RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 KLK1P06870 262 aa5.91□□□□□ -1.46
LIG3-206ENST00000586058 TDGF1P13385 188 aa5.91□□□□□ -1.46
LIG3-206ENST00000586058 GLB1P16278 677 aa5.91□□□□□ -1.46
LIG3-206ENST00000586058 TYRP1P17643 537 aa5.91□□□□□ -1.46
LIG3-206ENST00000586058 CAPN3P20807 821 aa5.91□□□□□ -1.46
LIG3-206ENST00000586058 ALDH4A1P30038 563 aa5.91□□□□□ -1.46
LIG3-206ENST00000586058 PEBP1P30086 187 aaKnown RBP5.91□□□□□ -1.46
LIG3-206ENST00000586058 SOAT1P35610 550 aa5.91□□□□□ -1.46
LIG3-206ENST00000586058 BCL6P41182 706 aa5.91□□□□□ -1.46
LIG3-206ENST00000586058 GRIA3P42263 894 aa5.91□□□□□ -1.46
LIG3-206ENST00000586058 GPR3P46089 330 aa5.91□□□□□ -1.46
LIG3-206ENST00000586058 ALDH9A1P49189 494 aa5.91□□□□□ -1.46
LIG3-206ENST00000586058 ANXA11P50995 505 aaKnown RBP5.91□□□□□ -1.46
LIG3-206ENST00000586058 SLC7A2P52569 658 aa5.91□□□□□ -1.46
LIG3-206ENST00000586058 AP2B1P63010 937 aa5.91□□□□□ -1.46
LIG3-206ENST00000586058 RELAQ04206 551 aa5.91□□□□□ -1.46
LIG3-206ENST00000586058 KLC1Q07866 573 aa5.91□□□□□ -1.46
LIG3-206ENST00000586058 C2orf80Q0P641 193 aa5.91□□□□□ -1.46
LIG3-206ENST00000586058 SPIDRQ14159 915 aa5.91□□□□□ -1.46
LIG3-206ENST00000586058 SNCBQ16143 134 aa5.91□□□□□ -1.46
LIG3-206ENST00000586058 ZNF423Q2M1K9 1284 aa5.91□□□□□ -1.46
LIG3-206ENST00000586058 TRIM61Q5EBN2 209 aa5.91□□□□□ -1.46
LIG3-206ENST00000586058 SPANXN4Q5MJ08 99 aa5.91□□□□□ -1.46
LIG3-206ENST00000586058 MANEAQ5SRI9 462 aa5.91□□□□□ -1.46
LIG3-206ENST00000586058 CHCHD2P9Q5T1J5 151 aaPredicted RBP5.91□□□□□ -1.46
LIG3-206ENST00000586058 DEPDC1Q5TB30 811 aa5.91□□□□□ -1.46
LIG3-206ENST00000586058 PEAR1Q5VY43 1037 aaPredicted RBP5.91□□□□□ -1.46
LIG3-206ENST00000586058 OR4C11Q6IEV9 310 aa5.91□□□□□ -1.46
LIG3-206ENST00000586058 ZNF425Q6IV72 752 aa5.91□□□□□ -1.46
LIG3-206ENST00000586058 GALNT18Q6P9A2 607 aa5.91□□□□□ -1.46
LIG3-206ENST00000586058 DNAJC14Q6Y2X3 702 aaPredicted RBP5.91□□□□□ -1.46
LIG3-206ENST00000586058 RIPOR1Q6ZS17 1223 aa5.91□□□□□ -1.46
LIG3-206ENST00000586058 RNF44Q7L0R7 432 aa5.91□□□□□ -1.46
LIG3-206ENST00000586058 BMP8AQ7Z5Y6 402 aa5.91□□□□□ -1.46
LIG3-206ENST00000586058 PAQR7Q86WK9 346 aa5.91□□□□□ -1.46
LIG3-206ENST00000586058 ZNF761Q86XN6 746 aaPredicted RBP5.91□□□□□ -1.46
LIG3-206ENST00000586058 SAMD14Q8IZD0 417 aaPredicted RBP5.91□□□□□ -1.46
LIG3-206ENST00000586058 FBXW8Q8N3Y1 598 aa5.91□□□□□ -1.46
LIG3-206ENST00000586058 MINDY1Q8N5J2 469 aa5.91□□□□□ -1.46
LIG3-206ENST00000586058 ZNF740Q8NDX6 193 aa5.91□□□□□ -1.46
LIG3-206ENST00000586058 C1orf216Q8TAB5 229 aa5.91□□□□□ -1.46
LIG3-206ENST00000586058 BAHD1Q8TBE0 780 aaPredicted RBP5.91□□□□□ -1.46
LIG3-206ENST00000586058 ZCCHC10Q8TBK6 192 aa5.91□□□□□ -1.46
LIG3-206ENST00000586058 NT5CQ8TCD5 201 aa5.91□□□□□ -1.46
LIG3-206ENST00000586058 ADAMTS18Q8TE60 1221 aa5.91□□□□□ -1.46
LIG3-206ENST00000586058 CHTF18Q8WVB6 975 aa5.91□□□□□ -1.46
LIG3-206ENST00000586058 RSC1A1Q92681 617 aa5.91□□□□□ -1.46
LIG3-206ENST00000586058 POP5Q969H6 163 aaKnown RBP5.91□□□□□ -1.46
LIG3-206ENST00000586058 GFM2Q969S9 779 aaKnown RBP5.91□□□□□ -1.46
LIG3-206ENST00000586058 VPS33AQ96AX1 596 aa5.91□□□□□ -1.46
LIG3-206ENST00000586058 LRRC58Q96CX6 371 aa5.91□□□□□ -1.46
LIG3-206ENST00000586058 TCTN2Q96GX1 697 aa5.91□□□□□ -1.46
LIG3-206ENST00000586058 LOXL4Q96JB6 756 aa5.91□□□□□ -1.46
LIG3-206ENST00000586058 FCRL1Q96LA6 429 aa5.91□□□□□ -1.46
LIG3-206ENST00000586058 OR2A14Q96R47 310 aa5.91□□□□□ -1.46
LIG3-206ENST00000586058 CDRT15Q96T59 188 aa5.91□□□□□ -1.46
LIG3-206ENST00000586058 DPYSL5Q9BPU6 564 aa5.91□□□□□ -1.46
LIG3-206ENST00000586058 ECSITQ9BQ95 431 aa5.91□□□□□ -1.46
LIG3-206ENST00000586058 C17orf62Q9BQA9 187 aa5.91□□□□□ -1.46
LIG3-206ENST00000586058 EFHD1Q9BUP0 239 aa5.91□□□□□ -1.46
LIG3-206ENST00000586058 DUSP26Q9BV47 211 aa5.91□□□□□ -1.46
LIG3-206ENST00000586058 SARGQ9BW04 601 aa5.91□□□□□ -1.46
LIG3-206ENST00000586058 GTPBP2Q9BX10 602 aaKnown RBP5.91□□□□□ -1.46
LIG3-206ENST00000586058 CADM1Q9BY67 442 aaKnown RBP5.91□□□□□ -1.46
LIG3-206ENST00000586058 BHLHE41Q9C0J9 482 aaPredicted RBP5.91□□□□□ -1.46
LIG3-206ENST00000586058 SLC7A5P2Q9GIP4 190 aa5.91□□□□□ -1.46
LIG3-206ENST00000586058 SPNS1Q9H2V7 528 aa5.91□□□□□ -1.46
LIG3-206ENST00000586058 ALG2Q9H553 416 aa5.91□□□□□ -1.46
LIG3-206ENST00000586058 REEP4Q9H6H4 257 aa5.91□□□□□ -1.46
LIG3-206ENST00000586058 GAREM1Q9H706 876 aa5.91□□□□□ -1.46
LIG3-206ENST00000586058 NEUROD4Q9HD90 331 aa5.91□□□□□ -1.46
LIG3-206ENST00000586058 PDE7BQ9NP56 450 aa5.91□□□□□ -1.46
LIG3-206ENST00000586058 MS4A12Q9NXJ0 267 aa5.91□□□□□ -1.46
LIG3-206ENST00000586058 SH3BP4Q9P0V3 963 aa5.91□□□□□ -1.46
LIG3-206ENST00000586058 LRIT1Q9P2V4 623 aa5.91□□□□□ -1.46
LIG3-206ENST00000586058 SUCOQ9UBS9 1254 aaKnown RBP5.91□□□□□ -1.46
LIG3-206ENST00000586058 BAIAP2L1Q9UHR4 511 aa5.91□□□□□ -1.46
LIG3-206ENST00000586058 ANGPTL2Q9UKU9 493 aa5.91□□□□□ -1.46
LIG3-206ENST00000586058 PSME2Q9UL46 239 aa5.91□□□□□ -1.46
LIG3-206ENST00000586058 VPS4AQ9UN37 437 aa5.91□□□□□ -1.46
LIG3-206ENST00000586058 CLCA2Q9UQC9 943 aa5.91□□□□□ -1.46
LIG3-206ENST00000586058 MRPS33Q9Y291 106 aaKnown RBP5.91□□□□□ -1.46
LIG3-206ENST00000586058 DLGAP4Q9Y2H0 992 aa5.91□□□□□ -1.46
LIG3-206ENST00000586058 CCL27Q9Y4X3 112 aa5.91□□□□□ -1.46
LIG3-206ENST00000586058 PCDHGA5Q9Y5G8 931 aa5.91□□□□□ -1.46
LIG3-206ENST00000586058 CCDC88CQ9P219 2028 aa5.91□□□□□ -1.46
LIG3-206ENST00000586058 A0A096LPI6 279 aa5.9□□□□□ -1.46
LIG3-206ENST00000586058 PRAMEF33A0A0G2JMD5 474 aa5.9□□□□□ -1.46
LIG3-206ENST00000586058 C1orf226A1L170 272 aa5.9□□□□□ -1.46
LIG3-206ENST00000586058 C9JVG2 144 aa5.9□□□□□ -1.46
LIG3-206ENST00000586058 PLPP1O14494 284 aa5.9□□□□□ -1.46
LIG3-206ENST00000586058 KHNYNO15037 678 aaKnown RBP5.9□□□□□ -1.46
LIG3-206ENST00000586058 GPR37O15354 613 aa5.9□□□□□ -1.46
LIG3-206ENST00000586058 PDPK1O15530 556 aa5.9□□□□□ -1.46
LIG3-206ENST00000586058 TNFSF14O43557 240 aa5.9□□□□□ -1.46
LIG3-206ENST00000586058 PRICKLE3O43900 615 aaPredicted RBP5.9□□□□□ -1.46
LIG3-206ENST00000586058 NOBOXO60393 691 aa5.9□□□□□ -1.46
LIG3-206ENST00000586058 PRAMEF4O60810 478 aa5.9□□□□□ -1.46
LIG3-206ENST00000586058 PDE5AO76074 875 aa5.9□□□□□ -1.46
LIG3-206ENST00000586058 ZBTB11O95625 1053 aaPredicted RBP5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms