RNA–Protein interactions for RNA: ENST00000600097.1

SMG9-210, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 538 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-210ENST00000600097 ZFP69BQ9UJL9 534 aa16.09■□□□□ 0.17
SMG9-210ENST00000600097 URADA6NGE7 173 aa16.08■□□□□ 0.16
SMG9-210ENST00000600097 ZNF888P0CJ79 500 aaPredicted RBP16.08■□□□□ 0.16
SMG9-210ENST00000600097 PTGER1P34995 402 aa16.08■□□□□ 0.16
SMG9-210ENST00000600097 AHRP35869 848 aa16.08■□□□□ 0.16
SMG9-210ENST00000600097 OLR1P78380 273 aa16.08■□□□□ 0.16
SMG9-210ENST00000600097 TIAL1Q01085 375 aaKnown RBP eCLIP16.08■□□□□ 0.16
SMG9-210ENST00000600097 TMEM211Q6ICI0 200 aa16.08■□□□□ 0.16
SMG9-210ENST00000600097 PAQR3Q6TCH7 311 aa16.08■□□□□ 0.16
SMG9-210ENST00000600097 C2CD4AQ8NCU7 369 aaPredicted RBP16.08■□□□□ 0.16
SMG9-210ENST00000600097 ARMC2Q8NEN0 867 aa16.08■□□□□ 0.16
SMG9-210ENST00000600097 OR56A3Q8NH54 315 aa16.08■□□□□ 0.16
SMG9-210ENST00000600097 ASB5Q8WWX0 329 aa16.08■□□□□ 0.16
SMG9-210ENST00000600097 ATL1Q8WXF7 558 aa16.08■□□□□ 0.16
SMG9-210ENST00000600097 PYCR2Q96C36 320 aa16.08■□□□□ 0.16
SMG9-210ENST00000600097 LINGO1Q96FE5 620 aa16.08■□□□□ 0.16
SMG9-210ENST00000600097 SIGLEC10Q96LC7 697 aa16.08■□□□□ 0.16
SMG9-210ENST00000600097 PRDM9Q9NQV7 894 aa16.08■□□□□ 0.16
SMG9-210ENST00000600097 ARL15Q9NXU5 204 aa16.08■□□□□ 0.16
SMG9-210ENST00000600097 SETD2Q9BYW2 2564 aaPredicted RBP16.07■□□□□ 0.16
SMG9-210ENST00000600097 IGKV3D-11A0A0A0MRZ8 115 aa16.07■□□□□ 0.16
SMG9-210ENST00000600097 TCRBV16S1A1N1A0A5B0 115 aa16.07■□□□□ 0.16
SMG9-210ENST00000600097 PSMD12O00232 456 aaPredicted RBP16.07■□□□□ 0.16
SMG9-210ENST00000600097 ZSCAN12O43309 604 aa16.07■□□□□ 0.16
SMG9-210ENST00000600097 DNAJB6O75190 326 aa16.07■□□□□ 0.16
SMG9-210ENST00000600097 TPOP07202 933 aa16.07■□□□□ 0.16
SMG9-210ENST00000600097 RNH1P13489 461 aaKnown RBP16.07■□□□□ 0.16
SMG9-210ENST00000600097 MEOX1P50221 254 aa16.07■□□□□ 0.16
SMG9-210ENST00000600097 IL2P60568 153 aa16.07■□□□□ 0.16
SMG9-210ENST00000600097 BTG2P78543 158 aa16.07■□□□□ 0.16
SMG9-210ENST00000600097 CSHL1Q14406 222 aa16.07■□□□□ 0.16
SMG9-210ENST00000600097 TTC27Q6P3X3 843 aa16.07■□□□□ 0.16
SMG9-210ENST00000600097 AGGF1Q8N302 714 aaeCLIP16.07■□□□□ 0.16
SMG9-210ENST00000600097 NFAM1Q8NET5 270 aaPredicted RBP16.07■□□□□ 0.16
SMG9-210ENST00000600097 C16orf52Q8NHV5 167 aa16.07■□□□□ 0.16
SMG9-210ENST00000600097 MAGOHBQ96A72 148 aaKnown RBP16.07■□□□□ 0.16
SMG9-210ENST00000600097 OR4K3Q96R72 315 aa16.07■□□□□ 0.16
SMG9-210ENST00000600097 A0A1B0GTH9 108 aa16.06■□□□□ 0.16
SMG9-210ENST00000600097 FOXO6A8MYZ6 492 aa16.06■□□□□ 0.16
SMG9-210ENST00000600097 B3GALT4O96024 378 aa16.06■□□□□ 0.16
SMG9-210ENST00000600097 PGAM1P18669 254 aa16.06■□□□□ 0.16
SMG9-210ENST00000600097 MAOAP21397 527 aa16.06■□□□□ 0.16
SMG9-210ENST00000600097 SCTRP47872 440 aa16.06■□□□□ 0.16
SMG9-210ENST00000600097 CLCN2P51788 898 aa16.06■□□□□ 0.16
SMG9-210ENST00000600097 TERF2Q15554 542 aa16.06■□□□□ 0.16
SMG9-210ENST00000600097 CATSPEREQ5SY80 951 aa16.06■□□□□ 0.16
SMG9-210ENST00000600097 CD163Q86VB7 1156 aa16.06■□□□□ 0.16
SMG9-210ENST00000600097 SULF2Q8IWU5 870 aa16.06■□□□□ 0.16
SMG9-210ENST00000600097 NAT8LQ8N9F0 302 aa16.06■□□□□ 0.16
SMG9-210ENST00000600097 ZFP62Q8NB50 900 aaPredicted RBP16.06■□□□□ 0.16
SMG9-210ENST00000600097 TRPV3Q8NET8 790 aa16.06■□□□□ 0.16
SMG9-210ENST00000600097 UTP15Q8TED0 518 aaKnown RBP16.06■□□□□ 0.16
SMG9-210ENST00000600097 SLC5A11Q8WWX8 675 aa16.06■□□□□ 0.16
SMG9-210ENST00000600097 FBXL8Q96CD0 374 aa16.06■□□□□ 0.16
SMG9-210ENST00000600097 MED13LQ71F56 2210 aa16.05■□□□□ 0.16
SMG9-210ENST00000600097 USP27XA6NNY8 438 aa16.05■□□□□ 0.16
SMG9-210ENST00000600097 PEX1O43933 1283 aa16.05■□□□□ 0.16
SMG9-210ENST00000600097 HS6ST1O60243 411 aa16.05■□□□□ 0.16
SMG9-210ENST00000600097 TTC4O95801 387 aa16.05■□□□□ 0.16
SMG9-210ENST00000600097 ENO2P09104 434 aaPredicted RBP16.05■□□□□ 0.16
SMG9-210ENST00000600097 IGFBP2P18065 325 aa16.05■□□□□ 0.16
SMG9-210ENST00000600097 TFEBP19484 476 aa16.05■□□□□ 0.16
SMG9-210ENST00000600097 CHRNB4P30926 498 aa16.05■□□□□ 0.16
SMG9-210ENST00000600097 CDKN2DP55273 166 aa16.05■□□□□ 0.16
SMG9-210ENST00000600097 PDAP1Q13442 181 aaKnown RBP16.05■□□□□ 0.16
SMG9-210ENST00000600097 CRYMQ14894 314 aa16.05■□□□□ 0.16
SMG9-210ENST00000600097 CMPK2Q5EBM0 449 aa16.05■□□□□ 0.16
SMG9-210ENST00000600097 ARHGAP11AQ6P4F7 1023 aa16.05■□□□□ 0.16
SMG9-210ENST00000600097 CCDC137Q6PK04 289 aaKnown RBP16.05■□□□□ 0.16
SMG9-210ENST00000600097 KIAA0408Q6ZU52 694 aa16.05■□□□□ 0.16
SMG9-210ENST00000600097 CYP4Z2PQ8N1L4 340 aa16.05■□□□□ 0.16
SMG9-210ENST00000600097 TMEM156Q8N614 296 aa16.05■□□□□ 0.16
SMG9-210ENST00000600097 GPATCH11Q8N954 259 aa16.05■□□□□ 0.16
SMG9-210ENST00000600097 APCDD1LQ8NCL9 501 aa16.05■□□□□ 0.16
SMG9-210ENST00000600097 B3GNT7Q8NFL0 401 aa16.05■□□□□ 0.16
SMG9-210ENST00000600097 LILRB4Q8NHJ6 448 aa16.05■□□□□ 0.16
SMG9-210ENST00000600097 NEIL2Q969S2 332 aa16.05■□□□□ 0.16
SMG9-210ENST00000600097 SLC6A16Q9GZN6 736 aa16.05■□□□□ 0.16
SMG9-210ENST00000600097 TP63Q9H3D4 680 aaPredicted RBP16.05■□□□□ 0.16
SMG9-210ENST00000600097 NEU2Q9Y3R4 380 aa16.05■□□□□ 0.16
SMG9-210ENST00000600097 MMACHCQ9Y4U1 282 aa16.05■□□□□ 0.16
SMG9-210ENST00000600097 MTORP42345 2549 aa16.05■□□□□ 0.16
SMG9-210ENST00000600097 AKAP9Q99996 3911 aa16.04■□□□□ 0.16
SMG9-210ENST00000600097 TRBV11-1A0A0K0K1C0 115 aa16.04■□□□□ 0.16
SMG9-210ENST00000600097 CDC40O60508 579 aaKnown RBP eCLIP16.04■□□□□ 0.16
SMG9-210ENST00000600097 AHSGP02765 367 aa16.04■□□□□ 0.16
SMG9-210ENST00000600097 GABRB3P28472 473 aa16.04■□□□□ 0.16
SMG9-210ENST00000600097 RFC3P40938 356 aa16.04■□□□□ 0.16
SMG9-210ENST00000600097 RAB8AP61006 207 aa16.04■□□□□ 0.16
SMG9-210ENST00000600097 REEP5Q00765 189 aa16.04■□□□□ 0.16
SMG9-210ENST00000600097 RBM20Q5T481 1227 aaKnown RBP16.04■□□□□ 0.16
SMG9-210ENST00000600097 PAOXQ6QHF9 649 aa16.04■□□□□ 0.16
SMG9-210ENST00000600097 CEP128Q6ZU80 1094 aa16.04■□□□□ 0.16
SMG9-210ENST00000600097 GALNT7Q86SF2 657 aa16.04■□□□□ 0.16
SMG9-210ENST00000600097 CNTN4Q8IWV2 1026 aa16.04■□□□□ 0.16
SMG9-210ENST00000600097 PPIL6Q8IXY8 311 aa16.04■□□□□ 0.16
SMG9-210ENST00000600097 MARVELD2Q8N4S9 558 aa16.04■□□□□ 0.16
SMG9-210ENST00000600097 RND1Q92730 232 aa16.04■□□□□ 0.16
SMG9-210ENST00000600097 AIF1LQ9BQI0 150 aa16.04■□□□□ 0.16
SMG9-210ENST00000600097 SPNS1Q9H2V7 528 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms