RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 hCG_1807616A0A1W2PRN6 198 aa8.5□□□□□ -1.05
TTC28-208ENST00000612946 GGT3PA6NGU5 568 aa8.5□□□□□ -1.05
TTC28-208ENST00000612946 CD34P28906 385 aa8.5□□□□□ -1.05
TTC28-208ENST00000612946 GGT2P36268 569 aa8.5□□□□□ -1.05
TTC28-208ENST00000612946 BCL2L15Q5TBC7 163 aa8.5□□□□□ -1.05
TTC28-208ENST00000612946 C7orf61Q8IZ16 206 aa8.5□□□□□ -1.05
TTC28-208ENST00000612946 WDR48Q8TAF3 677 aa8.5□□□□□ -1.05
TTC28-208ENST00000612946 TM9SF4Q92544 642 aa8.5□□□□□ -1.05
TTC28-208ENST00000612946 RBPMSQ93062 196 aaKnown RBP8.5□□□□□ -1.05
TTC28-208ENST00000612946 OR10A4Q9H209 315 aa8.5□□□□□ -1.05
TTC28-208ENST00000612946 TVP23BQ9NYZ1 205 aa8.5□□□□□ -1.05
TTC28-208ENST00000612946 PCDHB5Q9Y5E4 795 aa8.5□□□□□ -1.05
TTC28-208ENST00000612946 ZNF638Q14966 1978 aaKnown RBP8.5□□□□□ -1.05
TTC28-208ENST00000612946 A0A096LPI6 279 aa8.5□□□□□ -1.05
TTC28-208ENST00000612946 GATCO43716 136 aaKnown RBP8.5□□□□□ -1.05
TTC28-208ENST00000612946 PDX1P52945 283 aa8.5□□□□□ -1.05
TTC28-208ENST00000612946 NPRL3Q12980 569 aa8.5□□□□□ -1.05
TTC28-208ENST00000612946 CTBP1Q13363 440 aa8.5□□□□□ -1.05
TTC28-208ENST00000612946 MEP1AQ16819 746 aa8.5□□□□□ -1.05
TTC28-208ENST00000612946 CYS1Q717R9 158 aa8.5□□□□□ -1.05
TTC28-208ENST00000612946 ZNF676Q8N7Q3 588 aa8.5□□□□□ -1.05
TTC28-208ENST00000612946 CSPG4P5Q96PW8 444 aa8.5□□□□□ -1.05
TTC28-208ENST00000612946 MGLLQ99685 303 aa8.5□□□□□ -1.05
TTC28-208ENST00000612946 SLC15A5A6NIM6 579 aa8.5□□□□□ -1.05
TTC28-208ENST00000612946 SLC43A1O75387 559 aa8.5□□□□□ -1.05
TTC28-208ENST00000612946 RHCEP18577 417 aa8.5□□□□□ -1.05
TTC28-208ENST00000612946 CHAF1BQ13112 559 aa8.5□□□□□ -1.05
TTC28-208ENST00000612946 GRIN2CQ14957 1233 aa8.5□□□□□ -1.05
TTC28-208ENST00000612946 MED27Q6P2C8 311 aa8.5□□□□□ -1.05
TTC28-208ENST00000612946 ENPP7Q6UWV6 458 aa8.5□□□□□ -1.05
TTC28-208ENST00000612946 SUMF2Q8NBJ7 301 aa8.5□□□□□ -1.05
TTC28-208ENST00000612946 GPR156Q8NFN8 814 aa8.5□□□□□ -1.05
TTC28-208ENST00000612946 FCRL3Q96P31 734 aaPredicted RBP8.5□□□□□ -1.05
TTC28-208ENST00000612946 SPIN2AQ99865 258 aa8.5□□□□□ -1.05
TTC28-208ENST00000612946 CTRCQ99895 268 aa8.5□□□□□ -1.05
TTC28-208ENST00000612946 SPIN2BQ9BPZ2 258 aa8.5□□□□□ -1.05
TTC28-208ENST00000612946 WDR26Q9H7D7 661 aa8.5□□□□□ -1.05
TTC28-208ENST00000612946 POLE4Q9NR33 117 aa8.5□□□□□ -1.05
TTC28-208ENST00000612946 HRH3Q9Y5N1 445 aa8.5□□□□□ -1.05
TTC28-208ENST00000612946 TMEM14AQ9Y6G1 99 aa8.5□□□□□ -1.05
TTC28-208ENST00000612946 SLITRK3O94933 977 aa8.5□□□□□ -1.05
TTC28-208ENST00000612946 IGFALSP35858 605 aa8.5□□□□□ -1.05
TTC28-208ENST00000612946 EPHB3P54753 998 aa8.5□□□□□ -1.05
TTC28-208ENST00000612946 RPL7AP62424 266 aaKnown RBP8.5□□□□□ -1.05
TTC28-208ENST00000612946 ZNF616Q08AN1 781 aa8.5□□□□□ -1.05
TTC28-208ENST00000612946 DPY19L2P1Q6NXN4 242 aa8.5□□□□□ -1.05
TTC28-208ENST00000612946 PYROXD2Q8N2H3 581 aa8.5□□□□□ -1.05
TTC28-208ENST00000612946 TNKS2Q9H2K2 1166 aa8.5□□□□□ -1.05
TTC28-208ENST00000612946 CABIN1Q9Y6J0 2220 aa8.5□□□□□ -1.05
TTC28-208ENST00000612946 TREHO43280 583 aa8.5□□□□□ -1.05
TTC28-208ENST00000612946 PKMP14618 531 aaKnown RBP8.5□□□□□ -1.05
TTC28-208ENST00000612946 ATXN1P54253 815 aaKnown RBP8.5□□□□□ -1.05
TTC28-208ENST00000612946 USP41Q3LFD5 358 aa8.5□□□□□ -1.05
TTC28-208ENST00000612946 TMEM41BQ5BJD5 291 aa8.5□□□□□ -1.05
TTC28-208ENST00000612946 ALG10BQ5I7T1 473 aa8.5□□□□□ -1.05
TTC28-208ENST00000612946 TMEM236Q5W0B7 351 aa8.5□□□□□ -1.05
TTC28-208ENST00000612946 LCLAT1Q6UWP7 414 aa8.5□□□□□ -1.05
TTC28-208ENST00000612946 TFAP2DQ7Z6R9 452 aa8.5□□□□□ -1.05
TTC28-208ENST00000612946 GPR22Q99680 433 aa8.5□□□□□ -1.05
TTC28-208ENST00000612946 MFSD1Q9H3U5 465 aa8.5□□□□□ -1.05
TTC28-208ENST00000612946 FAM186AA6NE01 2351 aa8.5□□□□□ -1.05
TTC28-208ENST00000612946 CDHR4A6H8M9 788 aa8.5□□□□□ -1.05
TTC28-208ENST00000612946 GOT1P17174 413 aa8.5□□□□□ -1.05
TTC28-208ENST00000612946 CXCR3P49682 368 aa8.5□□□□□ -1.05
TTC28-208ENST00000612946 BTG1P62324 171 aa8.5□□□□□ -1.05
TTC28-208ENST00000612946 CDK3Q00526 305 aa8.5□□□□□ -1.05
TTC28-208ENST00000612946 HSPA14Q0VDF9 509 aa8.5□□□□□ -1.05
TTC28-208ENST00000612946 PGM5Q15124 567 aa8.5□□□□□ -1.05
TTC28-208ENST00000612946 SLC27A1Q6PCB7 646 aa8.5□□□□□ -1.05
TTC28-208ENST00000612946 AARSD1Q9BTE6 412 aaKnown RBP8.5□□□□□ -1.05
TTC28-208ENST00000612946 TNFSF13BQ9Y275 285 aa8.5□□□□□ -1.05
TTC28-208ENST00000612946 ASF1AQ9Y294 204 aa8.5□□□□□ -1.05
TTC28-208ENST00000612946 SCN2AQ99250 2005 aa8.5□□□□□ -1.05
TTC28-208ENST00000612946 C22orf31O95567 290 aa8.5□□□□□ -1.05
TTC28-208ENST00000612946 HTR1AP08908 422 aa8.5□□□□□ -1.05
TTC28-208ENST00000612946 ART1P52961 327 aa8.5□□□□□ -1.05
TTC28-208ENST00000612946 CYBRD1Q53TN4 286 aa8.5□□□□□ -1.05
TTC28-208ENST00000612946 METTL7BQ6UX53 244 aa8.5□□□□□ -1.05
TTC28-208ENST00000612946 LRFN1Q9P244 771 aa8.5□□□□□ -1.05
TTC28-208ENST00000612946 MAP4K5Q9Y4K4 846 aa8.5□□□□□ -1.05
TTC28-208ENST00000612946 SLC12A8A0AV02 714 aa8.5□□□□□ -1.05
TTC28-208ENST00000612946 ARL5CA6NH57 179 aa8.5□□□□□ -1.05
TTC28-208ENST00000612946 INHAP05111 366 aa8.5□□□□□ -1.05
TTC28-208ENST00000612946 HERV-K104P61576 105 aa8.5□□□□□ -1.05
TTC28-208ENST00000612946 UAP1L1Q3KQV9 507 aa8.5□□□□□ -1.05
TTC28-208ENST00000612946 NUP54Q7Z3B4 507 aa8.5□□□□□ -1.05
TTC28-208ENST00000612946 C1orf52Q8N6N3 182 aaKnown RBP8.5□□□□□ -1.05
TTC28-208ENST00000612946 NAT8LQ8N9F0 302 aa8.5□□□□□ -1.05
TTC28-208ENST00000612946 MYLIPQ8WY64 445 aa8.5□□□□□ -1.05
TTC28-208ENST00000612946 SMARCD2Q92925 531 aa8.5□□□□□ -1.05
TTC28-208ENST00000612946 B3GNT4Q9C0J1 378 aa8.5□□□□□ -1.05
TTC28-208ENST00000612946 MFFQ9GZY8 342 aa8.5□□□□□ -1.05
TTC28-208ENST00000612946 NTN4Q9HB63 628 aa8.5□□□□□ -1.05
TTC28-208ENST00000612946 LYRM2Q9NU23 88 aaPredicted RBP8.5□□□□□ -1.05
TTC28-208ENST00000612946 TXNL1O43396 289 aa8.5□□□□□ -1.05
TTC28-208ENST00000612946 DDX6P26196 483 aaKnown RBP eCLIP8.5□□□□□ -1.05
TTC28-208ENST00000612946 GRK6P43250 576 aa8.5□□□□□ -1.05
TTC28-208ENST00000612946 SP140Q13342 867 aa8.5□□□□□ -1.05
TTC28-208ENST00000612946 SPHARQ15513 63 aa8.5□□□□□ -1.05
TTC28-208ENST00000612946 SLC15A3Q8IY34 581 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms