RNA–Protein interactions for RNA: ENST00000588618.5

ACTN4-210, Transcript of actinin alpha 4, humanhuman

TSL 1 (best)

Gene ACTN4, Length 1,729 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-210ENST00000588618 LHX9Q9NQ69 397 aa21.53■■□□□ 1.04
ACTN4-210ENST00000588618 RARRES3Q9UL19 164 aa21.53■■□□□ 1.04
ACTN4-210ENST00000588618 CLCA2Q9UQC9 943 aa21.53■■□□□ 1.04
ACTN4-210ENST00000588618 EFCAB7A8K855 629 aa21.52■■□□□ 1.04
ACTN4-210ENST00000588618 PLPP1O14494 284 aa21.52■■□□□ 1.04
ACTN4-210ENST00000588618 SSR2P43308 183 aa21.52■■□□□ 1.04
ACTN4-210ENST00000588618 RAB8AP61006 207 aa21.52■■□□□ 1.04
ACTN4-210ENST00000588618 EMX2Q04743 252 aa21.52■■□□□ 1.04
ACTN4-210ENST00000588618 C16orf72Q14CZ0 275 aa21.52■■□□□ 1.04
ACTN4-210ENST00000588618 COMMD6Q7Z4G1 85 aa21.52■■□□□ 1.04
ACTN4-210ENST00000588618 UBE3DQ7Z6J8 389 aa21.52■■□□□ 1.04
ACTN4-210ENST00000588618 NUDT13Q86X67 352 aa21.52■■□□□ 1.04
ACTN4-210ENST00000588618 PARP9Q8IXQ6 854 aa21.52■■□□□ 1.04
ACTN4-210ENST00000588618 METTL4Q8N3J2 472 aa21.52■■□□□ 1.04
ACTN4-210ENST00000588618 CHTF18Q8WVB6 975 aa21.52■■□□□ 1.04
ACTN4-210ENST00000588618 SLC45A3Q96JT2 553 aa21.52■■□□□ 1.04
ACTN4-210ENST00000588618 SLC7A5P2Q9GIP4 190 aa21.52■■□□□ 1.04
ACTN4-210ENST00000588618 ZNF385DQ9H6B1 395 aa21.52■■□□□ 1.04
ACTN4-210ENST00000588618 DLGAP4Q9Y2H0 992 aa21.52■■□□□ 1.04
ACTN4-210ENST00000588618 POLR3HQ9Y535 204 aaPredicted RBP21.52■■□□□ 1.04
ACTN4-210ENST00000588618 GNG14A0A1W2PPG7 69 aa21.52■■□□□ 1.03
ACTN4-210ENST00000588618 RTCAO00442 366 aaKnown RBP21.52■■□□□ 1.03
ACTN4-210ENST00000588618 TM4SF5O14894 197 aa21.52■■□□□ 1.03
ACTN4-210ENST00000588618 ZNF888P0CJ79 500 aaPredicted RBP21.52■■□□□ 1.03
ACTN4-210ENST00000588618 ARFIP1P53367 373 aa21.52■■□□□ 1.03
ACTN4-210ENST00000588618 STX1BP61266 288 aa21.52■■□□□ 1.03
ACTN4-210ENST00000588618 SKP1P63208 163 aa21.52■■□□□ 1.03
ACTN4-210ENST00000588618 RAE1P78406 368 aaKnown RBP21.52■■□□□ 1.03
ACTN4-210ENST00000588618 HERC3Q15034 1050 aa21.52■■□□□ 1.03
ACTN4-210ENST00000588618 RPS6KA2Q15349 733 aa21.52■■□□□ 1.03
ACTN4-210ENST00000588618 ISXQ2M1V0 245 aa21.52■■□□□ 1.03
ACTN4-210ENST00000588618 CDCP2Q5VXM1 449 aa21.52■■□□□ 1.03
ACTN4-210ENST00000588618 TMEM214Q6NUQ4 689 aaKnown RBP21.52■■□□□ 1.03
ACTN4-210ENST00000588618 TLDC1Q6P9B6 456 aa21.52■■□□□ 1.03
ACTN4-210ENST00000588618 RIPOR1Q6ZS17 1223 aa21.52■■□□□ 1.03
ACTN4-210ENST00000588618 ZNF501Q96CX3 271 aaPredicted RBP21.52■■□□□ 1.03
ACTN4-210ENST00000588618 FCRL1Q96LA6 429 aa21.52■■□□□ 1.03
ACTN4-210ENST00000588618 ZNF285Q96NJ3 590 aa21.52■■□□□ 1.03
ACTN4-210ENST00000588618 TBCDQ9BTW9 1192 aa21.52■■□□□ 1.03
ACTN4-210ENST00000588618 ROGDIQ9GZN7 287 aa21.52■■□□□ 1.03
ACTN4-210ENST00000588618 A0A0G2JN53 185 aa21.51■■□□□ 1.03
ACTN4-210ENST00000588618 HYKKA2RU49 373 aa21.51■■□□□ 1.03
ACTN4-210ENST00000588618 CCDC22O60826 627 aa21.51■■□□□ 1.03
ACTN4-210ENST00000588618 CSO75390 466 aaKnown RBP21.51■■□□□ 1.03
ACTN4-210ENST00000588618 CD1EP15812 388 aa21.51■■□□□ 1.03
ACTN4-210ENST00000588618 SDHBP21912 280 aa21.51■■□□□ 1.03
ACTN4-210ENST00000588618 TSFMP43897 325 aaKnown RBP21.51■■□□□ 1.03
ACTN4-210ENST00000588618 PRTGQ2VWP7 1150 aa21.51■■□□□ 1.03
ACTN4-210ENST00000588618 FAM214AQ32MH5 1076 aa21.51■■□□□ 1.03
ACTN4-210ENST00000588618 GARNL3Q5VVW2 1013 aa21.51■■□□□ 1.03
ACTN4-210ENST00000588618 IL23RQ5VWK5 629 aa21.51■■□□□ 1.03
ACTN4-210ENST00000588618 OR4C11Q6IEV9 310 aa21.51■■□□□ 1.03
ACTN4-210ENST00000588618 ABHD17CQ6PCB6 329 aa21.51■■□□□ 1.03
ACTN4-210ENST00000588618 OR8K5Q8NH50 307 aa21.51■■□□□ 1.03
ACTN4-210ENST00000588618 OR1L3Q8NH93 324 aa21.51■■□□□ 1.03
ACTN4-210ENST00000588618 UTP15Q8TED0 518 aaKnown RBP21.51■■□□□ 1.03
ACTN4-210ENST00000588618 SPRTNQ9H040 489 aaPredicted RBP21.51■■□□□ 1.03
ACTN4-210ENST00000588618 MYLK2Q9H1R3 596 aa21.51■■□□□ 1.03
ACTN4-210ENST00000588618 SAR1AQ9NR31 198 aa21.51■■□□□ 1.03
ACTN4-210ENST00000588618 MRGBPQ9NV56 204 aa21.51■■□□□ 1.03
ACTN4-210ENST00000588618 FCHO1O14526 889 aa21.5■■□□□ 1.03
ACTN4-210ENST00000588618 PCDH7O60245 1069 aa21.5■■□□□ 1.03
ACTN4-210ENST00000588618 DCTN3O75935 186 aa21.5■■□□□ 1.03
ACTN4-210ENST00000588618 KLHL18O94889 574 aa21.5■■□□□ 1.03
ACTN4-210ENST00000588618 B3GALT4O96024 378 aa21.5■■□□□ 1.03
ACTN4-210ENST00000588618 KLK1P06870 262 aa21.5■■□□□ 1.03
ACTN4-210ENST00000588618 IDO1P14902 403 aa21.5■■□□□ 1.03
ACTN4-210ENST00000588618 ALOX12P18054 663 aa21.5■■□□□ 1.03
ACTN4-210ENST00000588618 TIA1P31483 386 aaKnown RBP eCLIP21.5■■□□□ 1.031e-7■□□□□ 10.3
ACTN4-210ENST00000588618 CLDN6P56747 220 aa21.5■■□□□ 1.03
ACTN4-210ENST00000588618 UBAP2LQ14157 1087 aaKnown RBP21.5■■□□□ 1.03
ACTN4-210ENST00000588618 MUM1Q2TAK8 710 aa21.5■■□□□ 1.03
ACTN4-210ENST00000588618 CCNYL2Q5T2Q4 361 aa21.5■■□□□ 1.03
ACTN4-210ENST00000588618 NOXRED1Q6NXP6 359 aa21.5■■□□□ 1.03
ACTN4-210ENST00000588618 CYP20A1Q6UW02 462 aa21.5■■□□□ 1.03
ACTN4-210ENST00000588618 BPHLQ86WA6 291 aaPredicted RBP21.5■■□□□ 1.03
ACTN4-210ENST00000588618 NDC1Q9BTX1 674 aa21.5■■□□□ 1.03
ACTN4-210ENST00000588618 EBPLQ9BY08 206 aa21.5■■□□□ 1.03
ACTN4-210ENST00000588618 ANKHQ9HCJ1 492 aa21.5■■□□□ 1.03
ACTN4-210ENST00000588618 OCIAD1Q9NX40 245 aa21.5■■□□□ 1.03
ACTN4-210ENST00000588618 MRPS2Q9Y399 296 aaKnown RBP21.5■■□□□ 1.03
ACTN4-210ENST00000588618 SLC22A7Q9Y694 548 aa21.5■■□□□ 1.03
ACTN4-210ENST00000588618 H3BMH7 237 aa21.49■■□□□ 1.03
ACTN4-210ENST00000588618 BTN3A2P78410 334 aa21.49■■□□□ 1.03
ACTN4-210ENST00000588618 IL11RAQ14626 422 aa21.49■■□□□ 1.03
ACTN4-210ENST00000588618 GSTA3Q16772 222 aa21.49■■□□□ 1.03
ACTN4-210ENST00000588618 DEFB134Q4QY38 66 aa21.49■■□□□ 1.03
ACTN4-210ENST00000588618 NIPAL1Q6NVV3 410 aa21.49■■□□□ 1.03
ACTN4-210ENST00000588618 PPP1R3BQ86XI6 285 aa21.49■■□□□ 1.03
ACTN4-210ENST00000588618 ARHGEF39Q8N4T4 335 aa21.49■■□□□ 1.03
ACTN4-210ENST00000588618 FITM2Q8N6M3 262 aa21.49■■□□□ 1.03
ACTN4-210ENST00000588618 AMER3Q8N944 861 aa21.49■■□□□ 1.03
ACTN4-210ENST00000588618 AIG1Q9NVV5 245 aa21.49■■□□□ 1.03
ACTN4-210ENST00000588618 SIDT1Q9NXL6 827 aaKnown RBP21.49■■□□□ 1.03
ACTN4-210ENST00000588618 ARMCX1Q9P291 453 aa21.49■■□□□ 1.03
ACTN4-210ENST00000588618 ADAM29Q9UKF5 820 aa21.49■■□□□ 1.03
ACTN4-210ENST00000588618 LOXL2Q9Y4K0 774 aa21.49■■□□□ 1.03
ACTN4-210ENST00000588618 COPG1Q9Y678 874 aaKnown RBP21.49■■□□□ 1.03
ACTN4-210ENST00000588618 FITM1A5D6W6 292 aa21.49■■□□□ 1.03
ACTN4-210ENST00000588618 POLR1CO15160 346 aaPredicted RBP21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms