RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 ROGDIQ9GZN7 287 aa18.3■□□□□ 0.52
SCARF1-206ENST00000573852 PSMD11O00231 422 aa18.3■□□□□ 0.52
SCARF1-206ENST00000573852 RNASET2O00584 256 aaKnown RBP18.3■□□□□ 0.52
SCARF1-206ENST00000573852 KPNA5O15131 536 aa18.3■□□□□ 0.52
SCARF1-206ENST00000573852 ASNA1O43681 348 aa18.3■□□□□ 0.52
SCARF1-206ENST00000573852 SLCO2B1O94956 709 aa18.3■□□□□ 0.52
SCARF1-206ENST00000573852 MED26O95402 600 aa18.3■□□□□ 0.52
SCARF1-206ENST00000573852 GBAP04062 536 aa18.3■□□□□ 0.52
SCARF1-206ENST00000573852 HSD3B1P14060 373 aa18.3■□□□□ 0.52
SCARF1-206ENST00000573852 HSD3B2P26439 372 aa18.3■□□□□ 0.52
SCARF1-206ENST00000573852 CASP3P42574 277 aa18.3■□□□□ 0.52
SCARF1-206ENST00000573852 NR4A2P43354 598 aa18.3■□□□□ 0.52
SCARF1-206ENST00000573852 RPS13P62277 151 aaKnown RBP18.3■□□□□ 0.52
SCARF1-206ENST00000573852 TP53BP2Q13625 1128 aa18.3■□□□□ 0.52
SCARF1-206ENST00000573852 SCARB2Q14108 478 aa18.3■□□□□ 0.52
SCARF1-206ENST00000573852 CHST14Q8NCH0 376 aa18.3■□□□□ 0.52
SCARF1-206ENST00000573852 ATL1Q8WXF7 558 aa18.3■□□□□ 0.52
SCARF1-206ENST00000573852 GTPBP3Q969Y2 492 aaKnown RBP18.3■□□□□ 0.52
SCARF1-206ENST00000573852 METTL2AQ96IZ6 378 aaKnown RBP18.3■□□□□ 0.52
SCARF1-206ENST00000573852 EHD1Q9H4M9 534 aa18.3■□□□□ 0.52
SCARF1-206ENST00000573852 LSM7Q9UK45 103 aaKnown RBP18.3■□□□□ 0.52
SCARF1-206ENST00000573852 ACSL6Q9UKU0 697 aa18.3■□□□□ 0.52
SCARF1-206ENST00000573852 KLK4Q9Y5K2 254 aa18.3■□□□□ 0.52
SCARF1-206ENST00000573852 PEX16Q9Y5Y5 336 aa18.3■□□□□ 0.52
SCARF1-206ENST00000573852 KIAA0513O60268 411 aa18.29■□□□□ 0.52
SCARF1-206ENST00000573852 PSIP1O75475 530 aaKnown RBP18.29■□□□□ 0.52
SCARF1-206ENST00000573852 ZNF8P17098 575 aaPredicted RBP18.29■□□□□ 0.52
SCARF1-206ENST00000573852 TIA1P31483 386 aaKnown RBP eCLIP18.29■□□□□ 0.523e-6■■□□□ 11.6
SCARF1-206ENST00000573852 TEKQ02763 1124 aa18.29■□□□□ 0.52
SCARF1-206ENST00000573852 EIF4HQ15056 248 aaKnown RBP18.29■□□□□ 0.52
SCARF1-206ENST00000573852 MPPE1Q53F39 396 aa18.29■□□□□ 0.52
SCARF1-206ENST00000573852 OTOP2Q7RTS6 562 aa18.29■□□□□ 0.52
SCARF1-206ENST00000573852 CMTM8Q8IZV2 173 aa18.29■□□□□ 0.52
SCARF1-206ENST00000573852 CRELD1Q96HD1 420 aa18.29■□□□□ 0.52
SCARF1-206ENST00000573852 SLC35A5Q9BS91 424 aa18.29■□□□□ 0.52
SCARF1-206ENST00000573852 ACER3Q9NUN7 267 aa18.29■□□□□ 0.52
SCARF1-206ENST00000573852 MYOFQ9NZM1 2061 aa18.29■□□□□ 0.52
SCARF1-206ENST00000573852 OBSL1O75147 1896 aa18.29■□□□□ 0.52
SCARF1-206ENST00000573852 SSX4O60224 188 aa18.29■□□□□ 0.52
SCARF1-206ENST00000573852 C6orf47O95873 294 aa18.29■□□□□ 0.52
SCARF1-206ENST00000573852 BDKRB1P46663 353 aa18.29■□□□□ 0.52
SCARF1-206ENST00000573852 PREPP48147 710 aa18.29■□□□□ 0.52
SCARF1-206ENST00000573852 SREBF2Q12772 1141 aa18.29■□□□□ 0.52
SCARF1-206ENST00000573852 PTGES3Q15185 160 aaKnown RBP18.29■□□□□ 0.52
SCARF1-206ENST00000573852 GCNT6Q5T4J0 391 aa18.29■□□□□ 0.52
SCARF1-206ENST00000573852 ZDHHC20Q5W0Z9 365 aa18.29■□□□□ 0.52
SCARF1-206ENST00000573852 CLIP4Q8N3C7 705 aa18.29■□□□□ 0.52
SCARF1-206ENST00000573852 CELF2-AS1Q8N7Q2 184 aa18.29■□□□□ 0.52
SCARF1-206ENST00000573852 SDHCQ99643 169 aaPredicted RBP18.29■□□□□ 0.52
SCARF1-206ENST00000573852 TMEM121BQ9BXQ6 578 aaPredicted RBP18.29■□□□□ 0.52
SCARF1-206ENST00000573852 THSD1Q9NS62 852 aa18.29■□□□□ 0.52
SCARF1-206ENST00000573852 EHD3Q9NZN3 535 aa18.29■□□□□ 0.52
SCARF1-206ENST00000573852 SLC16A8O95907 504 aa18.28■□□□□ 0.52
SCARF1-206ENST00000573852 IFITM2Q01629 132 aa18.28■□□□□ 0.52
SCARF1-206ENST00000573852 MC1RQ01726 317 aa18.28■□□□□ 0.52
SCARF1-206ENST00000573852 TSTQ16762 297 aaKnown RBP18.28■□□□□ 0.52
SCARF1-206ENST00000573852 HSD11B1LQ7Z5J1 315 aa18.28■□□□□ 0.52
SCARF1-206ENST00000573852 CIDECQ96AQ7 238 aaPredicted RBP18.28■□□□□ 0.52
SCARF1-206ENST00000573852 FAM129BQ96TA1 746 aa18.28■□□□□ 0.52
SCARF1-206ENST00000573852 KLHL3Q9UH77 587 aa18.28■□□□□ 0.52
SCARF1-206ENST00000573852 HELZP42694 1942 aaKnown RBP18.28■□□□□ 0.52
SCARF1-206ENST00000573852 MN1Q10571 1320 aaPredicted RBP18.28■□□□□ 0.52
SCARF1-206ENST00000573852 PCM1Q15154 2024 aa18.28■□□□□ 0.52
SCARF1-206ENST00000573852 PRAMEF33A0A0G2JMD5 474 aa18.28■□□□□ 0.52
SCARF1-206ENST00000573852 CTDSP2O14595 271 aa18.28■□□□□ 0.52
SCARF1-206ENST00000573852 DYRK3O43781 588 aa18.28■□□□□ 0.52
SCARF1-206ENST00000573852 PRAMEF10O60809 474 aa18.28■□□□□ 0.52
SCARF1-206ENST00000573852 CKMP06732 381 aa18.28■□□□□ 0.52
SCARF1-206ENST00000573852 PTX3P26022 381 aaPredicted RBP18.28■□□□□ 0.52
SCARF1-206ENST00000573852 IMPA1P29218 277 aa18.28■□□□□ 0.52
SCARF1-206ENST00000573852 HLA-FP30511 346 aa18.28■□□□□ 0.52
SCARF1-206ENST00000573852 EPHB3P54753 998 aa18.28■□□□□ 0.52
SCARF1-206ENST00000573852 OLR1P78380 273 aa18.28■□□□□ 0.52
SCARF1-206ENST00000573852 MED22Q15528 200 aa18.28■□□□□ 0.52
SCARF1-206ENST00000573852 SPIN4Q56A73 249 aa18.28■□□□□ 0.52
SCARF1-206ENST00000573852 HTR3DQ70Z44 454 aa18.28■□□□□ 0.52
SCARF1-206ENST00000573852 NLRP8Q86W28 1048 aa18.28■□□□□ 0.52
SCARF1-206ENST00000573852 ATCAYQ86WG3 371 aa18.28■□□□□ 0.52
SCARF1-206ENST00000573852 GOT1L1Q8NHS2 421 aaPredicted RBP18.28■□□□□ 0.52
SCARF1-206ENST00000573852 AUTS2Q8WXX7 1259 aa18.28■□□□□ 0.52
SCARF1-206ENST00000573852 LMLNQ96KR4 655 aa18.28■□□□□ 0.52
SCARF1-206ENST00000573852 MGLLQ99685 303 aa18.28■□□□□ 0.52
SCARF1-206ENST00000573852 CPEB1Q9BZB8 566 aaKnown RBP18.28■□□□□ 0.52
SCARF1-206ENST00000573852 ZNF556Q9HAH1 456 aa18.28■□□□□ 0.52
SCARF1-206ENST00000573852 C1GALT1Q9NS00 363 aa18.28■□□□□ 0.52
SCARF1-206ENST00000573852 FBXL12Q9NXK8 326 aa18.28■□□□□ 0.52
SCARF1-206ENST00000573852 HS3ST2Q9Y278 367 aa18.28■□□□□ 0.52
SCARF1-206ENST00000573852 ZW10O43264 779 aa18.27■□□□□ 0.52
SCARF1-206ENST00000573852 BMPR1AP36894 532 aa18.27■□□□□ 0.52
SCARF1-206ENST00000573852 DMC1Q14565 340 aa18.27■□□□□ 0.52
SCARF1-206ENST00000573852 GANABQ14697 944 aaKnown RBP18.27■□□□□ 0.52
SCARF1-206ENST00000573852 MPP7Q5T2T1 576 aa18.27■□□□□ 0.52
SCARF1-206ENST00000573852 C19orf48Q6RUI8 117 aa18.27■□□□□ 0.52
SCARF1-206ENST00000573852 Q6ZVL8 140 aa18.27■□□□□ 0.52
SCARF1-206ENST00000573852 ZNF367Q7RTV3 350 aa18.27■□□□□ 0.52
SCARF1-206ENST00000573852 CCDC190Q86UF4 302 aa18.27■□□□□ 0.52
SCARF1-206ENST00000573852 OR52N2Q8NGI0 321 aa18.27■□□□□ 0.52
SCARF1-206ENST00000573852 OR5AK3PQ8NH89 298 aa18.27■□□□□ 0.52
SCARF1-206ENST00000573852 KCNS3Q9BQ31 491 aa18.27■□□□□ 0.52
SCARF1-206ENST00000573852 BHLHE41Q9C0J9 482 aaPredicted RBP18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms