RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 FIP1L1Q6UN15 594 aaKnown RBP4.04□□□□□ -1.76
SMCHD1-205ENST00000581383 MACC1Q6ZN28 852 aa4.04□□□□□ -1.76
SMCHD1-205ENST00000581383 C17orf107Q6ZR85 190 aa4.04□□□□□ -1.76
SMCHD1-205ENST00000581383 Q6ZRP5 223 aa4.04□□□□□ -1.76
SMCHD1-205ENST00000581383 RAPH1Q70E73 1250 aa4.04□□□□□ -1.76
SMCHD1-205ENST00000581383 TRMT11Q7Z4G4 463 aaKnown RBP4.04□□□□□ -1.76
SMCHD1-205ENST00000581383 ASPGQ86U10 573 aa4.04□□□□□ -1.76
SMCHD1-205ENST00000581383 ADAD2Q8NCV1 583 aaKnown RBP4.04□□□□□ -1.76
SMCHD1-205ENST00000581383 LPCAT1Q8NF37 534 aa4.04□□□□□ -1.76
SMCHD1-205ENST00000581383 OMA1Q96E52 524 aa4.04□□□□□ -1.76
SMCHD1-205ENST00000581383 CABS1Q96KC9 395 aa4.04□□□□□ -1.76
SMCHD1-205ENST00000581383 IL12RB2Q99665 862 aa4.04□□□□□ -1.76
SMCHD1-205ENST00000581383 SYT15Q9BQS2 421 aa4.04□□□□□ -1.76
SMCHD1-205ENST00000581383 MTIF3Q9H2K0 278 aaKnown RBP4.04□□□□□ -1.76
SMCHD1-205ENST00000581383 AKIRIN1Q9H9L7 192 aaPredicted RBP4.04□□□□□ -1.76
SMCHD1-205ENST00000581383 TMEM181Q9P2C4 612 aa4.04□□□□□ -1.76
SMCHD1-205ENST00000581383 FBXW2Q9UKT8 454 aa4.04□□□□□ -1.76
SMCHD1-205ENST00000581383 PLCL2Q9UPR0 1127 aa4.04□□□□□ -1.76
SMCHD1-205ENST00000581383 SATB2Q9UPW6 733 aa4.04□□□□□ -1.76
SMCHD1-205ENST00000581383 SNX5Q9Y5X3 404 aa4.04□□□□□ -1.76
SMCHD1-205ENST00000581383 NEDD4P46934 1319 aa4.03□□□□□ -1.76
SMCHD1-205ENST00000581383 IGKV3D-20A0A0C4DH25 116 aa4.03□□□□□ -1.76
SMCHD1-205ENST00000581383 CCDC162PA2VCL2 907 aa4.03□□□□□ -1.76
SMCHD1-205ENST00000581383 KRTAP9-6A8MVA2 160 aa4.03□□□□□ -1.76
SMCHD1-205ENST00000581383 M0R296 226 aa4.03□□□□□ -1.76
SMCHD1-205ENST00000581383 GRAP2O75791 330 aa4.03□□□□□ -1.76
SMCHD1-205ENST00000581383 NXPH2O95156 264 aa4.03□□□□□ -1.76
SMCHD1-205ENST00000581383 LETM1O95202 739 aaPredicted RBP4.03□□□□□ -1.76
SMCHD1-205ENST00000581383 IGHEP01854 428 aa4.03□□□□□ -1.76
SMCHD1-205ENST00000581383 KRT3P12035 628 aa4.03□□□□□ -1.76
SMCHD1-205ENST00000581383 MMP12P39900 470 aa4.03□□□□□ -1.76
SMCHD1-205ENST00000581383 CASP3P42574 277 aa4.03□□□□□ -1.76
SMCHD1-205ENST00000581383 ACKR1Q16570 336 aa4.03□□□□□ -1.76
SMCHD1-205ENST00000581383 AARDQ4LEZ3 155 aa4.03□□□□□ -1.76
SMCHD1-205ENST00000581383 KCTD11Q693B1 232 aa4.03□□□□□ -1.76
SMCHD1-205ENST00000581383 SLC27A4Q6P1M0 643 aa4.03□□□□□ -1.76
SMCHD1-205ENST00000581383 C15orf52Q6ZUT6 534 aaKnown RBP4.03□□□□□ -1.76
SMCHD1-205ENST00000581383 CHMP1BQ7LBR1 199 aa4.03□□□□□ -1.76
SMCHD1-205ENST00000581383 TEX26Q8N6G2 289 aa4.03□□□□□ -1.76
SMCHD1-205ENST00000581383 CCDC185Q8N715 623 aa4.03□□□□□ -1.76
SMCHD1-205ENST00000581383 NAT8LQ8N9F0 302 aa4.03□□□□□ -1.76
SMCHD1-205ENST00000581383 HCAR2Q8TDS4 363 aa4.03□□□□□ -1.76
SMCHD1-205ENST00000581383 ST7LQ8TDW4 575 aa4.03□□□□□ -1.76
SMCHD1-205ENST00000581383 SEPT8Q92599 483 aa4.03□□□□□ -1.76
SMCHD1-205ENST00000581383 FAM46BQ96A09 425 aa4.03□□□□□ -1.76
SMCHD1-205ENST00000581383 PDLIM5Q96HC4 596 aaKnown RBP4.03□□□□□ -1.76
SMCHD1-205ENST00000581383 ART5Q96L15 291 aa4.03□□□□□ -1.76
SMCHD1-205ENST00000581383 MID1IP1Q9NPA3 183 aa4.03□□□□□ -1.76
SMCHD1-205ENST00000581383 SPHK2Q9NRA0 654 aa4.03□□□□□ -1.76
SMCHD1-205ENST00000581383 KLHL8Q9P2G9 620 aaPredicted RBP4.03□□□□□ -1.76
SMCHD1-205ENST00000581383 ZNF510Q9Y2H8 683 aa4.03□□□□□ -1.76
SMCHD1-205ENST00000581383 MMP24Q9Y5R2 645 aa4.03□□□□□ -1.76
SMCHD1-205ENST00000581383 FAM149AA5PLN7 773 aa4.02□□□□□ -1.77
SMCHD1-205ENST00000581383 DUS4LO95620 317 aaKnown RBP4.02□□□□□ -1.77
SMCHD1-205ENST00000581383 CTNNA2P26232 953 aa4.02□□□□□ -1.77
SMCHD1-205ENST00000581383 HLA-FP30511 346 aa4.02□□□□□ -1.77
SMCHD1-205ENST00000581383 TSFMP43897 325 aaKnown RBP4.02□□□□□ -1.77
SMCHD1-205ENST00000581383 UBXN1Q04323 297 aa4.02□□□□□ -1.77
SMCHD1-205ENST00000581383 DRP2Q13474 957 aa4.02□□□□□ -1.77
SMCHD1-205ENST00000581383 RPS6KA1Q15418 735 aa4.02□□□□□ -1.77
SMCHD1-205ENST00000581383 FAM106AQ4KMX7 169 aa4.02□□□□□ -1.77
SMCHD1-205ENST00000581383 C14orf177Q52M58 125 aa4.02□□□□□ -1.77
SMCHD1-205ENST00000581383 WLSQ5T9L3 541 aa4.02□□□□□ -1.77
SMCHD1-205ENST00000581383 TMEM126BQ8IUX1 230 aa4.02□□□□□ -1.77
SMCHD1-205ENST00000581383 THEM5Q8N1Q8 247 aa4.02□□□□□ -1.77
SMCHD1-205ENST00000581383 SFRP1Q8N474 314 aa4.02□□□□□ -1.77
SMCHD1-205ENST00000581383 TMEM99Q8N816 258 aa4.02□□□□□ -1.77
SMCHD1-205ENST00000581383 OR5T2Q8NGG2 359 aa4.02□□□□□ -1.77
SMCHD1-205ENST00000581383 OR4D10Q8NGI6 311 aa4.02□□□□□ -1.77
SMCHD1-205ENST00000581383 MGARPQ8TDB4 240 aa4.02□□□□□ -1.77
SMCHD1-205ENST00000581383 BCL2L2Q92843 193 aaPredicted RBP4.02□□□□□ -1.77
SMCHD1-205ENST00000581383 CASP10Q92851 521 aa4.02□□□□□ -1.77
SMCHD1-205ENST00000581383 BPIFA2Q96DR5 249 aa4.02□□□□□ -1.77
SMCHD1-205ENST00000581383 MRPL9Q9BYD2 267 aaKnown RBP4.02□□□□□ -1.77
SMCHD1-205ENST00000581383 C3orf14Q9HBI5 128 aa4.02□□□□□ -1.77
SMCHD1-205ENST00000581383 CSNK1G3Q9Y6M4 447 aa4.02□□□□□ -1.77
SMCHD1-205ENST00000581383 C2orf92A0A1B0GVN3 265 aa4.01□□□□□ -1.77
SMCHD1-205ENST00000581383 C5orf51A6NDU8 294 aa4.01□□□□□ -1.77
SMCHD1-205ENST00000581383 CACNB4O00305 520 aaPredicted RBP4.01□□□□□ -1.77
SMCHD1-205ENST00000581383 SURF4O15260 269 aa4.01□□□□□ -1.77
SMCHD1-205ENST00000581383 KERAO60938 352 aa4.01□□□□□ -1.77
SMCHD1-205ENST00000581383 LRCH4O75427 683 aa4.01□□□□□ -1.77
SMCHD1-205ENST00000581383 ZFAND5O76080 213 aa4.01□□□□□ -1.77
SMCHD1-205ENST00000581383 CPA3P15088 417 aa4.01□□□□□ -1.77
SMCHD1-205ENST00000581383 GJB2P29033 226 aa4.01□□□□□ -1.77
SMCHD1-205ENST00000581383 SLC1A3P43003 542 aa4.01□□□□□ -1.77
SMCHD1-205ENST00000581383 SMSP52788 366 aa4.01□□□□□ -1.77
SMCHD1-205ENST00000581383 SLC3A1Q07837 685 aa4.01□□□□□ -1.77
SMCHD1-205ENST00000581383 AP1B1Q10567 949 aa4.01□□□□□ -1.77
SMCHD1-205ENST00000581383 NPRL3Q12980 569 aa4.01□□□□□ -1.77
SMCHD1-205ENST00000581383 RPA4Q13156 261 aa4.01□□□□□ -1.77
SMCHD1-205ENST00000581383 GRB14Q14449 540 aa4.01□□□□□ -1.77
SMCHD1-205ENST00000581383 LASP1Q14847 261 aaKnown RBP4.01□□□□□ -1.77
SMCHD1-205ENST00000581383 MAPK11Q15759 364 aa4.01□□□□□ -1.77
SMCHD1-205ENST00000581383 C2orf76Q3KRA6 126 aa4.01□□□□□ -1.77
SMCHD1-205ENST00000581383 CES4AQ5XG92 561 aa4.01□□□□□ -1.77
SMCHD1-205ENST00000581383 TCEAL6Q6IPX3 200 aa4.01□□□□□ -1.77
SMCHD1-205ENST00000581383 CATSPERDQ86XM0 798 aa4.01□□□□□ -1.77
SMCHD1-205ENST00000581383 LAX1Q8IWV1 398 aa4.01□□□□□ -1.77
SMCHD1-205ENST00000581383 CLEC1AQ8NC01 280 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms