RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 IKZF2Q9UKS7 526 aa12.66□□□□□ -0.38
PCDHGB3-201ENST00000576222 IQCMA0A1B0GVH7 501 aa12.66□□□□□ -0.38
PCDHGB3-201ENST00000576222 PI15O43692 258 aa12.66□□□□□ -0.38
PCDHGB3-201ENST00000576222 MTX2O75431 263 aa12.66□□□□□ -0.38
PCDHGB3-201ENST00000576222 POP4O95707 220 aaKnown RBP12.66□□□□□ -0.38
PCDHGB3-201ENST00000576222 MAGEA12P43365 314 aa12.66□□□□□ -0.38
PCDHGB3-201ENST00000576222 PRKCDQ05655 676 aa12.66□□□□□ -0.38
PCDHGB3-201ENST00000576222 FNDC3BQ53EP0 1204 aaKnown RBP12.66□□□□□ -0.38
PCDHGB3-201ENST00000576222 ATAD3CQ5T2N8 411 aa12.66□□□□□ -0.38
PCDHGB3-201ENST00000576222 DEFB132Q7Z7B7 95 aa12.66□□□□□ -0.38
PCDHGB3-201ENST00000576222 PEG10Q86TG7 708 aaKnown RBP12.66□□□□□ -0.38
PCDHGB3-201ENST00000576222 SAMD12Q8N8I0 201 aa12.66□□□□□ -0.38
PCDHGB3-201ENST00000576222 CEP76Q8TAP6 659 aa12.66□□□□□ -0.38
PCDHGB3-201ENST00000576222 ADAMTS16Q8TE57 1224 aa12.66□□□□□ -0.38
PCDHGB3-201ENST00000576222 PGAP3Q96FM1 320 aaPredicted RBP12.66□□□□□ -0.38
PCDHGB3-201ENST00000576222 SUSD3Q96L08 255 aa12.66□□□□□ -0.38
PCDHGB3-201ENST00000576222 PSKH2Q96QS6 385 aa12.66□□□□□ -0.38
PCDHGB3-201ENST00000576222 IFT27Q9BW83 186 aa12.66□□□□□ -0.38
PCDHGB3-201ENST00000576222 BRD7Q9NPI1 651 aa12.66□□□□□ -0.38
PCDHGB3-201ENST00000576222 HSFX1Q9UBD0 423 aa12.66□□□□□ -0.38
PCDHGB3-201ENST00000576222 FBXO9Q9UK97 447 aaPredicted RBP12.66□□□□□ -0.38
PCDHGB3-201ENST00000576222 UPK3BL1B0FP48 263 aa12.66□□□□□ -0.38
PCDHGB3-201ENST00000576222 UPK3BL2E5RIL1 263 aa12.66□□□□□ -0.38
PCDHGB3-201ENST00000576222 HIST1H2ABP04908 130 aa12.66□□□□□ -0.38
PCDHGB3-201ENST00000576222 KHKP50053 298 aa12.66□□□□□ -0.38
PCDHGB3-201ENST00000576222 GHRHRQ02643 423 aa12.66□□□□□ -0.38
PCDHGB3-201ENST00000576222 ANKRD54Q6NXT1 300 aa12.66□□□□□ -0.38
PCDHGB3-201ENST00000576222 SLC36A4Q6YBV0 504 aa12.66□□□□□ -0.38
PCDHGB3-201ENST00000576222 HIST3H2AQ7L7L0 130 aa12.66□□□□□ -0.38
PCDHGB3-201ENST00000576222 HIST1H2ACQ93077 130 aa12.66□□□□□ -0.38
PCDHGB3-201ENST00000576222 SNX18Q96RF0 628 aa12.66□□□□□ -0.38
PCDHGB3-201ENST00000576222 NELL2Q99435 816 aa12.66□□□□□ -0.38
PCDHGB3-201ENST00000576222 TRIM36Q9NQ86 728 aa12.66□□□□□ -0.38
PCDHGB3-201ENST00000576222 GKN1Q9NS71 199 aa12.66□□□□□ -0.38
PCDHGB3-201ENST00000576222 CFAP97Q9P2B7 532 aa12.66□□□□□ -0.38
PCDHGB3-201ENST00000576222 ZNF69Q9UC07 566 aa12.66□□□□□ -0.38
PCDHGB3-201ENST00000576222 FKBP7Q9Y680 259 aa12.66□□□□□ -0.38
PCDHGB3-201ENST00000576222 FAM170BA6NMN3 283 aa12.65□□□□□ -0.38
PCDHGB3-201ENST00000576222 TNFSF8P32971 234 aa12.65□□□□□ -0.38
PCDHGB3-201ENST00000576222 RGS6P49758 472 aa12.65□□□□□ -0.38
PCDHGB3-201ENST00000576222 TAS2R50P59544 299 aa12.65□□□□□ -0.38
PCDHGB3-201ENST00000576222 SLC3A1Q07837 685 aa12.65□□□□□ -0.38
PCDHGB3-201ENST00000576222 SGCGQ13326 291 aa12.65□□□□□ -0.38
PCDHGB3-201ENST00000576222 SELPLGQ14242 412 aa12.65□□□□□ -0.38
PCDHGB3-201ENST00000576222 ADGRF1Q5T601 910 aa12.65□□□□□ -0.38
PCDHGB3-201ENST00000576222 PAMR1Q6UXH9 720 aa12.65□□□□□ -0.38
PCDHGB3-201ENST00000576222 LINC00299Q6ZSB3 139 aa12.65□□□□□ -0.38
PCDHGB3-201ENST00000576222 SPATC1Q76KD6 591 aa12.65□□□□□ -0.38
PCDHGB3-201ENST00000576222 NRARPQ7Z6K4 114 aa12.65□□□□□ -0.38
PCDHGB3-201ENST00000576222 SPAG16Q8N0X2 631 aa12.65□□□□□ -0.38
PCDHGB3-201ENST00000576222 CXorf40AQ8TE69 158 aa12.65□□□□□ -0.38
PCDHGB3-201ENST00000576222 ATOH8Q96SQ7 321 aa12.65□□□□□ -0.38
PCDHGB3-201ENST00000576222 GMLQ99445 158 aa12.65□□□□□ -0.38
PCDHGB3-201ENST00000576222 INPP5KQ9BT40 448 aa12.65□□□□□ -0.38
PCDHGB3-201ENST00000576222 TTLL2Q9BWV7 592 aa12.65□□□□□ -0.38
PCDHGB3-201ENST00000576222 GON7Q9BXV9 100 aa12.65□□□□□ -0.38
PCDHGB3-201ENST00000576222 SLC38A8A6NNN8 435 aa12.65□□□□□ -0.38
PCDHGB3-201ENST00000576222 SOBPA7XYQ1 873 aa12.65□□□□□ -0.38
PCDHGB3-201ENST00000576222 FAM155AB1AL88 458 aaPredicted RBP12.65□□□□□ -0.38
PCDHGB3-201ENST00000576222 KDELR3O43731 214 aa12.65□□□□□ -0.38
PCDHGB3-201ENST00000576222 TOXO94900 526 aa12.65□□□□□ -0.38
PCDHGB3-201ENST00000576222 ZNF806P0C7X5 589 aa12.65□□□□□ -0.38
PCDHGB3-201ENST00000576222 ARRB2P32121 409 aa12.65□□□□□ -0.38
PCDHGB3-201ENST00000576222 CNR2P34972 360 aa12.65□□□□□ -0.38
PCDHGB3-201ENST00000576222 ARCN1P48444 511 aaKnown RBP12.65□□□□□ -0.38
PCDHGB3-201ENST00000576222 SCRN3Q0VDG4 424 aa12.65□□□□□ -0.38
PCDHGB3-201ENST00000576222 TBCEQ15813 527 aaPredicted RBP12.65□□□□□ -0.38
PCDHGB3-201ENST00000576222 KCTD11Q693B1 232 aa12.65□□□□□ -0.38
PCDHGB3-201ENST00000576222 KDELC1Q6UW63 502 aa12.65□□□□□ -0.38
PCDHGB3-201ENST00000576222 RTL4Q6ZR62 310 aa12.65□□□□□ -0.38
PCDHGB3-201ENST00000576222 RD3Q7Z3Z2 195 aa12.65□□□□□ -0.38
PCDHGB3-201ENST00000576222 BEND7Q8N7W2 519 aaPredicted RBP12.65□□□□□ -0.38
PCDHGB3-201ENST00000576222 SLCO4A1Q96BD0 722 aa12.65□□□□□ -0.38
PCDHGB3-201ENST00000576222 SCRN2Q96FV2 425 aa12.65□□□□□ -0.38
PCDHGB3-201ENST00000576222 TXNDC15Q96J42 360 aa12.65□□□□□ -0.38
PCDHGB3-201ENST00000576222 UBXN10Q96LJ8 280 aa12.65□□□□□ -0.38
PCDHGB3-201ENST00000576222 MGME1Q9BQP7 344 aa12.65□□□□□ -0.38
PCDHGB3-201ENST00000576222 SLC7A5P2Q9GIP4 190 aa12.65□□□□□ -0.38
PCDHGB3-201ENST00000576222 HCN3Q9P1Z3 774 aa12.65□□□□□ -0.38
PCDHGB3-201ENST00000576222 ABCD2Q9UBJ2 740 aa12.65□□□□□ -0.38
PCDHGB3-201ENST00000576222 CORINQ9Y5Q5 1042 aa12.65□□□□□ -0.38
PCDHGB3-201ENST00000576222 MAU2Q9Y6X3 613 aa12.65□□□□□ -0.38
PCDHGB3-201ENST00000576222 PLCH1Q4KWH8 1693 aa12.65□□□□□ -0.38
PCDHGB3-201ENST00000576222 A0A0G2JLL6 359 aaPredicted RBP12.65□□□□□ -0.38
PCDHGB3-201ENST00000576222 GRM6O15303 877 aa12.65□□□□□ -0.38
PCDHGB3-201ENST00000576222 CDK1P06493 297 aa12.65□□□□□ -0.38
PCDHGB3-201ENST00000576222 F8A1P23610 371 aa12.65□□□□□ -0.38
PCDHGB3-201ENST00000576222 AVPR1BP47901 424 aa12.65□□□□□ -0.38
PCDHGB3-201ENST00000576222 RPS13P62277 151 aaKnown RBP12.65□□□□□ -0.38
PCDHGB3-201ENST00000576222 ADPRMQ3LIE5 342 aa12.65□□□□□ -0.38
PCDHGB3-201ENST00000576222 HSD17B12Q53GQ0 312 aa12.65□□□□□ -0.38
PCDHGB3-201ENST00000576222 LRRC73Q5JTD7 316 aa12.65□□□□□ -0.38
PCDHGB3-201ENST00000576222 IRAK1BP1Q5VVH5 260 aa12.65□□□□□ -0.38
PCDHGB3-201ENST00000576222 FAM180AQ6UWF9 173 aa12.65□□□□□ -0.38
PCDHGB3-201ENST00000576222 PRRT2Q7Z6L0 340 aaPredicted RBP12.65□□□□□ -0.38
PCDHGB3-201ENST00000576222 COMMD2Q86X83 199 aa12.65□□□□□ -0.38
PCDHGB3-201ENST00000576222 TICAM1Q8IUC6 712 aa12.65□□□□□ -0.38
PCDHGB3-201ENST00000576222 DNAJA4Q8WW22 397 aaPredicted RBP12.65□□□□□ -0.38
PCDHGB3-201ENST00000576222 SPATA9Q9BWV2 254 aa12.65□□□□□ -0.38
PCDHGB3-201ENST00000576222 HEBP1Q9NRV9 189 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms