RNA–Protein interactions for RNA: ENST00000612337.4

SSBP1-215, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSBP1, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-215ENST00000612337 ESRRAP11474 423 aaPredicted RBP16.66■□□□□ 0.26
SSBP1-215ENST00000612337 ZNF37AP17032 561 aaPredicted RBP16.66■□□□□ 0.26
SSBP1-215ENST00000612337 AGAP20933 346 aa16.66■□□□□ 0.26
SSBP1-215ENST00000612337 ADORA2A-AS1P86434 159 aa16.66■□□□□ 0.26
SSBP1-215ENST00000612337 FRG1Q14331 258 aaKnown RBP16.66■□□□□ 0.26
SSBP1-215ENST00000612337 HP1BP3Q5SSJ5 553 aaPredicted RBP16.66■□□□□ 0.26
SSBP1-215ENST00000612337 NXPE4Q6UWF7 544 aa16.66■□□□□ 0.26
SSBP1-215ENST00000612337 THOC6Q86W42 341 aaKnown RBP16.66■□□□□ 0.26
SSBP1-215ENST00000612337 SPPL2CQ8IUH8 684 aa16.66■□□□□ 0.26
SSBP1-215ENST00000612337 ANKRD7Q92527 254 aa16.66■□□□□ 0.26
SSBP1-215ENST00000612337 SMIM10Q96HG1 83 aa16.66■□□□□ 0.26
SSBP1-215ENST00000612337 PWWP2AQ96N64 755 aa16.66■□□□□ 0.26
SSBP1-215ENST00000612337 AIF1LQ9BQI0 150 aa16.66■□□□□ 0.26
SSBP1-215ENST00000612337 WDR83Q9BRX9 315 aaKnown RBP16.66■□□□□ 0.26
SSBP1-215ENST00000612337 TSPAN10Q9H1Z9 355 aaPredicted RBP16.66■□□□□ 0.26
SSBP1-215ENST00000612337 TRIM45Q9H8W5 580 aaPredicted RBP16.66■□□□□ 0.26
SSBP1-215ENST00000612337 TEX264Q9Y6I9 313 aa16.66■□□□□ 0.26
SSBP1-215ENST00000612337 TCRBV16S1A1N1A0A5B0 115 aa16.65■□□□□ 0.26
SSBP1-215ENST00000612337 CTAGE15A4D2H0 777 aa16.65■□□□□ 0.26
SSBP1-215ENST00000612337 SAGE2PA6NJ88 616 aa16.65■□□□□ 0.26
SSBP1-215ENST00000612337 NPIPA5E9PKD4 350 aa16.65■□□□□ 0.26
SSBP1-215ENST00000612337 SLC25A12O75746 678 aa16.65■□□□□ 0.26
SSBP1-215ENST00000612337 RNH1P13489 461 aaKnown RBP16.65■□□□□ 0.26
SSBP1-215ENST00000612337 TPP2P29144 1249 aaPredicted RBP16.65■□□□□ 0.26
SSBP1-215ENST00000612337 PTGER4P35408 488 aa16.65■□□□□ 0.26
SSBP1-215ENST00000612337 HNF4AP41235 474 aa16.65■□□□□ 0.26
SSBP1-215ENST00000612337 SMSP52788 366 aa16.65■□□□□ 0.26
SSBP1-215ENST00000612337 MLF1P58340 268 aa16.65■□□□□ 0.26
SSBP1-215ENST00000612337 RAB8AP61006 207 aa16.65■□□□□ 0.26
SSBP1-215ENST00000612337 BTG2P78543 158 aa16.65■□□□□ 0.26
SSBP1-215ENST00000612337 HYAL2Q12891 473 aa16.65■□□□□ 0.26
SSBP1-215ENST00000612337 ZNF468Q5VIY5 522 aaPredicted RBP16.65■□□□□ 0.26
SSBP1-215ENST00000612337 SYDE1Q6ZW31 735 aaPredicted RBP16.65■□□□□ 0.26
SSBP1-215ENST00000612337 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.65■□□□□ 0.26
SSBP1-215ENST00000612337 TMPRSS11BQ86T26 416 aa16.65■□□□□ 0.26
SSBP1-215ENST00000612337 CTAGE6Q86UF2 777 aa16.65■□□□□ 0.26
SSBP1-215ENST00000612337 CYP4X1Q8N118 509 aa16.65■□□□□ 0.26
SSBP1-215ENST00000612337 NKAPQ8N5F7 415 aaKnown RBP16.65■□□□□ 0.26
SSBP1-215ENST00000612337 ADAMTS18Q8TE60 1221 aa16.65■□□□□ 0.26
SSBP1-215ENST00000612337 PRDM9Q9NQV7 894 aa16.65■□□□□ 0.26
SSBP1-215ENST00000612337 NPIPA1Q9UND3 350 aa16.65■□□□□ 0.26
SSBP1-215ENST00000612337 SLC22A14Q9Y267 594 aa16.65■□□□□ 0.26
SSBP1-215ENST00000612337 KCNE2Q9Y6J6 123 aa16.65■□□□□ 0.26
SSBP1-215ENST00000612337 IGKV3D-11A0A0A0MRZ8 115 aa16.64■□□□□ 0.25
SSBP1-215ENST00000612337 PSMD12O00232 456 aaPredicted RBP16.64■□□□□ 0.25
SSBP1-215ENST00000612337 ASNA1O43681 348 aa16.64■□□□□ 0.25
SSBP1-215ENST00000612337 NME2P1O60361 137 aa16.64■□□□□ 0.25
SSBP1-215ENST00000612337 SERPINA6P08185 405 aa16.64■□□□□ 0.25
SSBP1-215ENST00000612337 TCP1P17987 556 aaKnown RBP16.64■□□□□ 0.25
SSBP1-215ENST00000612337 MAOAP21397 527 aa16.64■□□□□ 0.25
SSBP1-215ENST00000612337 NME2P22392 152 aa16.64■□□□□ 0.25
SSBP1-215ENST00000612337 ELAVL4P26378 380 aaKnown RBP16.64■□□□□ 0.25
SSBP1-215ENST00000612337 TRHRP34981 398 aaPredicted RBP16.64■□□□□ 0.25
SSBP1-215ENST00000612337 CYB561P49447 251 aa16.64■□□□□ 0.25
SSBP1-215ENST00000612337 CDKL1Q00532 357 aa16.64■□□□□ 0.25
SSBP1-215ENST00000612337 MAPKAPK3Q16644 382 aa16.64■□□□□ 0.25
SSBP1-215ENST00000612337 GDF7Q7Z4P5 450 aa16.64■□□□□ 0.25
SSBP1-215ENST00000612337 ARMC2Q8NEN0 867 aa16.64■□□□□ 0.25
SSBP1-215ENST00000612337 NFAM1Q8NET5 270 aaPredicted RBP16.64■□□□□ 0.25
SSBP1-215ENST00000612337 CREB3L4Q8TEY5 395 aa16.64■□□□□ 0.25
SSBP1-215ENST00000612337 TRIM51Q9BSJ1 452 aa16.64■□□□□ 0.25
SSBP1-215ENST00000612337 KLHL31Q9H511 634 aa16.64■□□□□ 0.25
SSBP1-215ENST00000612337 ZFATQ9P243 1243 aa16.64■□□□□ 0.25
SSBP1-215ENST00000612337 PSAT1Q9Y617 370 aa16.64■□□□□ 0.25
SSBP1-215ENST00000612337 CACNA1CQ13936 2221 aa16.64■□□□□ 0.25
SSBP1-215ENST00000612337 NPEPPSL1A6NEC2 478 aa16.63■□□□□ 0.25
SSBP1-215ENST00000612337 C4orf51C9J302 202 aa16.63■□□□□ 0.25
SSBP1-215ENST00000612337 CDC7O00311 574 aa16.63■□□□□ 0.25
SSBP1-215ENST00000612337 HNMTP50135 292 aa16.63■□□□□ 0.25
SSBP1-215ENST00000612337 ARL4CP56559 192 aa16.63■□□□□ 0.25
SSBP1-215ENST00000612337 MGAT5Q09328 741 aa16.63■□□□□ 0.25
SSBP1-215ENST00000612337 RBBP5Q15291 538 aaKnown RBP16.63■□□□□ 0.25
SSBP1-215ENST00000612337 ZC3HC1Q86WB0 502 aaKnown RBP16.63■□□□□ 0.25
SSBP1-215ENST00000612337 ZNF227Q86WZ6 799 aa16.63■□□□□ 0.25
SSBP1-215ENST00000612337 CA13Q8N1Q1 262 aa16.63■□□□□ 0.25
SSBP1-215ENST00000612337 ARMC10Q8N2F6 343 aa16.63■□□□□ 0.25
SSBP1-215ENST00000612337 GHDCQ8N2G8 530 aa16.63■□□□□ 0.25
SSBP1-215ENST00000612337 RUNDC3BQ96NL0 473 aa16.63■□□□□ 0.25
SSBP1-215ENST00000612337 AICDAQ9GZX7 198 aa16.63■□□□□ 0.25
SSBP1-215ENST00000612337 RHBGQ9H310 441 aa16.63■□□□□ 0.25
SSBP1-215ENST00000612337 NECTIN3Q9NQS3 549 aa16.63■□□□□ 0.25
SSBP1-215ENST00000612337 MEMO1Q9Y316 297 aa16.63■□□□□ 0.25
SSBP1-215ENST00000612337 MMACHCQ9Y4U1 282 aa16.63■□□□□ 0.25
SSBP1-215ENST00000612337 OARD1Q9Y530 152 aa16.63■□□□□ 0.25
SSBP1-215ENST00000612337 CELSR1Q9NYQ6 3014 aa16.63■□□□□ 0.25
SSBP1-215ENST00000612337 FAM95CA0A1B0GW59 222 aa16.62■□□□□ 0.25
SSBP1-215ENST00000612337 COX6B1P14854 86 aa16.62■□□□□ 0.25
SSBP1-215ENST00000612337 ZNF24P17028 368 aa16.62■□□□□ 0.25
SSBP1-215ENST00000612337 SAT1P21673 171 aa16.62■□□□□ 0.25
SSBP1-215ENST00000612337 HLCSP50747 726 aa16.62■□□□□ 0.25
SSBP1-215ENST00000612337 ITGA8P53708 1063 aa16.62■□□□□ 0.25
SSBP1-215ENST00000612337 STXBP1P61764 594 aaKnown RBP16.62■□□□□ 0.25
SSBP1-215ENST00000612337 DR1Q01658 176 aa16.62■□□□□ 0.25
SSBP1-215ENST00000612337 ZNF460Q14592 562 aa16.62■□□□□ 0.25
SSBP1-215ENST00000612337 TOR1AIP1Q5JTV8 583 aa16.62■□□□□ 0.25
SSBP1-215ENST00000612337 RNFT1Q5M7Z0 435 aa16.62■□□□□ 0.25
SSBP1-215ENST00000612337 CPSF7Q8N684 471 aaKnown RBP16.62■□□□□ 0.25
SSBP1-215ENST00000612337 TMEM125Q96AQ2 219 aa16.62■□□□□ 0.25
SSBP1-215ENST00000612337 EGFL8Q99944 293 aa16.62■□□□□ 0.25
SSBP1-215ENST00000612337 DEFB126Q9BYW3 111 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms