45A0A0A0MS14 117 aa17.04■□□□□ 0.32
IGHV3-41-201ENST00000613121 IGHV3-20A0A0C4DH32 117 aa17.04■□□□□ 0.32
IGHV3-41-201ENST00000613121 STX16-NPEPL1H3BU86 382 aa17.04■□□□□ 0.32
IGHV3-41-201ENST00000613121 STX16O14662 325 aa17.04■□□□□ 0.32
IGHV3-41-201ENST00000613121 B3GALT2O43825 422 aa17.04■□□□□ 0.32
IGHV3-41-201ENST00000613121 TGFB1P01137 390 aa17.04■□□□□ 0.32
IGHV3-41-201ENST00000613121 PYGBP11216 843 aa17.04■□□□□ 0.32
IGHV3-41-201ENST00000613121 COX6A1P12074 109 aa17.04■□□□□ 0.32
IGHV3-41-201ENST00000613121 ICAM2P13598 275 aa17.04■□□□□ 0.32
IGHV3-41-201ENST00000613121 KRT15P19012 456 aa17.04■□□□□ 0.32
IGHV3-41-201ENST00000613121 PHEXP78562 749 aa17.04■□□□□ 0.32
IGHV3-41-201ENST00000613121 AGAP7PQ5VUJ5 663 aa17.04■□□□□ 0.32
IGHV3-41-201ENST00000613121 ADNP2Q6IQ32 1131 aa17.04■□□□□ 0.32
IGHV3-41-201ENST00000613121 GRHL2Q6ISB3 625 aa17.04■□□□□ 0.32
IGHV3-41-201ENST00000613121 METTL2BQ6P1Q9 378 aaKnown RBP17.04■□□□□ 0.32
IGHV3-41-201ENST00000613121 VN1R5Q7Z5H4 357 aa17.04■□□□□ 0.32
IGHV3-41-201ENST00000613121 CPEB2Q7Z5Q1 589 aaKnown RBP17.04■□□□□ 0.32
IGHV3-41-201ENST00000613121 HPS6Q86YV9 775 aa17.04■□□□□ 0.32
IGHV3-41-201ENST00000613121 LAS2Q8IYD9 372 aa17.04■□□□□ 0.32
IGHV3-41-201ENST00000613121 CA13Q8N1Q1 262 aa17.04■□□□□ 0.32
IGHV3-41-201ENST00000613121 PLPP5Q8NEB5 264 aa17.04■□□□□ 0.32
IGHV3-41-201ENST00000613121 SRFBP1Q8NEF9 429 aaKnown RBP17.04■□□□□ 0.32
IGHV3-41-201ENST00000613121 OR2L5Q8NG80 312 aa17.04■□□□□ 0.32
IGHV3-41-201ENST00000613121 OR7G3Q8NG95 312 aa17.04■□□□□ 0.32
IGHV3-41-201ENST00000613121 ACMSDQ8TDX5 336 aa17.04■□□□□ 0.32
IGHV3-41-201ENST00000613121 REPS1Q96D71 796 aa17.04■□□□□ 0.32
IGHV3-41-201ENST00000613121 PTCHD1Q96NR3 888 aa17.04■□□□□ 0.32
IGHV3-41-201ENST00000613121 AGAP4Q96P64 663 aa17.04■□□□□ 0.32
IGHV3-41-201ENST00000613121 PPCSQ9HAB8 311 aa17.04■□□□□ 0.32
IGHV3-41-201ENST00000613121 TMEM216Q9P0N5 145 aa17.04■□□□□ 0.32
IGHV3-41-201ENST00000613121 DCDC2Q9UHG0 476 aa17.04■□□□□ 0.32
IGHV3-41-201ENST00000613121 ADGRE2Q9UHX3 823 aa17.04■□□□□ 0.32
IGHV3-41-201ENST00000613121 PCDHGA11Q9Y5H2 935 aa17.04■□□□□ 0.32
IGHV3-41-201ENST00000613121 PCM1Q15154 2024 aa17.04■□□□□ 0.32
IGHV3-41-201ENST00000613121 LOC102723996A0A087X1L8 192 aa17.03■□□□□ 0.32
IGHV3-41-201ENST00000613121 A0A1W2PPM1 405 aa17.03■□□□□ 0.32
IGHV3-41-201ENST00000613121 TLDC2A0PJX2 215 aa17.03■□□□□ 0.32
IGHV3-41-201ENST00000613121 FAM227AF5H4B4 570 aa17.03■□□□□ 0.32
IGHV3-41-201ENST00000613121 E2F3O00716 465 aa17.03■□□□□ 0.32
IGHV3-41-201ENST00000613121 PRMT3O60678 531 aa17.03■□□□□ 0.32
IGHV3-41-201ENST00000613121 CLDN9O95484 217 aa17.03■□□□□ 0.32
IGHV3-41-201ENST00000613121 CYC1P08574 325 aa17.03■□□□□ 0.32
IGHV3-41-201ENST00000613121 RNH1P13489 461 aaKnown RBP17.03■□□□□ 0.32
IGHV3-41-201ENST00000613121 PLA2G2AP14555 144 aa17.03■□□□□ 0.32
IGHV3-41-201ENST00000613121 SERPINB1P30740 379 aa17.03■□□□□ 0.32
IGHV3-41-201ENST00000613121 HSD17B3P37058 310 aa17.03■□□□□ 0.32
IGHV3-41-201ENST00000613121 CCNG1P51959 295 aa17.03■□□□□ 0.32
IGHV3-41-201ENST00000613121 PCDH1Q08174 1060 aa17.03■□□□□ 0.32
IGHV3-41-201ENST00000613121 RUNX2Q13950 521 aa17.03■□□□□ 0.32
IGHV3-41-201ENST00000613121 ABRAXAS2Q15018 415 aa17.03■□□□□ 0.32
IGHV3-41-201ENST00000613121 CPSF6Q16630 551 aaKnown RBP eCLIP17.03■□□□□ 0.32
IGHV3-41-201ENST00000613121 NADK2Q4G0N4 442 aa17.03■□□□□ 0.32
IGHV3-41-201ENST00000613121 LANCL3Q6ZV70 420 aa17.03■□□□□ 0.32
IGHV3-41-201ENST00000613121 ANKRD37Q7Z713 158 aa17.03■□□□□ 0.32
IGHV3-41-201ENST00000613121 LCA5Q86VQ0 697 aa17.03■□□□□ 0.32
IGHV3-41-201ENST00000613121 ZADH2Q8N4Q0 377 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms