RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 CMPK2Q5EBM0 449 aa17.22■□□□□ 0.35
CCDC43-204ENST00000588687 CATSPEREQ5SY80 951 aa17.22■□□□□ 0.35
CCDC43-204ENST00000588687 MEX3BQ6ZN04 569 aaKnown RBP17.22■□□□□ 0.35
CCDC43-204ENST00000588687 CD163Q86VB7 1156 aa17.22■□□□□ 0.35
CCDC43-204ENST00000588687 CNTN4Q8IWV2 1026 aa17.22■□□□□ 0.35
CCDC43-204ENST00000588687 MYO1HQ8N1T3 1032 aa17.22■□□□□ 0.35
CCDC43-204ENST00000588687 ANKRD53Q8N9V6 530 aa17.22■□□□□ 0.35
CCDC43-204ENST00000588687 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.22■□□□□ 0.35
CCDC43-204ENST00000588687 FAM57AQ8TBR7 257 aa17.22■□□□□ 0.35
CCDC43-204ENST00000588687 UTP15Q8TED0 518 aaKnown RBP17.22■□□□□ 0.35
CCDC43-204ENST00000588687 NEIL2Q969S2 332 aa17.22■□□□□ 0.35
CCDC43-204ENST00000588687 ALKBH8Q96BT7 664 aaKnown RBP17.22■□□□□ 0.35
CCDC43-204ENST00000588687 SDCCAG3Q96C92 435 aa17.22■□□□□ 0.35
CCDC43-204ENST00000588687 SNF8Q96H20 258 aa17.22■□□□□ 0.35
CCDC43-204ENST00000588687 SLC6A16Q9GZN6 736 aa17.22■□□□□ 0.35
CCDC43-204ENST00000588687 PLAC1Q9HBJ0 212 aa17.22■□□□□ 0.35
CCDC43-204ENST00000588687 NECTIN3Q9NQS3 549 aa17.22■□□□□ 0.35
CCDC43-204ENST00000588687 TAS2R13Q9NYV9 303 aa17.22■□□□□ 0.35
CCDC43-204ENST00000588687 ZFP69BQ9UJL9 534 aa17.22■□□□□ 0.35
CCDC43-204ENST00000588687 ZNF223Q9UK11 482 aaPredicted RBP17.22■□□□□ 0.35
CCDC43-204ENST00000588687 IKZF3Q9UKT9 509 aa17.22■□□□□ 0.35
CCDC43-204ENST00000588687 PPT2Q9UMR5 302 aa17.22■□□□□ 0.35
CCDC43-204ENST00000588687 CLDN16Q9Y5I7 305 aa17.22■□□□□ 0.35
CCDC43-204ENST00000588687 MAD1L1Q9Y6D9 718 aa17.22■□□□□ 0.35
CCDC43-204ENST00000588687 ZNF407Q9C0G0 2248 aa17.22■□□□□ 0.35
CCDC43-204ENST00000588687 VPS13CQ709C8 3753 aa17.22■□□□□ 0.35
CCDC43-204ENST00000588687 SMIM10L1P0DMW3 83 aa17.21■□□□□ 0.35
CCDC43-204ENST00000588687 MEOX1P50221 254 aa17.21■□□□□ 0.35
CCDC43-204ENST00000588687 NR0B1P51843 470 aaKnown RBP17.21■□□□□ 0.35
CCDC43-204ENST00000588687 REEP5Q00765 189 aa17.21■□□□□ 0.35
CCDC43-204ENST00000588687 DUPD1Q68J44 220 aa17.21■□□□□ 0.35
CCDC43-204ENST00000588687 UGT3A1Q6NUS8 523 aa17.21■□□□□ 0.35
CCDC43-204ENST00000588687 RASGEF1CQ8N431 466 aa17.21■□□□□ 0.35
CCDC43-204ENST00000588687 ZFP62Q8NB50 900 aaPredicted RBP17.21■□□□□ 0.35
CCDC43-204ENST00000588687 POGLUT1Q8NBL1 392 aa17.21■□□□□ 0.35
CCDC43-204ENST00000588687 TRIM58Q8NG06 486 aa17.21■□□□□ 0.35
CCDC43-204ENST00000588687 C16orf52Q8NHV5 167 aa17.21■□□□□ 0.35
CCDC43-204ENST00000588687 CHTF18Q8WVB6 975 aa17.21■□□□□ 0.35
CCDC43-204ENST00000588687 SMIM10Q96HG1 83 aa17.21■□□□□ 0.35
CCDC43-204ENST00000588687 PTCHD1Q96NR3 888 aa17.21■□□□□ 0.35
CCDC43-204ENST00000588687 SLC17A6Q9P2U8 582 aa17.21■□□□□ 0.35
CCDC43-204ENST00000588687 PHF3Q92576 2039 aaKnown RBP17.21■□□□□ 0.35
CCDC43-204ENST00000588687 NIPBLQ6KC79 2804 aaeCLIP17.2■□□□□ 0.34
CCDC43-204ENST00000588687 A0A1B0GTH9 108 aa17.2■□□□□ 0.34
CCDC43-204ENST00000588687 PRMT3O60678 531 aa17.2■□□□□ 0.34
CCDC43-204ENST00000588687 AHRP35869 848 aa17.2■□□□□ 0.34
CCDC43-204ENST00000588687 RFC3P40938 356 aa17.2■□□□□ 0.34
CCDC43-204ENST00000588687 AP1S2P56377 157 aa17.2■□□□□ 0.34
CCDC43-204ENST00000588687 PPP1R3AQ16821 1122 aa17.2■□□□□ 0.34
CCDC43-204ENST00000588687 NIPAL1Q6NVV3 410 aa17.2■□□□□ 0.34
CCDC43-204ENST00000588687 SULF2Q8IWU5 870 aa17.2■□□□□ 0.34
CCDC43-204ENST00000588687 RPRMLQ8N4K4 120 aa17.2■□□□□ 0.34
CCDC43-204ENST00000588687 CA5BP1Q8WTZ4 195 aa17.2■□□□□ 0.34
CCDC43-204ENST00000588687 FBXL8Q96CD0 374 aa17.2■□□□□ 0.34
CCDC43-204ENST00000588687 PRDM9Q9NQV7 894 aa17.2■□□□□ 0.34
CCDC43-204ENST00000588687 ARL15Q9NXU5 204 aa17.2■□□□□ 0.34
CCDC43-204ENST00000588687 PPIEQ9UNP9 301 aaKnown RBP17.2■□□□□ 0.34
CCDC43-204ENST00000588687 KLF13Q9Y2Y9 288 aaPredicted RBP17.2■□□□□ 0.34
CCDC43-204ENST00000588687 DNAJC13O75165 2243 aa17.2■□□□□ 0.34
CCDC43-204ENST00000588687 TGFBR3LH3BV60 316 aa17.19■□□□□ 0.34
CCDC43-204ENST00000588687 TFECO14948 347 aaPredicted RBP17.19■□□□□ 0.34
CCDC43-204ENST00000588687 CCDC175P0C221 793 aa17.19■□□□□ 0.34
CCDC43-204ENST00000588687 PGAM1P18669 254 aa17.19■□□□□ 0.34
CCDC43-204ENST00000588687 TFEBP19484 476 aa17.19■□□□□ 0.34
CCDC43-204ENST00000588687 PTGS2P35354 604 aa17.19■□□□□ 0.34
CCDC43-204ENST00000588687 SKP1P63208 163 aa17.19■□□□□ 0.34
CCDC43-204ENST00000588687 RGS1Q08116 209 aa17.19■□□□□ 0.34
CCDC43-204ENST00000588687 EMC4Q5J8M3 183 aa17.19■□□□□ 0.34
CCDC43-204ENST00000588687 RNASEH2BQ5TBB1 312 aaKnown RBP17.19■□□□□ 0.34
CCDC43-204ENST00000588687 SBSNQ6UWP8 590 aa17.19■□□□□ 0.34
CCDC43-204ENST00000588687 ABHD13Q7L211 337 aa17.19■□□□□ 0.34
CCDC43-204ENST00000588687 MDGA2Q7Z553 956 aa17.19■□□□□ 0.34
CCDC43-204ENST00000588687 GALNT7Q86SF2 657 aa17.19■□□□□ 0.34
CCDC43-204ENST00000588687 SCUBE1Q8IWY4 988 aa17.19■□□□□ 0.34
CCDC43-204ENST00000588687 CYP4X1Q8N118 509 aa17.19■□□□□ 0.34
CCDC43-204ENST00000588687 SLC5A11Q8WWX8 675 aa17.19■□□□□ 0.34
CCDC43-204ENST00000588687 MAGOHBQ96A72 148 aaKnown RBP17.19■□□□□ 0.34
CCDC43-204ENST00000588687 MS4A14Q96JA4 679 aa17.19■□□□□ 0.34
CCDC43-204ENST00000588687 KLHL31Q9H511 634 aa17.19■□□□□ 0.34
CCDC43-204ENST00000588687 CLK4Q9HAZ1 481 aaKnown RBP17.19■□□□□ 0.34
CCDC43-204ENST00000588687 HS6ST1O60243 411 aa17.18■□□□□ 0.34
CCDC43-204ENST00000588687 BANF1O75531 89 aa17.18■□□□□ 0.34
CCDC43-204ENST00000588687 AHSGP02765 367 aa17.18■□□□□ 0.34
CCDC43-204ENST00000588687 RNH1P13489 461 aaKnown RBP17.18■□□□□ 0.34
CCDC43-204ENST00000588687 GPR143P51810 404 aa17.18■□□□□ 0.34
CCDC43-204ENST00000588687 RAB8AP61006 207 aa17.18■□□□□ 0.34
CCDC43-204ENST00000588687 TERF2Q15554 542 aa17.18■□□□□ 0.34
CCDC43-204ENST00000588687 CCDC137Q6PK04 289 aaKnown RBP17.18■□□□□ 0.34
CCDC43-204ENST00000588687 KIAA0408Q6ZU52 694 aa17.18■□□□□ 0.34
CCDC43-204ENST00000588687 PALM2Q8IXS6 379 aa17.18■□□□□ 0.34
CCDC43-204ENST00000588687 EID3Q8N140 333 aa17.18■□□□□ 0.34
CCDC43-204ENST00000588687 CA13Q8N1Q1 262 aa17.18■□□□□ 0.34
CCDC43-204ENST00000588687 B3GNT7Q8NFL0 401 aa17.18■□□□□ 0.34
CCDC43-204ENST00000588687 CREB3L4Q8TEY5 395 aa17.18■□□□□ 0.34
CCDC43-204ENST00000588687 TMEM125Q96AQ2 219 aa17.18■□□□□ 0.34
CCDC43-204ENST00000588687 TSNARE1Q96NA8 513 aa17.18■□□□□ 0.34
CCDC43-204ENST00000588687 DEPPQ9NTK1 212 aa17.18■□□□□ 0.34
CCDC43-204ENST00000588687 ZFATQ9P243 1243 aa17.18■□□□□ 0.34
CCDC43-204ENST00000588687 TNFRSF10DQ9UBN6 386 aa17.18■□□□□ 0.34
CCDC43-204ENST00000588687 DNHD1Q96M86 4753 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms