RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-223ENST00000599223 C2CD3Q4AC94 2353 aa13.76□□□□□ -0.21
IRF3-223ENST00000599223 IGKV3D-11A0A0A0MRZ8 115 aa13.75□□□□□ -0.21
IRF3-223ENST00000599223 NME2P1O60361 137 aa13.75□□□□□ -0.21
IRF3-223ENST00000599223 SLC25A12O75746 678 aa13.75□□□□□ -0.21
IRF3-223ENST00000599223 SERPIND1P05546 499 aa13.75□□□□□ -0.21
IRF3-223ENST00000599223 SP1P08047 785 aa13.75□□□□□ -0.21
IRF3-223ENST00000599223 RHOXF2BP0C7M4 288 aa13.75□□□□□ -0.21
IRF3-223ENST00000599223 MYBL2P10244 700 aa13.75□□□□□ -0.21
IRF3-223ENST00000599223 COX6B1P14854 86 aa13.75□□□□□ -0.21
IRF3-223ENST00000599223 CD46P15529 392 aa13.75□□□□□ -0.21
IRF3-223ENST00000599223 NME2P22392 152 aa13.75□□□□□ -0.21
IRF3-223ENST00000599223 GRK3P35626 688 aa13.75□□□□□ -0.21
IRF3-223ENST00000599223 SCTRP47872 440 aa13.75□□□□□ -0.21
IRF3-223ENST00000599223 CASP6P55212 293 aa13.75□□□□□ -0.21
IRF3-223ENST00000599223 REEP5Q00765 189 aa13.75□□□□□ -0.21
IRF3-223ENST00000599223 ACTN3Q08043 901 aaPredicted RBP13.75□□□□□ -0.21
IRF3-223ENST00000599223 PWP1Q13610 501 aa13.75□□□□□ -0.21
IRF3-223ENST00000599223 DUPD1Q68J44 220 aa13.75□□□□□ -0.21
IRF3-223ENST00000599223 TRMT10BQ6PF06 316 aaKnown RBP13.75□□□□□ -0.21
IRF3-223ENST00000599223 C3P1Q6ZMU1 363 aa13.75□□□□□ -0.21
IRF3-223ENST00000599223 MAATS1Q7Z4T9 603 aa13.75□□□□□ -0.21
IRF3-223ENST00000599223 LGI4Q8N135 537 aa13.75□□□□□ -0.21
IRF3-223ENST00000599223 ANKRD53Q8N9V6 530 aa13.75□□□□□ -0.21
IRF3-223ENST00000599223 TMEM178AQ8NBL3 297 aa13.75□□□□□ -0.21
IRF3-223ENST00000599223 NT5CQ8TCD5 201 aa13.75□□□□□ -0.21
IRF3-223ENST00000599223 UTP15Q8TED0 518 aaKnown RBP13.75□□□□□ -0.21
IRF3-223ENST00000599223 FBXL8Q96CD0 374 aa13.75□□□□□ -0.21
IRF3-223ENST00000599223 CERS2Q96G23 380 aa13.75□□□□□ -0.21
IRF3-223ENST00000599223 SNF8Q96H20 258 aa13.75□□□□□ -0.21
IRF3-223ENST00000599223 PWWP2AQ96N64 755 aa13.75□□□□□ -0.21
IRF3-223ENST00000599223 RHOXF2Q9BQY4 288 aa13.75□□□□□ -0.21
IRF3-223ENST00000599223 HAUS8Q9BT25 410 aa13.75□□□□□ -0.21
IRF3-223ENST00000599223 FAM129AQ9BZQ8 928 aa13.75□□□□□ -0.21
IRF3-223ENST00000599223 CHST11Q9NPF2 352 aa13.75□□□□□ -0.21
IRF3-223ENST00000599223 LRFN1Q9P244 771 aa13.75□□□□□ -0.21
IRF3-223ENST00000599223 ZNF407Q9C0G0 2248 aa13.74□□□□□ -0.21
IRF3-223ENST00000599223 SAGE2PA6NJ88 616 aa13.74□□□□□ -0.21
IRF3-223ENST00000599223 ADAM10O14672 748 aa13.74□□□□□ -0.21
IRF3-223ENST00000599223 NDC80O14777 642 aa13.74□□□□□ -0.21
IRF3-223ENST00000599223 GUCA1CO95843 209 aa13.74□□□□□ -0.21
IRF3-223ENST00000599223 ZNF24P17028 368 aa13.74□□□□□ -0.21
IRF3-223ENST00000599223 IL10P22301 178 aa13.74□□□□□ -0.21
IRF3-223ENST00000599223 PTGER1P34995 402 aa13.74□□□□□ -0.21
IRF3-223ENST00000599223 HNF4AP41235 474 aa13.74□□□□□ -0.21
IRF3-223ENST00000599223 KIR3DL1P43629 444 aa13.74□□□□□ -0.21
IRF3-223ENST00000599223 FNTAP49354 379 aa13.74□□□□□ -0.21
IRF3-223ENST00000599223 AP1S2P56377 157 aa13.74□□□□□ -0.21
IRF3-223ENST00000599223 TAS2R50P59544 299 aa13.74□□□□□ -0.21
IRF3-223ENST00000599223 KRTAP10-9P60411 292 aa13.74□□□□□ -0.21
IRF3-223ENST00000599223 RAB8AP61006 207 aa13.74□□□□□ -0.21
IRF3-223ENST00000599223 PPP1R3AQ16821 1122 aa13.74□□□□□ -0.21
IRF3-223ENST00000599223 SPANXN3Q5MJ09 141 aa13.74□□□□□ -0.21
IRF3-223ENST00000599223 HP1BP3Q5SSJ5 553 aaPredicted RBP13.74□□□□□ -0.21
IRF3-223ENST00000599223 HECTD2Q5U5R9 776 aa13.74□□□□□ -0.21
IRF3-223ENST00000599223 XKRXQ6PP77 449 aa13.74□□□□□ -0.21
IRF3-223ENST00000599223 QSOX2Q6ZRP7 698 aa13.74□□□□□ -0.21
IRF3-223ENST00000599223 STRA8Q7Z7C7 330 aa13.74□□□□□ -0.21
IRF3-223ENST00000599223 RPS19BP1Q86WX3 136 aaKnown RBP13.74□□□□□ -0.21
IRF3-223ENST00000599223 PALM2Q8IXS6 379 aa13.74□□□□□ -0.21
IRF3-223ENST00000599223 GPATCH11Q8N954 259 aa13.74□□□□□ -0.21
IRF3-223ENST00000599223 NOA1Q8NC60 698 aaKnown RBP13.74□□□□□ -0.21
IRF3-223ENST00000599223 NFAM1Q8NET5 270 aaPredicted RBP13.74□□□□□ -0.21
IRF3-223ENST00000599223 AGAP11Q8TF27 550 aa13.74□□□□□ -0.21
IRF3-223ENST00000599223 SLC5A11Q8WWX8 675 aa13.74□□□□□ -0.21
IRF3-223ENST00000599223 SLC6A16Q9GZN6 736 aa13.74□□□□□ -0.21
IRF3-223ENST00000599223 KLHL31Q9H511 634 aa13.74□□□□□ -0.21
IRF3-223ENST00000599223 NECTIN3Q9NQS3 549 aa13.74□□□□□ -0.21
IRF3-223ENST00000599223 ASB1Q9Y576 335 aa13.74□□□□□ -0.21
IRF3-223ENST00000599223 TCRBV16S1A1N1A0A5B0 115 aa13.73□□□□□ -0.21
IRF3-223ENST00000599223 DNALI1O14645 258 aaPredicted RBP13.73□□□□□ -0.21
IRF3-223ENST00000599223 ASNA1O43681 348 aa13.73□□□□□ -0.21
IRF3-223ENST00000599223 HIST1H2AGP0C0S8 130 aaPredicted RBP13.73□□□□□ -0.21
IRF3-223ENST00000599223 ESRRAP11474 423 aaPredicted RBP13.73□□□□□ -0.21
IRF3-223ENST00000599223 HIST1H2ADP20671 130 aa13.73□□□□□ -0.21
IRF3-223ENST00000599223 AGAP20933 346 aa13.73□□□□□ -0.21
IRF3-223ENST00000599223 JAK1P23458 1154 aa13.73□□□□□ -0.21
IRF3-223ENST00000599223 RFC3P40938 356 aa13.73□□□□□ -0.21
IRF3-223ENST00000599223 ITGA8P53708 1063 aa13.73□□□□□ -0.21
IRF3-223ENST00000599223 MLF1P58340 268 aa13.73□□□□□ -0.21
IRF3-223ENST00000599223 IL2P60568 153 aa13.73□□□□□ -0.21
IRF3-223ENST00000599223 RGS1Q08116 209 aa13.73□□□□□ -0.21
IRF3-223ENST00000599223 PDAP1Q13442 181 aaKnown RBP13.73□□□□□ -0.21
IRF3-223ENST00000599223 ZNF460Q14592 562 aa13.73□□□□□ -0.21
IRF3-223ENST00000599223 PPP1R7Q15435 360 aa13.73□□□□□ -0.21
IRF3-223ENST00000599223 MAPKAPK3Q16644 382 aa13.73□□□□□ -0.21
IRF3-223ENST00000599223 BBS9Q3SYG4 887 aa13.73□□□□□ -0.21
IRF3-223ENST00000599223 KRTCAP3Q53RY4 240 aa13.73□□□□□ -0.21
IRF3-223ENST00000599223 TEDDM1Q5T9Z0 273 aa13.73□□□□□ -0.21
IRF3-223ENST00000599223 SLC25A25Q6KCM7 469 aa13.73□□□□□ -0.21
IRF3-223ENST00000599223 KIAA0408Q6ZU52 694 aa13.73□□□□□ -0.21
IRF3-223ENST00000599223 GALNT7Q86SF2 657 aa13.73□□□□□ -0.21
IRF3-223ENST00000599223 TMPRSS11BQ86T26 416 aa13.73□□□□□ -0.21
IRF3-223ENST00000599223 KLHL7Q8IXQ5 586 aa13.73□□□□□ -0.21
IRF3-223ENST00000599223 CYP4X1Q8N118 509 aa13.73□□□□□ -0.21
IRF3-223ENST00000599223 CFAP36Q96G28 342 aa13.73□□□□□ -0.21
IRF3-223ENST00000599223 HIST1H2AHQ96KK5 128 aa13.73□□□□□ -0.21
IRF3-223ENST00000599223 PTCHD1Q96NR3 888 aa13.73□□□□□ -0.21
IRF3-223ENST00000599223 KRT12Q99456 494 aa13.73□□□□□ -0.21
IRF3-223ENST00000599223 HIST1H2AJQ99878 128 aa13.73□□□□□ -0.21
IRF3-223ENST00000599223 H2AFJQ9BTM1 129 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms