RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 SH2B3Q9UQQ2 575 aa16.76■□□□□ 0.27
MKS1-209ENST00000580127 SAGE2PA6NJ88 616 aa16.75■□□□□ 0.27
MKS1-209ENST00000580127 CLDN4O14493 209 aa16.75■□□□□ 0.27
MKS1-209ENST00000580127 H2AFYO75367 372 aaKnown RBP16.75■□□□□ 0.27
MKS1-209ENST00000580127 F7P08709 466 aaPredicted RBP16.75■□□□□ 0.27
MKS1-209ENST00000580127 MEOX1P50221 254 aa16.75■□□□□ 0.27
MKS1-209ENST00000580127 PHKG1Q16816 387 aa16.75■□□□□ 0.27
MKS1-209ENST00000580127 ZNF468Q5VIY5 522 aaPredicted RBP16.75■□□□□ 0.27
MKS1-209ENST00000580127 SPNS3Q6ZMD2 512 aa16.75■□□□□ 0.27
MKS1-209ENST00000580127 C3P1Q6ZMU1 363 aa16.75■□□□□ 0.27
MKS1-209ENST00000580127 KIF2BQ8N4N8 673 aa16.75■□□□□ 0.27
MKS1-209ENST00000580127 SLC5A11Q8WWX8 675 aa16.75■□□□□ 0.27
MKS1-209ENST00000580127 PYCR2Q96C36 320 aa16.75■□□□□ 0.27
MKS1-209ENST00000580127 FBXL8Q96CD0 374 aa16.75■□□□□ 0.27
MKS1-209ENST00000580127 DMRTA2Q96SC8 542 aa16.75■□□□□ 0.27
MKS1-209ENST00000580127 KCNJ16Q9NPI9 418 aa16.75■□□□□ 0.27
MKS1-209ENST00000580127 TIMMDC1Q9NPL8 285 aa16.75■□□□□ 0.27
MKS1-209ENST00000580127 ASB1Q9Y576 335 aa16.75■□□□□ 0.27
MKS1-209ENST00000580127 KCNE2Q9Y6J6 123 aa16.75■□□□□ 0.27
MKS1-209ENST00000580127 MED13LQ71F56 2210 aa16.75■□□□□ 0.27
MKS1-209ENST00000580127 FBN2P35556 2912 aa16.75■□□□□ 0.27
MKS1-209ENST00000580127 DCHS2Q6V1P9 2916 aa16.75■□□□□ 0.27
MKS1-209ENST00000580127 SYNDIG1LA6NDD5 238 aa16.74■□□□□ 0.27
MKS1-209ENST00000580127 PEX1O43933 1283 aa16.74■□□□□ 0.27
MKS1-209ENST00000580127 CDC40O60508 579 aaKnown RBP eCLIP16.74■□□□□ 0.27
MKS1-209ENST00000580127 HPDP32754 393 aaPredicted RBP16.74■□□□□ 0.27
MKS1-209ENST00000580127 MAGEA3P43357 314 aa16.74■□□□□ 0.27
MKS1-209ENST00000580127 SCTRP47872 440 aa16.74■□□□□ 0.27
MKS1-209ENST00000580127 OLR1P78380 273 aa16.74■□□□□ 0.27
MKS1-209ENST00000580127 BTG2P78543 158 aa16.74■□□□□ 0.27
MKS1-209ENST00000580127 HSF1Q00613 529 aa16.74■□□□□ 0.27
MKS1-209ENST00000580127 RBBP5Q15291 538 aaKnown RBP16.74■□□□□ 0.27
MKS1-209ENST00000580127 TERF2Q15554 542 aa16.74■□□□□ 0.27
MKS1-209ENST00000580127 SPANXN3Q5MJ09 141 aa16.74■□□□□ 0.27
MKS1-209ENST00000580127 ARHGAP11AQ6P4F7 1023 aa16.74■□□□□ 0.27
MKS1-209ENST00000580127 SULF2Q8IWU5 870 aa16.74■□□□□ 0.27
MKS1-209ENST00000580127 ARMC10Q8N2F6 343 aa16.74■□□□□ 0.27
MKS1-209ENST00000580127 UTP15Q8TED0 518 aaKnown RBP16.74■□□□□ 0.27
MKS1-209ENST00000580127 RND1Q92730 232 aa16.74■□□□□ 0.27
MKS1-209ENST00000580127 RHBGQ9H310 441 aa16.74■□□□□ 0.27
MKS1-209ENST00000580127 TP63Q9H3D4 680 aaPredicted RBP16.74■□□□□ 0.27
MKS1-209ENST00000580127 PELI2Q9HAT8 420 aa16.74■□□□□ 0.27
MKS1-209ENST00000580127 PPANQ9NQ55 473 aaKnown RBP16.74■□□□□ 0.27
MKS1-209ENST00000580127 IGSF5Q9NSI5 407 aa16.74■□□□□ 0.27
MKS1-209ENST00000580127 FBXW2Q9UKT8 454 aa16.74■□□□□ 0.27
MKS1-209ENST00000580127 CORO1CQ9ULV4 474 aaPredicted RBP16.74■□□□□ 0.27
MKS1-209ENST00000580127 ERVK-11Q9UQG0 969 aa16.74■□□□□ 0.27
MKS1-209ENST00000580127 VWA7Q9Y334 891 aa16.74■□□□□ 0.27
MKS1-209ENST00000580127 MMACHCQ9Y4U1 282 aa16.74■□□□□ 0.27
MKS1-209ENST00000580127 A0A088AWK7 358 aa16.73■□□□□ 0.27
MKS1-209ENST00000580127 GOLGA6L10A0A0M3HER8 536 aa16.73■□□□□ 0.27
MKS1-209ENST00000580127 A0A1B0GTH9 108 aa16.73■□□□□ 0.27
MKS1-209ENST00000580127 TCRBV16S1A1N1A0A5B0 115 aa16.73■□□□□ 0.27
MKS1-209ENST00000580127 A8MUA0 341 aa16.73■□□□□ 0.27
MKS1-209ENST00000580127 AHSGP02765 367 aa16.73■□□□□ 0.27
MKS1-209ENST00000580127 SERPINA6P08185 405 aa16.73■□□□□ 0.27
MKS1-209ENST00000580127 ZNF10P21506 573 aaPredicted RBP16.73■□□□□ 0.27
MKS1-209ENST00000580127 CHRNB4P30926 498 aa16.73■□□□□ 0.27
MKS1-209ENST00000580127 HNF4AP41235 474 aa16.73■□□□□ 0.27
MKS1-209ENST00000580127 RAB8AP61006 207 aa16.73■□□□□ 0.27
MKS1-209ENST00000580127 STXBP1P61764 594 aaKnown RBP16.73■□□□□ 0.27
MKS1-209ENST00000580127 CRYMQ14894 314 aa16.73■□□□□ 0.27
MKS1-209ENST00000580127 PPP1R7Q15435 360 aa16.73■□□□□ 0.27
MKS1-209ENST00000580127 CDSNQ15517 529 aa16.73■□□□□ 0.27
MKS1-209ENST00000580127 BBS9Q3SYG4 887 aa16.73■□□□□ 0.27
MKS1-209ENST00000580127 RNFT1Q5M7Z0 435 aa16.73■□□□□ 0.27
MKS1-209ENST00000580127 HECTD2Q5U5R9 776 aa16.73■□□□□ 0.27
MKS1-209ENST00000580127 TTC27Q6P3X3 843 aa16.73■□□□□ 0.27
MKS1-209ENST00000580127 ACAD11Q709F0 780 aa16.73■□□□□ 0.27
MKS1-209ENST00000580127 SHISA5Q8N114 240 aa16.73■□□□□ 0.27
MKS1-209ENST00000580127 CYP4Z2PQ8N1L4 340 aa16.73■□□□□ 0.27
MKS1-209ENST00000580127 NAT8LQ8N9F0 302 aa16.73■□□□□ 0.27
MKS1-209ENST00000580127 B3GNT7Q8NFL0 401 aa16.73■□□□□ 0.27
MKS1-209ENST00000580127 LILRB4Q8NHJ6 448 aa16.73■□□□□ 0.27
MKS1-209ENST00000580127 C16orf52Q8NHV5 167 aa16.73■□□□□ 0.27
MKS1-209ENST00000580127 NEIL2Q969S2 332 aa16.73■□□□□ 0.27
MKS1-209ENST00000580127 ZFATQ9P243 1243 aa16.73■□□□□ 0.27
MKS1-209ENST00000580127 MRPS33Q9Y291 106 aaKnown RBP16.73■□□□□ 0.27
MKS1-209ENST00000580127 YARS2Q9Y2Z4 477 aaKnown RBP16.73■□□□□ 0.27
MKS1-209ENST00000580127 JRKLQ9Y4A0 524 aa16.73■□□□□ 0.27
MKS1-209ENST00000580127 CSMD1Q96PZ7 3565 aa16.72■□□□□ 0.27
MKS1-209ENST00000580127 TRBV11-1A0A0K0K1C0 115 aa16.72■□□□□ 0.27
MKS1-209ENST00000580127 ADAM10O14672 748 aa16.72■□□□□ 0.27
MKS1-209ENST00000580127 GUCA1CO95843 209 aa16.72■□□□□ 0.27
MKS1-209ENST00000580127 TUBB4AP04350 444 aa16.72■□□□□ 0.27
MKS1-209ENST00000580127 CD1EP15812 388 aa16.72■□□□□ 0.27
MKS1-209ENST00000580127 MAOAP21397 527 aa16.72■□□□□ 0.27
MKS1-209ENST00000580127 PTGER1P34995 402 aa16.72■□□□□ 0.27
MKS1-209ENST00000580127 SSR4P51571 173 aa16.72■□□□□ 0.27
MKS1-209ENST00000580127 CDKN2DP55273 166 aa16.72■□□□□ 0.27
MKS1-209ENST00000580127 RCN2Q14257 317 aa16.72■□□□□ 0.27
MKS1-209ENST00000580127 CATSPEREQ5SY80 951 aa16.72■□□□□ 0.27
MKS1-209ENST00000580127 RGS9BPQ6ZS82 235 aa16.72■□□□□ 0.27
MKS1-209ENST00000580127 CEP128Q6ZU80 1094 aa16.72■□□□□ 0.27
MKS1-209ENST00000580127 GALNT7Q86SF2 657 aa16.72■□□□□ 0.27
MKS1-209ENST00000580127 GPALPP1Q8IXQ4 340 aa16.72■□□□□ 0.27
MKS1-209ENST00000580127 NFAM1Q8NET5 270 aaPredicted RBP16.72■□□□□ 0.27
MKS1-209ENST00000580127 TTLQ8NG68 377 aa16.72■□□□□ 0.27
MKS1-209ENST00000580127 VMP1Q96GC9 406 aa16.72■□□□□ 0.27
MKS1-209ENST00000580127 PDLIM5Q96HC4 596 aaKnown RBP16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms