RNA–Protein interactions for RNA: ENST00000604187.1

PDLIM1P1-201, Transcript of PDZ and LIM domain 1 pseudogene 1, humanhuman

BASIC

Gene PDLIM1P1, Length 969 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P1-201ENST00000604187 CAVIN1Q6NZI2 390 aaKnown RBP10.95□□□□□ -0.66
PDLIM1P1-201ENST00000604187 RGS9BPQ6ZS82 235 aa10.95□□□□□ -0.66
PDLIM1P1-201ENST00000604187 SLC22A16Q86VW1 577 aa10.95□□□□□ -0.66
PDLIM1P1-201ENST00000604187 APCDD1LQ8NCL9 501 aa10.95□□□□□ -0.66
PDLIM1P1-201ENST00000604187 OR2M7Q8NG81 312 aa10.95□□□□□ -0.66
PDLIM1P1-201ENST00000604187 TM4SF19Q96DZ7 209 aa10.95□□□□□ -0.66
PDLIM1P1-201ENST00000604187 COX4I2Q96KJ9 171 aa10.95□□□□□ -0.66
PDLIM1P1-201ENST00000604187 CNPPD1Q9BV87 410 aa10.95□□□□□ -0.66
PDLIM1P1-201ENST00000604187 ETNK1Q9HBU6 452 aa10.95□□□□□ -0.66
PDLIM1P1-201ENST00000604187 CCDC177Q9NQR7 707 aaPredicted RBP10.95□□□□□ -0.66
PDLIM1P1-201ENST00000604187 B4GALT7Q9UBV7 327 aa10.95□□□□□ -0.66
PDLIM1P1-201ENST00000604187 ACAD8Q9UKU7 415 aa10.95□□□□□ -0.66
PDLIM1P1-201ENST00000604187 SH2B3Q9UQQ2 575 aa10.95□□□□□ -0.66
PDLIM1P1-201ENST00000604187 IGKV3D-11A0A0A0MRZ8 115 aa10.94□□□□□ -0.66
PDLIM1P1-201ENST00000604187 TCRBV16S1A1N1A0A5B0 115 aa10.94□□□□□ -0.66
PDLIM1P1-201ENST00000604187 A8MVJ9 347 aa10.94□□□□□ -0.66
PDLIM1P1-201ENST00000604187 NDUFS4O43181 175 aa10.94□□□□□ -0.66
PDLIM1P1-201ENST00000604187 GALR3O60755 368 aaPredicted RBP10.94□□□□□ -0.66
PDLIM1P1-201ENST00000604187 WDR1O75083 606 aa10.94□□□□□ -0.66
PDLIM1P1-201ENST00000604187 GLSO94925 669 aaPredicted RBP10.94□□□□□ -0.66
PDLIM1P1-201ENST00000604187 B3GALT4O96024 378 aa10.94□□□□□ -0.66
PDLIM1P1-201ENST00000604187 IGHG3P01860 377 aa10.94□□□□□ -0.66
PDLIM1P1-201ENST00000604187 ESR1P03372 595 aa10.94□□□□□ -0.66
PDLIM1P1-201ENST00000604187 CELA3AP09093 270 aa10.94□□□□□ -0.66
PDLIM1P1-201ENST00000604187 TACR1P25103 407 aa10.94□□□□□ -0.66
PDLIM1P1-201ENST00000604187 IMPA1P29218 277 aa10.94□□□□□ -0.66
PDLIM1P1-201ENST00000604187 CLCN2P51788 898 aa10.94□□□□□ -0.66
PDLIM1P1-201ENST00000604187 CRADDP78560 199 aa10.94□□□□□ -0.66
PDLIM1P1-201ENST00000604187 MEF2AQ02078 507 aaPredicted RBP10.94□□□□□ -0.66
PDLIM1P1-201ENST00000604187 DAZAP2Q15038 168 aaPredicted RBP10.94□□□□□ -0.66
PDLIM1P1-201ENST00000604187 RIPPLY2Q5TAB7 128 aa10.94□□□□□ -0.66
PDLIM1P1-201ENST00000604187 CAPN13Q6MZZ7 669 aaPredicted RBP10.94□□□□□ -0.66
PDLIM1P1-201ENST00000604187 C16orf47Q6ZP98 133 aaPredicted RBP10.94□□□□□ -0.66
PDLIM1P1-201ENST00000604187 QSOX2Q6ZRP7 698 aa10.94□□□□□ -0.66
PDLIM1P1-201ENST00000604187 TRILQ7L0X0 811 aa10.94□□□□□ -0.66
PDLIM1P1-201ENST00000604187 SPNS2Q8IVW8 549 aa10.94□□□□□ -0.66
PDLIM1P1-201ENST00000604187 FAM109AQ8N4B1 249 aa10.94□□□□□ -0.66
PDLIM1P1-201ENST00000604187 AFAP1L2Q8N4X5 818 aa10.94□□□□□ -0.66
PDLIM1P1-201ENST00000604187 RELL2Q8NC24 303 aaPredicted RBP10.94□□□□□ -0.66
PDLIM1P1-201ENST00000604187 FBXO15Q8NCQ5 510 aaPredicted RBP10.94□□□□□ -0.66
PDLIM1P1-201ENST00000604187 ZNF740Q8NDX6 193 aa10.94□□□□□ -0.66
PDLIM1P1-201ENST00000604187 SLC35B2Q8TB61 432 aa10.94□□□□□ -0.66
PDLIM1P1-201ENST00000604187 RNASE6Q93091 150 aaKnown RBP10.94□□□□□ -0.66
PDLIM1P1-201ENST00000604187 SH3GL2Q99962 352 aa10.94□□□□□ -0.66
PDLIM1P1-201ENST00000604187 PLEKHF2Q9H8W4 249 aa10.94□□□□□ -0.66
PDLIM1P1-201ENST00000604187 TREX1Q9NSU2 369 aa10.94□□□□□ -0.66
PDLIM1P1-201ENST00000604187 HPF1Q9NWY4 346 aa10.94□□□□□ -0.66
PDLIM1P1-201ENST00000604187 ALKBH4Q9NXW9 302 aa10.94□□□□□ -0.66
PDLIM1P1-201ENST00000604187 DRG1Q9Y295 367 aaKnown RBP10.94□□□□□ -0.66
PDLIM1P1-201ENST00000604187 CRYL1Q9Y2S2 319 aa10.94□□□□□ -0.66
PDLIM1P1-201ENST00000604187 GTF3C1Q12789 2109 aa10.93□□□□□ -0.66
PDLIM1P1-201ENST00000604187 A0A1B0GVC2 190 aa10.93□□□□□ -0.66
PDLIM1P1-201ENST00000604187 ATP6AP2A0A1C7CYW4 349 aa10.93□□□□□ -0.66
PDLIM1P1-201ENST00000604187 GOLGA8KD6RF30 607 aa10.93□□□□□ -0.66
PDLIM1P1-201ENST00000604187 E5RI56 91 aa10.93□□□□□ -0.66
PDLIM1P1-201ENST00000604187 GOLGA8TH3BQL2 631 aa10.93□□□□□ -0.66
PDLIM1P1-201ENST00000604187 H7C1Q1 480 aa10.93□□□□□ -0.66
PDLIM1P1-201ENST00000604187 AQP7O14520 342 aa10.93□□□□□ -0.66
PDLIM1P1-201ENST00000604187 LCMT2O60294 686 aaKnown RBP10.93□□□□□ -0.66
PDLIM1P1-201ENST00000604187 ATP6AP2O75787 350 aa10.93□□□□□ -0.66
PDLIM1P1-201ENST00000604187 MYO1DO94832 1006 aa10.93□□□□□ -0.66
PDLIM1P1-201ENST00000604187 OR6B1O95007 311 aa10.93□□□□□ -0.66
PDLIM1P1-201ENST00000604187 ALOX12P18054 663 aa10.93□□□□□ -0.66
PDLIM1P1-201ENST00000604187 BMP5P22003 454 aa10.93□□□□□ -0.66
PDLIM1P1-201ENST00000604187 ARNTP27540 789 aa10.93□□□□□ -0.66
PDLIM1P1-201ENST00000604187 MAGEA5P43359 124 aa10.93□□□□□ -0.66
PDLIM1P1-201ENST00000604187 ASCL1P50553 236 aa10.93□□□□□ -0.66
PDLIM1P1-201ENST00000604187 SESN2P58004 480 aaPredicted RBP10.93□□□□□ -0.66
PDLIM1P1-201ENST00000604187 CUL1Q13616 776 aa10.93□□□□□ -0.66
PDLIM1P1-201ENST00000604187 PCID2Q5JVF3 399 aa10.93□□□□□ -0.66
PDLIM1P1-201ENST00000604187 Q5PR19 223 aa10.93□□□□□ -0.66
PDLIM1P1-201ENST00000604187 WLSQ5T9L3 541 aa10.93□□□□□ -0.66
PDLIM1P1-201ENST00000604187 RNF187Q5TA31 235 aaPredicted RBP10.93□□□□□ -0.66
PDLIM1P1-201ENST00000604187 NDUFAF5Q5TEU4 345 aa10.93□□□□□ -0.66
PDLIM1P1-201ENST00000604187 SHEQ5VZ18 495 aa10.93□□□□□ -0.66
PDLIM1P1-201ENST00000604187 MRNIPQ6NTE8 343 aa10.93□□□□□ -0.66
PDLIM1P1-201ENST00000604187 GK5Q6ZS86 529 aa10.93□□□□□ -0.66
PDLIM1P1-201ENST00000604187 KIAA0408Q6ZU52 694 aa10.93□□□□□ -0.66
PDLIM1P1-201ENST00000604187 SDCCAG8Q86SQ7 713 aaPredicted RBP10.93□□□□□ -0.66
PDLIM1P1-201ENST00000604187 CIARTQ8N365 385 aaPredicted RBP10.93□□□□□ -0.66
PDLIM1P1-201ENST00000604187 VWA5B2Q8N398 1253 aa10.93□□□□□ -0.66
PDLIM1P1-201ENST00000604187 TMEM251Q8N6I4 163 aa10.93□□□□□ -0.66
PDLIM1P1-201ENST00000604187 PRELID2Q8N945 189 aa10.93□□□□□ -0.66
PDLIM1P1-201ENST00000604187 MFSD9Q8NBP5 474 aa10.93□□□□□ -0.66
PDLIM1P1-201ENST00000604187 ARMC2Q8NEN0 867 aa10.93□□□□□ -0.66
PDLIM1P1-201ENST00000604187 B3GNT7Q8NFL0 401 aa10.93□□□□□ -0.66
PDLIM1P1-201ENST00000604187 GIMAP7Q8NHV1 300 aa10.93□□□□□ -0.66
PDLIM1P1-201ENST00000604187 SREK1Q8WXA9 508 aaKnown RBP10.93□□□□□ -0.66
PDLIM1P1-201ENST00000604187 ASB11Q8WXH4 323 aa10.93□□□□□ -0.66
PDLIM1P1-201ENST00000604187 ATG4AQ8WYN0 398 aa10.93□□□□□ -0.66
PDLIM1P1-201ENST00000604187 SLC30A3Q99726 388 aa10.93□□□□□ -0.66
PDLIM1P1-201ENST00000604187 FAM129AQ9BZQ8 928 aa10.93□□□□□ -0.66
PDLIM1P1-201ENST00000604187 NECTIN3Q9NQS3 549 aa10.93□□□□□ -0.66
PDLIM1P1-201ENST00000604187 RAB6BQ9NRW1 208 aa10.93□□□□□ -0.66
PDLIM1P1-201ENST00000604187 BEX4Q9NWD9 120 aaPredicted RBP10.93□□□□□ -0.66
PDLIM1P1-201ENST00000604187 ZNF223Q9UK11 482 aaPredicted RBP10.93□□□□□ -0.66
PDLIM1P1-201ENST00000604187 HCFC1P51610 2035 aa10.92□□□□□ -0.66
PDLIM1P1-201ENST00000604187 TCRBV7S2A1N4TA0A589 114 aa10.92□□□□□ -0.66
PDLIM1P1-201ENST00000604187 TUBAL3A6NHL2 446 aa10.92□□□□□ -0.66
PDLIM1P1-201ENST00000604187 INAFM1C9JVW0 142 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms