RNA–Protein interactions for RNA: ENST00000587256.1

ATG4D-207, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-207ENST00000587256 IL10P22301 178 aa13.99□□□□□ -0.17
ATG4D-207ENST00000587256 JAK1P23458 1154 aa13.99□□□□□ -0.17
ATG4D-207ENST00000587256 GCAP28676 217 aa13.99□□□□□ -0.17
ATG4D-207ENST00000587256 TNFRSF8P28908 595 aa13.99□□□□□ -0.17
ATG4D-207ENST00000587256 HNRNPH1P31943 449 aaKnown RBP13.99□□□□□ -0.17
ATG4D-207ENST00000587256 ARL1P40616 181 aaPredicted RBP13.99□□□□□ -0.17
ATG4D-207ENST00000587256 SOX8P57073 446 aa13.99□□□□□ -0.17
ATG4D-207ENST00000587256 TLE1Q04724 770 aa13.99□□□□□ -0.17
ATG4D-207ENST00000587256 TBCCQ15814 346 aa13.99□□□□□ -0.17
ATG4D-207ENST00000587256 NADK2Q4G0N4 442 aa13.99□□□□□ -0.17
ATG4D-207ENST00000587256 ADNP2Q6IQ32 1131 aa13.99□□□□□ -0.17
ATG4D-207ENST00000587256 TRIM40Q6P9F5 258 aa13.99□□□□□ -0.17
ATG4D-207ENST00000587256 LANCL3Q6ZV70 420 aa13.99□□□□□ -0.17
ATG4D-207ENST00000587256 SHISA5Q8N114 240 aa13.99□□□□□ -0.17
ATG4D-207ENST00000587256 PTGR2Q8N8N7 351 aaPredicted RBP13.99□□□□□ -0.17
ATG4D-207ENST00000587256 UBE2E3Q969T4 207 aa13.99□□□□□ -0.17
ATG4D-207ENST00000587256 TBC1D20Q96BZ9 403 aa13.99□□□□□ -0.17
ATG4D-207ENST00000587256 CCDC77Q9BR77 488 aa13.99□□□□□ -0.17
ATG4D-207ENST00000587256 LHPPQ9H008 270 aa13.99□□□□□ -0.17
ATG4D-207ENST00000587256 RHBGQ9H310 441 aa13.99□□□□□ -0.17
ATG4D-207ENST00000587256 ZNF552Q9H707 407 aaPredicted RBP13.99□□□□□ -0.17
ATG4D-207ENST00000587256 ACTR8Q9H981 624 aa13.99□□□□□ -0.17
ATG4D-207ENST00000587256 COPS7BQ9H9Q2 264 aaPredicted RBP13.99□□□□□ -0.17
ATG4D-207ENST00000587256 C5AR2Q9P296 337 aa13.99□□□□□ -0.17
ATG4D-207ENST00000587256 TMCO1Q9UM00 188 aa13.99□□□□□ -0.17
ATG4D-207ENST00000587256 TNPO3Q9Y5L0 923 aaKnown RBP13.99□□□□□ -0.17
ATG4D-207ENST00000587256 HELZ2Q9BYK8 2649 aaKnown RBP13.99□□□□□ -0.17
ATG4D-207ENST00000587256 SCN3AQ9NY46 2000 aa13.98□□□□□ -0.17
ATG4D-207ENST00000587256 LOC102723996A0A087X1L8 192 aa13.98□□□□□ -0.17
ATG4D-207ENST00000587256 A0A1W2PQ72 361 aa13.98□□□□□ -0.17
ATG4D-207ENST00000587256 LRRC14BA6NHZ5 514 aa13.98□□□□□ -0.17
ATG4D-207ENST00000587256 KLK8O60259 260 aa13.98□□□□□ -0.17
ATG4D-207ENST00000587256 RNH1P13489 461 aaKnown RBP13.98□□□□□ -0.17
ATG4D-207ENST00000587256 PIK3CGP48736 1102 aa13.98□□□□□ -0.17
ATG4D-207ENST00000587256 EFNA3P52797 238 aa13.98□□□□□ -0.17
ATG4D-207ENST00000587256 PLA2G16P53816 162 aa13.98□□□□□ -0.17
ATG4D-207ENST00000587256 BTN3A2P78410 334 aa13.98□□□□□ -0.17
ATG4D-207ENST00000587256 TGM3Q08188 693 aa13.98□□□□□ -0.17
ATG4D-207ENST00000587256 ABRAXAS2Q15018 415 aa13.98□□□□□ -0.17
ATG4D-207ENST00000587256 PCOLCEQ15113 449 aa13.98□□□□□ -0.17
ATG4D-207ENST00000587256 PCBP2Q15366 365 aaKnown RBP eCLIP13.98□□□□□ -0.17
ATG4D-207ENST00000587256 AGAP7PQ5VUJ5 663 aa13.98□□□□□ -0.17
ATG4D-207ENST00000587256 GRHL2Q6ISB3 625 aa13.98□□□□□ -0.17
ATG4D-207ENST00000587256 MED27Q6P2C8 311 aa13.98□□□□□ -0.17
ATG4D-207ENST00000587256 ADGRD1Q6QNK2 874 aa13.98□□□□□ -0.17
ATG4D-207ENST00000587256 TMEM205Q6UW68 189 aa13.98□□□□□ -0.17
ATG4D-207ENST00000587256 GOLGA7Q7Z5G4 137 aa13.98□□□□□ -0.17
ATG4D-207ENST00000587256 VN1R5Q7Z5H4 357 aa13.98□□□□□ -0.17
ATG4D-207ENST00000587256 KBTBD2Q8IY47 623 aa13.98□□□□□ -0.17
ATG4D-207ENST00000587256 MS4A6EQ96DS6 147 aa13.98□□□□□ -0.17
ATG4D-207ENST00000587256 AGAP4Q96P64 663 aa13.98□□□□□ -0.17
ATG4D-207ENST00000587256 MRPL57Q9BQC6 102 aaKnown RBP13.98□□□□□ -0.17
ATG4D-207ENST00000587256 MFRPQ9BY79 579 aa13.98□□□□□ -0.17
ATG4D-207ENST00000587256 REXO4Q9GZR2 422 aaKnown RBP13.98□□□□□ -0.17
ATG4D-207ENST00000587256 AICDAQ9GZX7 198 aa13.98□□□□□ -0.17
ATG4D-207ENST00000587256 ZNF700Q9H0M5 742 aa13.98□□□□□ -0.17
ATG4D-207ENST00000587256 MRPL46Q9H2W6 279 aaKnown RBP13.98□□□□□ -0.17
ATG4D-207ENST00000587256 EPB41L4BQ9H329 900 aa13.98□□□□□ -0.17
ATG4D-207ENST00000587256 FETUBQ9UGM5 382 aa13.98□□□□□ -0.17
ATG4D-207ENST00000587256 IGHV3-20A0A0C4DH32 117 aa13.97□□□□□ -0.17
ATG4D-207ENST00000587256 LRIT2A6NDA9 550 aa13.97□□□□□ -0.17
ATG4D-207ENST00000587256 OR2W5A6NFC9 320 aa13.97□□□□□ -0.17
ATG4D-207ENST00000587256 ZNF500O60304 480 aaPredicted RBP13.97□□□□□ -0.17
ATG4D-207ENST00000587256 B4GALT2O60909 372 aa13.97□□□□□ -0.17
ATG4D-207ENST00000587256 WFS1O76024 890 aa13.97□□□□□ -0.17
ATG4D-207ENST00000587256 SEC24DO94855 1032 aaPredicted RBP13.97□□□□□ -0.17
ATG4D-207ENST00000587256 SIX3O95343 332 aaPredicted RBP13.97□□□□□ -0.17
ATG4D-207ENST00000587256 EEF1DP29692 281 aaKnown RBP13.97□□□□□ -0.17
ATG4D-207ENST00000587256 SERPINB1P30740 379 aa13.97□□□□□ -0.17
ATG4D-207ENST00000587256 CASP2P42575 452 aa13.97□□□□□ -0.17
ATG4D-207ENST00000587256 Q0VFX4 171 aa13.97□□□□□ -0.17
ATG4D-207ENST00000587256 DDX39BQ13838 428 aaKnown RBP13.97□□□□□ -0.17
ATG4D-207ENST00000587256 GTF2H2Q13888 395 aa13.97□□□□□ -0.17
ATG4D-207ENST00000587256 GTF2H2CQ6P1K8 395 aa13.97□□□□□ -0.17
ATG4D-207ENST00000587256 CA13Q8N1Q1 262 aa13.97□□□□□ -0.17
ATG4D-207ENST00000587256 OR2L5Q8NG80 312 aa13.97□□□□□ -0.17
ATG4D-207ENST00000587256 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.97□□□□□ -0.17
ATG4D-207ENST00000587256 TSLPQ969D9 159 aa13.97□□□□□ -0.17
ATG4D-207ENST00000587256 PHF21BQ96EK2 531 aa13.97□□□□□ -0.17
ATG4D-207ENST00000587256 TUBB6Q9BUF5 446 aa13.97□□□□□ -0.17
ATG4D-207ENST00000587256 EPS8L2Q9H6S3 715 aa13.97□□□□□ -0.17
ATG4D-207ENST00000587256 ANKZF1Q9H8Y5 726 aa13.97□□□□□ -0.17
ATG4D-207ENST00000587256 CLK4Q9HAZ1 481 aaKnown RBP13.97□□□□□ -0.17
ATG4D-207ENST00000587256 LANCL2Q9NS86 450 aa13.97□□□□□ -0.17
ATG4D-207ENST00000587256 LUZP4Q9P127 313 aa13.97□□□□□ -0.17
ATG4D-207ENST00000587256 TBK1Q9UHD2 729 aa13.97□□□□□ -0.17
ATG4D-207ENST00000587256 ZNF490Q9ULM2 529 aaPredicted RBP13.97□□□□□ -0.17
ATG4D-207ENST00000587256 SMIM23A6NLE4 172 aa13.96□□□□□ -0.17
ATG4D-207ENST00000587256 MAGEB17A8MXT2 336 aa13.96□□□□□ -0.17
ATG4D-207ENST00000587256 B3GALT2O43825 422 aa13.96□□□□□ -0.17
ATG4D-207ENST00000587256 DNAJB6O75190 326 aa13.96□□□□□ -0.17
ATG4D-207ENST00000587256 SERPINA7P05543 415 aa13.96□□□□□ -0.17
ATG4D-207ENST00000587256 PRR35P0CG20 571 aa13.96□□□□□ -0.17
ATG4D-207ENST00000587256 SMIM10L1P0DMW3 83 aa13.96□□□□□ -0.17
ATG4D-207ENST00000587256 AP2B1P63010 937 aa13.96□□□□□ -0.17
ATG4D-207ENST00000587256 PHEXP78562 749 aa13.96□□□□□ -0.17
ATG4D-207ENST00000587256 RHAGQ02094 409 aa13.96□□□□□ -0.17
ATG4D-207ENST00000587256 E2F2Q14209 437 aa13.96□□□□□ -0.17
ATG4D-207ENST00000587256 NSDHLQ15738 373 aa13.96□□□□□ -0.17
ATG4D-207ENST00000587256 ADPRMQ3LIE5 342 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms