RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 VWA5B1Q5TIE3 1220 aa17.41■□□□□ 0.38
RFFL-211ENST00000584541 PWWP2BQ6NUJ5 590 aa17.41■□□□□ 0.38
RFFL-211ENST00000584541 EPGNQ6UW88 154 aa17.41■□□□□ 0.38
RFFL-211ENST00000584541 Q6ZSR9 355 aa17.41■□□□□ 0.38
RFFL-211ENST00000584541 OR2T11Q8NH01 316 aa17.41■□□□□ 0.38
RFFL-211ENST00000584541 C3orf30Q96M34 536 aa17.41■□□□□ 0.38
RFFL-211ENST00000584541 QRFPRQ96P65 431 aa17.41■□□□□ 0.38
RFFL-211ENST00000584541 C17orf62Q9BQA9 187 aa17.41■□□□□ 0.38
RFFL-211ENST00000584541 MRPL1Q9BYD6 325 aaKnown RBP17.41■□□□□ 0.38
RFFL-211ENST00000584541 ACTR5Q9H9F9 607 aaPredicted RBP17.41■□□□□ 0.38
RFFL-211ENST00000584541 KLHL14Q9P2G3 628 aa17.41■□□□□ 0.38
RFFL-211ENST00000584541 NDOR1Q9UHB4 597 aa17.41■□□□□ 0.38
RFFL-211ENST00000584541 DCTN4Q9UJW0 460 aa17.41■□□□□ 0.38
RFFL-211ENST00000584541 CCL27Q9Y4X3 112 aa17.41■□□□□ 0.38
RFFL-211ENST00000584541 PCDHGA8Q9Y5G5 932 aa17.41■□□□□ 0.38
RFFL-211ENST00000584541 SPTBP11277 2137 aa17.41■□□□□ 0.38
RFFL-211ENST00000584541 ARHGAP10A1A4S6 786 aa17.4■□□□□ 0.38
RFFL-211ENST00000584541 NPIPB8E9PQR5 432 aa17.4■□□□□ 0.38
RFFL-211ENST00000584541 PLPP1O14494 284 aa17.4■□□□□ 0.38
RFFL-211ENST00000584541 SDHDO14521 159 aa17.4■□□□□ 0.38
RFFL-211ENST00000584541 ZNF195O14628 629 aa17.4■□□□□ 0.38
RFFL-211ENST00000584541 LSM1O15116 133 aaKnown RBP17.4■□□□□ 0.38
RFFL-211ENST00000584541 PEX11AO75192 247 aa17.4■□□□□ 0.38
RFFL-211ENST00000584541 ALAS2P22557 587 aa17.4■□□□□ 0.38
RFFL-211ENST00000584541 ETV5P41161 510 aa17.4■□□□□ 0.38
RFFL-211ENST00000584541 AVPR1BP47901 424 aa17.4■□□□□ 0.38
RFFL-211ENST00000584541 ID4P47928 161 aa17.4■□□□□ 0.38
RFFL-211ENST00000584541 MAD2L1Q13257 205 aaPredicted RBP17.4■□□□□ 0.38
RFFL-211ENST00000584541 NXNQ6DKJ4 435 aa17.4■□□□□ 0.38
RFFL-211ENST00000584541 OR4C11Q6IEV9 310 aa17.4■□□□□ 0.38
RFFL-211ENST00000584541 ABHD17CQ6PCB6 329 aa17.4■□□□□ 0.38
RFFL-211ENST00000584541 TTLL10Q6ZVT0 673 aa17.4■□□□□ 0.38
RFFL-211ENST00000584541 DGLUCYQ7Z3D6 616 aa17.4■□□□□ 0.38
RFFL-211ENST00000584541 MAVSQ7Z434 540 aa17.4■□□□□ 0.38
RFFL-211ENST00000584541 NUDT13Q86X67 352 aa17.4■□□□□ 0.38
RFFL-211ENST00000584541 METTL4Q8N3J2 472 aa17.4■□□□□ 0.38
RFFL-211ENST00000584541 RFWD2Q8NHY2 731 aa17.4■□□□□ 0.38
RFFL-211ENST00000584541 CLIP3Q96DZ5 547 aa17.4■□□□□ 0.38
RFFL-211ENST00000584541 MVB12AQ96EY5 273 aa17.4■□□□□ 0.38
RFFL-211ENST00000584541 C10orf90Q96M02 699 aa17.4■□□□□ 0.38
RFFL-211ENST00000584541 AICDAQ9GZX7 198 aa17.4■□□□□ 0.38
RFFL-211ENST00000584541 AKTIPQ9H8T0 292 aa17.4■□□□□ 0.38
RFFL-211ENST00000584541 POLR1BQ9H9Y6 1135 aa17.4■□□□□ 0.38
RFFL-211ENST00000584541 CDC14AQ9UNH5 594 aa17.4■□□□□ 0.38
RFFL-211ENST00000584541 TMED5Q9Y3A6 229 aa17.4■□□□□ 0.38
RFFL-211ENST00000584541 DMXL1Q9Y485 3027 aa17.39■□□□□ 0.37
RFFL-211ENST00000584541 A0A0G2JND7 137 aa17.39■□□□□ 0.37
RFFL-211ENST00000584541 GOLGA8QA0A0J9YX86 632 aa17.39■□□□□ 0.37
RFFL-211ENST00000584541 GOLGA8OA6NCC3 632 aa17.39■□□□□ 0.37
RFFL-211ENST00000584541 GOLGA8NF8WBI6 632 aa17.39■□□□□ 0.37
RFFL-211ENST00000584541 DSCR3O14972 297 aa17.39■□□□□ 0.37
RFFL-211ENST00000584541 CPNE3O75131 537 aaKnown RBP17.39■□□□□ 0.37
RFFL-211ENST00000584541 SMIM10L1P0DMW3 83 aa17.39■□□□□ 0.37
RFFL-211ENST00000584541 LBPP18428 481 aa17.39■□□□□ 0.37
RFFL-211ENST00000584541 IL1RNP18510 177 aa17.39■□□□□ 0.37
RFFL-211ENST00000584541 DRD4P21917 467 aa17.39■□□□□ 0.37
RFFL-211ENST00000584541 MAPK1P28482 360 aa17.39■□□□□ 0.37
RFFL-211ENST00000584541 EPHA3P29320 983 aa17.39■□□□□ 0.37
RFFL-211ENST00000584541 IDH3AP50213 366 aa17.39■□□□□ 0.37
RFFL-211ENST00000584541 MTTPP55157 894 aa17.39■□□□□ 0.37
RFFL-211ENST00000584541 RPL38P63173 70 aaKnown RBP17.39■□□□□ 0.37
RFFL-211ENST00000584541 GABREP78334 506 aa17.39■□□□□ 0.37
RFFL-211ENST00000584541 BTN3A2P78410 334 aa17.39■□□□□ 0.37
RFFL-211ENST00000584541 TBL3Q12788 808 aaKnown RBP17.39■□□□□ 0.37
RFFL-211ENST00000584541 FOXC1Q12948 553 aa17.39■□□□□ 0.37
RFFL-211ENST00000584541 SMU1Q2TAY7 513 aa17.39■□□□□ 0.37
RFFL-211ENST00000584541 DEFB134Q4QY38 66 aa17.39■□□□□ 0.37
RFFL-211ENST00000584541 SLC9B1Q4ZJI4 515 aa17.39■□□□□ 0.37
RFFL-211ENST00000584541 RHBDD2Q6NTF9 364 aa17.39■□□□□ 0.37
RFFL-211ENST00000584541 COMMD6Q7Z4G1 85 aa17.39■□□□□ 0.37
RFFL-211ENST00000584541 ZFAND4Q86XD8 727 aa17.39■□□□□ 0.37
RFFL-211ENST00000584541 ARHGEF39Q8N4T4 335 aa17.39■□□□□ 0.37
RFFL-211ENST00000584541 C1orf52Q8N6N3 182 aaKnown RBP17.39■□□□□ 0.37
RFFL-211ENST00000584541 FNDC5Q8NAU1 212 aa17.39■□□□□ 0.37
RFFL-211ENST00000584541 CEP70Q8NHQ1 597 aa17.39■□□□□ 0.37
RFFL-211ENST00000584541 ACTRT2Q8TDY3 377 aa17.39■□□□□ 0.37
RFFL-211ENST00000584541 CHTF18Q8WVB6 975 aa17.39■□□□□ 0.37
RFFL-211ENST00000584541 STON2Q8WXE9 905 aa17.39■□□□□ 0.37
RFFL-211ENST00000584541 APIPQ96GX9 242 aa17.39■□□□□ 0.37
RFFL-211ENST00000584541 SMIM10Q96HG1 83 aa17.39■□□□□ 0.37
RFFL-211ENST00000584541 MAELQ96JY0 434 aaKnown RBP17.39■□□□□ 0.37
RFFL-211ENST00000584541 RILPQ96NA2 401 aa17.39■□□□□ 0.37
RFFL-211ENST00000584541 B3GNT4Q9C0J1 378 aa17.39■□□□□ 0.37
RFFL-211ENST00000584541 WDR55Q9H6Y2 383 aaPredicted RBP17.39■□□□□ 0.37
RFFL-211ENST00000584541 TCF7L2Q9NQB0 619 aa17.39■□□□□ 0.37
RFFL-211ENST00000584541 ADAM29Q9UKF5 820 aa17.39■□□□□ 0.37
RFFL-211ENST00000584541 MRPS2Q9Y399 296 aaKnown RBP17.39■□□□□ 0.37
RFFL-211ENST00000584541 PCDHGA3Q9Y5H0 932 aa17.39■□□□□ 0.37
RFFL-211ENST00000584541 CNOT1A5YKK6 2376 aaKnown RBP17.38■□□□□ 0.37
RFFL-211ENST00000584541 A0A0G2JN53 185 aa17.38■□□□□ 0.37
RFFL-211ENST00000584541 A0A1B0GX78 115 aa17.38■□□□□ 0.37
RFFL-211ENST00000584541 RTCAO00442 366 aaKnown RBP17.38■□□□□ 0.37
RFFL-211ENST00000584541 B3GALT2O43825 422 aa17.38■□□□□ 0.37
RFFL-211ENST00000584541 KLHL18O94889 574 aa17.38■□□□□ 0.37
RFFL-211ENST00000584541 TNFSF15O95150 251 aa17.38■□□□□ 0.37
RFFL-211ENST00000584541 TIAF1O95411 115 aa17.38■□□□□ 0.37
RFFL-211ENST00000584541 NSA2O95478 260 aaKnown RBP17.38■□□□□ 0.37
RFFL-211ENST00000584541 RBMS1P29558 406 aaKnown RBP17.38■□□□□ 0.37
RFFL-211ENST00000584541 BSGP35613 385 aa17.38■□□□□ 0.37
RFFL-211ENST00000584541 GCGRP47871 477 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms