RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 MAPK12P53778 367 aa8.89□□□□□ -0.99
SS18-220ENST00000582092 C21orf59P57076 290 aa8.89□□□□□ -0.99
SS18-220ENST00000582092 MTPNP58546 118 aa8.89□□□□□ -0.99
SS18-220ENST00000582092 REEP5Q00765 189 aa8.89□□□□□ -0.99
SS18-220ENST00000582092 CHRNB3Q05901 458 aa8.89□□□□□ -0.99
SS18-220ENST00000582092 RGS1Q08116 209 aa8.89□□□□□ -0.99
SS18-220ENST00000582092 E2F2Q14209 437 aa8.89□□□□□ -0.99
SS18-220ENST00000582092 KIR2DS3Q14952 304 aa8.89□□□□□ -0.99
SS18-220ENST00000582092 CYP51A1Q16850 503 aa8.89□□□□□ -0.99
SS18-220ENST00000582092 LRRC36Q1X8D7 754 aa8.89□□□□□ -0.99
SS18-220ENST00000582092 ALG11Q2TAA5 492 aa8.89□□□□□ -0.99
SS18-220ENST00000582092 FAM98BQ52LJ0 330 aaKnown RBP8.89□□□□□ -0.99
SS18-220ENST00000582092 TMEM35AQ53FP2 167 aa8.89□□□□□ -0.99
SS18-220ENST00000582092 RUNDC3AQ59EK9 446 aa8.89□□□□□ -0.99
SS18-220ENST00000582092 PRRT3Q5FWE3 981 aa8.89□□□□□ -0.99
SS18-220ENST00000582092 WLSQ5T9L3 541 aa8.89□□□□□ -0.99
SS18-220ENST00000582092 DEPDC1Q5TB30 811 aa8.89□□□□□ -0.99
SS18-220ENST00000582092 KHDRBS2Q5VWX1 349 aaKnown RBP8.89□□□□□ -0.99
SS18-220ENST00000582092 DLEU7Q6UYE1 221 aa8.89□□□□□ -0.99
SS18-220ENST00000582092 ABI3BPQ7Z7G0 1075 aa8.89□□□□□ -0.99
SS18-220ENST00000582092 SLC9B2Q86UD5 537 aa8.89□□□□□ -0.99
SS18-220ENST00000582092 ANKRD46Q86W74 232 aa8.89□□□□□ -0.99
SS18-220ENST00000582092 AVL9Q8NBF6 648 aa8.89□□□□□ -0.99
SS18-220ENST00000582092 TRPV3Q8NET8 790 aa8.89□□□□□ -0.99
SS18-220ENST00000582092 OR13H1Q8NG92 308 aa8.89□□□□□ -0.99
SS18-220ENST00000582092 OR8J2Q8NGG1 315 aa8.89□□□□□ -0.99
SS18-220ENST00000582092 OR4A15Q8NGL6 344 aa8.89□□□□□ -0.99
SS18-220ENST00000582092 OR10A6Q8NH74 314 aa8.89□□□□□ -0.99
SS18-220ENST00000582092 C16orf78Q8WTQ4 265 aa8.89□□□□□ -0.99
SS18-220ENST00000582092 ZFPM2Q8WW38 1151 aa8.89□□□□□ -0.99
SS18-220ENST00000582092 FIG4Q92562 907 aa8.89□□□□□ -0.99
SS18-220ENST00000582092 EME1Q96AY2 570 aa8.89□□□□□ -0.99
SS18-220ENST00000582092 MTERF3Q96E29 417 aa8.89□□□□□ -0.99
SS18-220ENST00000582092 PDXPQ96GD0 296 aa8.89□□□□□ -0.99
SS18-220ENST00000582092 EGLN2Q96KS0 407 aa8.89□□□□□ -0.99
SS18-220ENST00000582092 FCRL1Q96LA6 429 aa8.89□□□□□ -0.99
SS18-220ENST00000582092 ZNF184Q99676 751 aaPredicted RBP8.89□□□□□ -0.99
SS18-220ENST00000582092 UGT2B28Q9BY64 529 aa8.89□□□□□ -0.99
SS18-220ENST00000582092 REXO4Q9GZR2 422 aaKnown RBP8.89□□□□□ -0.99
SS18-220ENST00000582092 RHBGQ9H310 441 aa8.89□□□□□ -0.99
SS18-220ENST00000582092 RAD21L1Q9H4I0 556 aa8.89□□□□□ -0.99
SS18-220ENST00000582092 CUEDC1Q9NWM3 386 aaPredicted RBP8.89□□□□□ -0.99
SS18-220ENST00000582092 SIRT5Q9NXA8 310 aa8.89□□□□□ -0.99
SS18-220ENST00000582092 SLAMF8Q9P0V8 285 aa8.89□□□□□ -0.99
SS18-220ENST00000582092 ANAPC2Q9UJX6 822 aa8.89□□□□□ -0.99
SS18-220ENST00000582092 PPT2Q9UMR5 302 aa8.89□□□□□ -0.99
SS18-220ENST00000582092 SH2B3Q9UQQ2 575 aa8.89□□□□□ -0.99
SS18-220ENST00000582092 DTNAQ9Y4J8 743 aa8.89□□□□□ -0.99
SS18-220ENST00000582092 LRRC42Q9Y546 428 aa8.89□□□□□ -0.99
SS18-220ENST00000582092 PCDHB3Q9Y5E6 796 aa8.89□□□□□ -0.99
SS18-220ENST00000582092 DGKBQ9Y6T7 804 aa8.89□□□□□ -0.99
SS18-220ENST00000582092 PCDH15Q96QU1 1955 aa8.89□□□□□ -0.99
SS18-220ENST00000582092 TMEM131Q92545 1883 aa8.89□□□□□ -0.99
SS18-220ENST00000582092 PCM1Q15154 2024 aa8.88□□□□□ -0.99
SS18-220ENST00000582092 KIR2DS5A0A0G2JLQ3 304 aa8.88□□□□□ -0.99
SS18-220ENST00000582092 A0A0G2JNG1 304 aa8.88□□□□□ -0.99
SS18-220ENST00000582092 FEZF1A0PJY2 475 aa8.88□□□□□ -0.99
SS18-220ENST00000582092 GSAPA4D1B5 854 aa8.88□□□□□ -0.99
SS18-220ENST00000582092 URADA6NGE7 173 aa8.88□□□□□ -0.99
SS18-220ENST00000582092 GABRR3A8MPY1 467 aa8.88□□□□□ -0.99
SS18-220ENST00000582092 KIR2DS3K7RE56 304 aa8.88□□□□□ -0.99
SS18-220ENST00000582092 FXYD1O00168 92 aa8.88□□□□□ -0.99
SS18-220ENST00000582092 TM4SF5O14894 197 aa8.88□□□□□ -0.99
SS18-220ENST00000582092 CAPN5O15484 640 aaPredicted RBP8.88□□□□□ -0.99
SS18-220ENST00000582092 NDUFS4O43181 175 aa8.88□□□□□ -0.99
SS18-220ENST00000582092 PEX1O43933 1283 aa8.88□□□□□ -0.99
SS18-220ENST00000582092 SCELO95171 688 aa8.88□□□□□ -0.99
SS18-220ENST00000582092 KCNK5O95279 499 aa8.88□□□□□ -0.99
SS18-220ENST00000582092 GSNP06396 782 aa8.88□□□□□ -0.99
SS18-220ENST00000582092 C8BP07358 591 aa8.88□□□□□ -0.99
SS18-220ENST00000582092 CHRM5P08912 532 aaPredicted RBP8.88□□□□□ -0.99
SS18-220ENST00000582092 ZNF883P0CG24 379 aa8.88□□□□□ -0.99
SS18-220ENST00000582092 HOXB6P17509 224 aaKnown RBP8.88□□□□□ -0.99
SS18-220ENST00000582092 FASP25445 335 aa8.88□□□□□ -0.99
SS18-220ENST00000582092 CD38P28907 300 aa8.88□□□□□ -0.99
SS18-220ENST00000582092 SSR2P43308 183 aa8.88□□□□□ -0.99
SS18-220ENST00000582092 HSPA13P48723 471 aa8.88□□□□□ -0.99
SS18-220ENST00000582092 ALDH9A1P49189 494 aa8.88□□□□□ -0.99
SS18-220ENST00000582092 POLE2P56282 527 aa8.88□□□□□ -0.99
SS18-220ENST00000582092 C21orf58P58505 322 aa8.88□□□□□ -0.99
SS18-220ENST00000582092 TAS2R50P59544 299 aa8.88□□□□□ -0.99
SS18-220ENST00000582092 STXBP1P61764 594 aaKnown RBP8.88□□□□□ -0.99
SS18-220ENST00000582092 RACK1P63244 317 aaKnown RBP8.88□□□□□ -0.99
SS18-220ENST00000582092 CSNK1G2P78368 415 aa8.88□□□□□ -0.99
SS18-220ENST00000582092 KIR2DS5Q14953 304 aa8.88□□□□□ -0.99
SS18-220ENST00000582092 HEPACAMQ14CZ8 416 aa8.88□□□□□ -0.99
SS18-220ENST00000582092 INAVAQ3KP66 663 aa8.88□□□□□ -0.99
SS18-220ENST00000582092 LCN8Q6JVE9 175 aa8.88□□□□□ -0.99
SS18-220ENST00000582092 ERICH5Q6P6B1 374 aa8.88□□□□□ -0.99
SS18-220ENST00000582092 GALNT18Q6P9A2 607 aa8.88□□□□□ -0.99
SS18-220ENST00000582092 KLHL35Q6PF15 583 aa8.88□□□□□ -0.99
SS18-220ENST00000582092 XKR5Q6UX68 686 aa8.88□□□□□ -0.99
SS18-220ENST00000582092 ANGPTL8Q6UXH0 198 aa8.88□□□□□ -0.99
SS18-220ENST00000582092 IZUMO2Q6UXV1 221 aa8.88□□□□□ -0.99
SS18-220ENST00000582092 IKBIPQ70UQ0 350 aa8.88□□□□□ -0.99
SS18-220ENST00000582092 OOSP2Q86WS3 158 aa8.88□□□□□ -0.99
SS18-220ENST00000582092 NUDT13Q86X67 352 aa8.88□□□□□ -0.99
SS18-220ENST00000582092 GKN2Q86XP6 184 aa8.88□□□□□ -0.99
SS18-220ENST00000582092 FAM129CQ86XR2 697 aa8.88□□□□□ -0.99
SS18-220ENST00000582092 RIMKLAQ8IXN7 391 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms