RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 CUTCQ9NTM9 273 aa9.89□□□□□ -0.83
CCDC47-203ENST00000580986 AHSPQ9NZD4 102 aa9.89□□□□□ -0.83
CCDC47-203ENST00000580986 VPS29Q9UBQ0 182 aa9.89□□□□□ -0.83
CCDC47-203ENST00000580986 DKK4Q9UBT3 224 aa9.89□□□□□ -0.83
CCDC47-203ENST00000580986 PISDQ9UG56 409 aa9.89□□□□□ -0.83
CCDC47-203ENST00000580986 CDC14AQ9UNH5 594 aa9.89□□□□□ -0.83
CCDC47-203ENST00000580986 TMED5Q9Y3A6 229 aa9.89□□□□□ -0.83
CCDC47-203ENST00000580986 MSRB2Q9Y3D2 182 aa9.89□□□□□ -0.83
CCDC47-203ENST00000580986 CCL27Q9Y4X3 112 aa9.89□□□□□ -0.83
CCDC47-203ENST00000580986 TIMM22Q9Y584 194 aa9.89□□□□□ -0.83
CCDC47-203ENST00000580986 B3GALT1Q9Y5Z6 326 aa9.89□□□□□ -0.83
CCDC47-203ENST00000580986 SPTBN4Q9H254 2564 aa9.89□□□□□ -0.83
CCDC47-203ENST00000580986 KIF26BQ2KJY2 2108 aa9.89□□□□□ -0.83
CCDC47-203ENST00000580986 FAM149AA5PLN7 773 aa9.88□□□□□ -0.83
CCDC47-203ENST00000580986 TRPC5OSA6NMA1 111 aa9.88□□□□□ -0.83
CCDC47-203ENST00000580986 C9orf172C9J069 976 aa9.88□□□□□ -0.83
CCDC47-203ENST00000580986 RGS14O43566 566 aa9.88□□□□□ -0.83
CCDC47-203ENST00000580986 VPS4BO75351 444 aa9.88□□□□□ -0.83
CCDC47-203ENST00000580986 TNFSF15O95150 251 aa9.88□□□□□ -0.83
CCDC47-203ENST00000580986 DLGAP3O95886 979 aa9.88□□□□□ -0.83
CCDC47-203ENST00000580986 EIF2S1P05198 315 aaKnown RBP9.88□□□□□ -0.83
CCDC47-203ENST00000580986 HTR6P50406 440 aa9.88□□□□□ -0.83
CCDC47-203ENST00000580986 RPS13P62277 151 aaKnown RBP9.88□□□□□ -0.83
CCDC47-203ENST00000580986 CYP4F2P78329 520 aa9.88□□□□□ -0.83
CCDC47-203ENST00000580986 TCHHL1Q5QJ38 904 aaPredicted RBP9.88□□□□□ -0.83
CCDC47-203ENST00000580986 ZNF385CQ66K41 422 aaPredicted RBP9.88□□□□□ -0.83
CCDC47-203ENST00000580986 ADNP2Q6IQ32 1131 aa9.88□□□□□ -0.83
CCDC47-203ENST00000580986 ABHD17CQ6PCB6 329 aa9.88□□□□□ -0.83
CCDC47-203ENST00000580986 PAGE2Q7Z2X7 111 aa9.88□□□□□ -0.83
CCDC47-203ENST00000580986 PARP9Q8IXQ6 854 aa9.88□□□□□ -0.83
CCDC47-203ENST00000580986 METTL4Q8N3J2 472 aa9.88□□□□□ -0.83
CCDC47-203ENST00000580986 ZCCHC7Q8N3Z6 543 aaKnown RBP9.88□□□□□ -0.83
CCDC47-203ENST00000580986 KCT2Q8NC54 265 aa9.88□□□□□ -0.83
CCDC47-203ENST00000580986 ADAMTS18Q8TE60 1221 aa9.88□□□□□ -0.83
CCDC47-203ENST00000580986 UTP15Q8TED0 518 aaKnown RBP9.88□□□□□ -0.83
CCDC47-203ENST00000580986 RGMAQ96B86 450 aa9.88□□□□□ -0.83
CCDC47-203ENST00000580986 C19orf60Q96EN9 201 aa9.88□□□□□ -0.83
CCDC47-203ENST00000580986 MAELQ96JY0 434 aaKnown RBP9.88□□□□□ -0.83
CCDC47-203ENST00000580986 ZNF578Q96N58 590 aaPredicted RBP9.88□□□□□ -0.83
CCDC47-203ENST00000580986 QRFPRQ96P65 431 aa9.88□□□□□ -0.83
CCDC47-203ENST00000580986 GBP5Q96PP8 586 aa9.88□□□□□ -0.83
CCDC47-203ENST00000580986 ZNF317Q96PQ6 595 aaPredicted RBP9.88□□□□□ -0.83
CCDC47-203ENST00000580986 SCNM1Q9BWG6 230 aa9.88□□□□□ -0.83
CCDC47-203ENST00000580986 NPLQ9BXD5 320 aaPredicted RBP9.88□□□□□ -0.83
CCDC47-203ENST00000580986 AICDAQ9GZX7 198 aa9.88□□□□□ -0.83
CCDC47-203ENST00000580986 SPRTNQ9H040 489 aaPredicted RBP9.88□□□□□ -0.83
CCDC47-203ENST00000580986 TUBB1Q9H4B7 451 aa9.88□□□□□ -0.83
CCDC47-203ENST00000580986 ZNF395Q9H8N7 513 aaPredicted RBP9.88□□□□□ -0.83
CCDC47-203ENST00000580986 MEAF6Q9HAF1 191 aa9.88□□□□□ -0.83
CCDC47-203ENST00000580986 SLCO1B3Q9NPD5 702 aa9.88□□□□□ -0.83
CCDC47-203ENST00000580986 PRDM9Q9NQV7 894 aa9.88□□□□□ -0.83
CCDC47-203ENST00000580986 THSD1Q9NS62 852 aa9.88□□□□□ -0.83
CCDC47-203ENST00000580986 FARSBQ9NSD9 589 aaKnown RBP9.88□□□□□ -0.83
CCDC47-203ENST00000580986 TXLNGQ9NUQ3 528 aa9.88□□□□□ -0.83
CCDC47-203ENST00000580986 RIC8BQ9NVN3 520 aa9.88□□□□□ -0.83
CCDC47-203ENST00000580986 IGLV3-12A0A075B6K2 115 aa9.87□□□□□ -0.83
CCDC47-203ENST00000580986 TMEM233B4DJY2 109 aa9.87□□□□□ -0.83
CCDC47-203ENST00000580986 TCP11X1B4DZS4 312 aa9.87□□□□□ -0.83
CCDC47-203ENST00000580986 PLPP1O14494 284 aa9.87□□□□□ -0.83
CCDC47-203ENST00000580986 ZNF195O14628 629 aa9.87□□□□□ -0.83
CCDC47-203ENST00000580986 PIP5K1BO14986 540 aa9.87□□□□□ -0.83
CCDC47-203ENST00000580986 ERI3O43414 337 aaKnown RBP9.87□□□□□ -0.83
CCDC47-203ENST00000580986 FOXS1O43638 330 aa9.87□□□□□ -0.83
CCDC47-203ENST00000580986 GALR3O60755 368 aaPredicted RBP9.87□□□□□ -0.83
CCDC47-203ENST00000580986 TIAF1O95411 115 aa9.87□□□□□ -0.83
CCDC47-203ENST00000580986 ETHE1O95571 254 aa9.87□□□□□ -0.83
CCDC47-203ENST00000580986 TGFB1P01137 390 aa9.87□□□□□ -0.83
CCDC47-203ENST00000580986 ALBP02768 609 aa9.87□□□□□ -0.83
CCDC47-203ENST00000580986 CTSBP07858 339 aa9.87□□□□□ -0.83
CCDC47-203ENST00000580986 CYC1P08574 325 aa9.87□□□□□ -0.83
CCDC47-203ENST00000580986 CD63P08962 238 aa9.87□□□□□ -0.83
CCDC47-203ENST00000580986 PRR35P0CG20 571 aa9.87□□□□□ -0.83
CCDC47-203ENST00000580986 PIM1P11309 404 aaPredicted RBP9.87□□□□□ -0.83
CCDC47-203ENST00000580986 IL10P22301 178 aa9.87□□□□□ -0.83
CCDC47-203ENST00000580986 RBMS1P29558 406 aaKnown RBP9.87□□□□□ -0.83
CCDC47-203ENST00000580986 AVPR1BP47901 424 aa9.87□□□□□ -0.83
CCDC47-203ENST00000580986 NEK2P51955 445 aa9.87□□□□□ -0.83
CCDC47-203ENST00000580986 MAPK10P53779 464 aa9.87□□□□□ -0.83
CCDC47-203ENST00000580986 MTTPP55157 894 aa9.87□□□□□ -0.83
CCDC47-203ENST00000580986 IRX1P78414 480 aaPredicted RBP9.87□□□□□ -0.83
CCDC47-203ENST00000580986 BTKQ06187 659 aa9.87□□□□□ -0.83
CCDC47-203ENST00000580986 ABHD18Q0P651 414 aa9.87□□□□□ -0.83
CCDC47-203ENST00000580986 TBL3Q12788 808 aaKnown RBP9.87□□□□□ -0.83
CCDC47-203ENST00000580986 FOXC1Q12948 553 aa9.87□□□□□ -0.83
CCDC47-203ENST00000580986 DDX39BQ13838 428 aaKnown RBP9.87□□□□□ -0.83
CCDC47-203ENST00000580986 IMPG1Q17R60 797 aa9.87□□□□□ -0.83
CCDC47-203ENST00000580986 TOR1AIP1Q5JTV8 583 aa9.87□□□□□ -0.83
CCDC47-203ENST00000580986 OGFOD2Q6N063 350 aa9.87□□□□□ -0.83
CCDC47-203ENST00000580986 Q6ZSR9 355 aa9.87□□□□□ -0.83
CCDC47-203ENST00000580986 NUDT13Q86X67 352 aa9.87□□□□□ -0.83
CCDC47-203ENST00000580986 DSELQ8IZU8 1212 aa9.87□□□□□ -0.83
CCDC47-203ENST00000580986 CHTF18Q8WVB6 975 aa9.87□□□□□ -0.83
CCDC47-203ENST00000580986 CCT6BQ92526 530 aa9.87□□□□□ -0.83
CCDC47-203ENST00000580986 FKBP10Q96AY3 582 aa9.87□□□□□ -0.83
CCDC47-203ENST00000580986 FCRL1Q96LA6 429 aa9.87□□□□□ -0.83
CCDC47-203ENST00000580986 PPP3R2Q96LZ3 170 aa9.87□□□□□ -0.83
CCDC47-203ENST00000580986 SERINC2Q96SA4 455 aa9.87□□□□□ -0.83
CCDC47-203ENST00000580986 ZNF717Q9BY31 904 aaPredicted RBP9.87□□□□□ -0.83
CCDC47-203ENST00000580986 ULBP3Q9BZM4 244 aa9.87□□□□□ -0.83
CCDC47-203ENST00000580986 SHCBP1LQ9BZQ2 653 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms