RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 SERPINA6P08185 405 aa16.28■□□□□ 0.2
SMG6-212ENST00000573153 C1GALT1C1LP0DN25 315 aa16.28■□□□□ 0.2
SMG6-212ENST00000573153 HNRNPH1P31943 449 aaKnown RBP16.28■□□□□ 0.2
SMG6-212ENST00000573153 GLRBP48167 497 aa16.28■□□□□ 0.2
SMG6-212ENST00000573153 AP2B1P63010 937 aa16.28■□□□□ 0.2
SMG6-212ENST00000573153 RGS1Q08116 209 aa16.28■□□□□ 0.2
SMG6-212ENST00000573153 CDC16Q13042 620 aa16.28■□□□□ 0.2
SMG6-212ENST00000573153 FHL5Q5TD97 284 aa16.28■□□□□ 0.2
SMG6-212ENST00000573153 IRAK1BP1Q5VVH5 260 aa16.28■□□□□ 0.2
SMG6-212ENST00000573153 ABHD13Q7L211 337 aa16.28■□□□□ 0.2
SMG6-212ENST00000573153 NOA1Q8NC60 698 aaKnown RBP16.28■□□□□ 0.2
SMG6-212ENST00000573153 WDR34Q96EX3 536 aa16.28■□□□□ 0.2
SMG6-212ENST00000573153 CNDP1Q96KN2 507 aa16.28■□□□□ 0.2
SMG6-212ENST00000573153 ATOH8Q96SQ7 321 aa16.28■□□□□ 0.2
SMG6-212ENST00000573153 SLC29A3Q9BZD2 475 aa16.28■□□□□ 0.2
SMG6-212ENST00000573153 ACSS3Q9H6R3 686 aa16.28■□□□□ 0.2
SMG6-212ENST00000573153 IGSF5Q9NSI5 407 aa16.28■□□□□ 0.2
SMG6-212ENST00000573153 URADA6NGE7 173 aa16.27■□□□□ 0.2
SMG6-212ENST00000573153 NCF1BA6NI72 391 aaPredicted RBP16.27■□□□□ 0.2
SMG6-212ENST00000573153 NCF1CA8MVU1 366 aaPredicted RBP16.27■□□□□ 0.2
SMG6-212ENST00000573153 F10P00742 488 aa16.27■□□□□ 0.2
SMG6-212ENST00000573153 LDLRP01130 860 aa16.27■□□□□ 0.2
SMG6-212ENST00000573153 FHP07954 510 aa16.27■□□□□ 0.2
SMG6-212ENST00000573153 GP1BBP13224 206 aa16.27■□□□□ 0.2
SMG6-212ENST00000573153 ICAM2P13598 275 aa16.27■□□□□ 0.2
SMG6-212ENST00000573153 NCF1P14598 390 aaPredicted RBP16.27■□□□□ 0.2
SMG6-212ENST00000573153 RAB8AP61006 207 aa16.27■□□□□ 0.2
SMG6-212ENST00000573153 SLBPQ14493 270 aaKnown RBP eCLIP16.27■□□□□ 0.2
SMG6-212ENST00000573153 ADPRMQ3LIE5 342 aa16.27■□□□□ 0.2
SMG6-212ENST00000573153 HIST2H2BCQ6DN03 193 aa16.27■□□□□ 0.2
SMG6-212ENST00000573153 ISCA2Q86U28 154 aa16.27■□□□□ 0.2
SMG6-212ENST00000573153 CA13Q8N1Q1 262 aa16.27■□□□□ 0.2
SMG6-212ENST00000573153 ST6GALNAC3Q8NDV1 305 aa16.27■□□□□ 0.2
SMG6-212ENST00000573153 TTLQ8NG68 377 aa16.27■□□□□ 0.2
SMG6-212ENST00000573153 STAG3L4Q8TBR4 150 aa16.27■□□□□ 0.2
SMG6-212ENST00000573153 FAR1Q8WVX9 515 aa16.27■□□□□ 0.2
SMG6-212ENST00000573153 TBC1D20Q96BZ9 403 aa16.27■□□□□ 0.2
SMG6-212ENST00000573153 QRFPRQ96P65 431 aa16.27■□□□□ 0.2
SMG6-212ENST00000573153 NMRAL1Q9HBL8 299 aa16.27■□□□□ 0.2
SMG6-212ENST00000573153 DNAJC11Q9NVH1 559 aa16.27■□□□□ 0.2
SMG6-212ENST00000573153 NINJ2Q9NZG7 142 aa16.27■□□□□ 0.2
SMG6-212ENST00000573153 MTRF1LQ9UGC7 380 aaKnown RBP16.27■□□□□ 0.2
SMG6-212ENST00000573153 ZNF490Q9ULM2 529 aaPredicted RBP16.27■□□□□ 0.2
SMG6-212ENST00000573153 ANKUB1A6NFN9 424 aa16.26■□□□□ 0.19
SMG6-212ENST00000573153 TGFBR3LH3BV60 316 aa16.26■□□□□ 0.19
SMG6-212ENST00000573153 STK16O75716 305 aa16.26■□□□□ 0.19
SMG6-212ENST00000573153 WISP2O76076 250 aa16.26■□□□□ 0.19
SMG6-212ENST00000573153 LTA4HP09960 611 aaKnown RBP16.26■□□□□ 0.19
SMG6-212ENST00000573153 CTAGE8P0CG41 777 aa16.26■□□□□ 0.19
SMG6-212ENST00000573153 MTHFD2P13995 350 aa16.26■□□□□ 0.19
SMG6-212ENST00000573153 ECHS1P30084 290 aa16.26■□□□□ 0.19
SMG6-212ENST00000573153 PHBP35232 272 aa16.26■□□□□ 0.19
SMG6-212ENST00000573153 HSPA7P48741 367 aa16.26■□□□□ 0.19
SMG6-212ENST00000573153 AGTR2P50052 363 aa16.26■□□□□ 0.19
SMG6-212ENST00000573153 BTG2P78543 158 aa16.26■□□□□ 0.19
SMG6-212ENST00000573153 PCDH1Q08174 1060 aa16.26■□□□□ 0.19
SMG6-212ENST00000573153 SLMAPQ14BN4 828 aa16.26■□□□□ 0.19
SMG6-212ENST00000573153 ABRAXAS2Q15018 415 aa16.26■□□□□ 0.19
SMG6-212ENST00000573153 SFT2D3Q587I9 215 aa16.26■□□□□ 0.19
SMG6-212ENST00000573153 PAPD4Q6PIY7 484 aaKnown RBP16.26■□□□□ 0.19
SMG6-212ENST00000573153 CTAGE4Q8IX94 777 aa16.26■□□□□ 0.19
SMG6-212ENST00000573153 CENPLQ8N0S6 344 aaPredicted RBP16.26■□□□□ 0.19
SMG6-212ENST00000573153 NFAM1Q8NET5 270 aaPredicted RBP16.26■□□□□ 0.19
SMG6-212ENST00000573153 SSC4DQ8WTU2 575 aa16.26■□□□□ 0.19
SMG6-212ENST00000573153 UBTD2Q8WUN7 234 aa16.26■□□□□ 0.19
SMG6-212ENST00000573153 METTL21AQ8WXB1 218 aa16.26■□□□□ 0.19
SMG6-212ENST00000573153 ZNF592Q92610 1267 aa16.26■□□□□ 0.19
SMG6-212ENST00000573153 MS4A6EQ96DS6 147 aa16.26■□□□□ 0.19
SMG6-212ENST00000573153 MMP25Q9NPA2 562 aa16.26■□□□□ 0.19
SMG6-212ENST00000573153 NECTIN3Q9NQS3 549 aa16.26■□□□□ 0.19
SMG6-212ENST00000573153 WWOXQ9NZC7 414 aa16.26■□□□□ 0.19
SMG6-212ENST00000573153 NUDT4Q9NZJ9 180 aa16.26■□□□□ 0.19
SMG6-212ENST00000573153 C19orf25Q9UFG5 118 aaPredicted RBP16.26■□□□□ 0.19
SMG6-212ENST00000573153 SPTBN1Q01082 2364 aaKnown RBP16.25■□□□□ 0.19
SMG6-212ENST00000573153 FAM227AF5H4B4 570 aa16.25■□□□□ 0.19
SMG6-212ENST00000573153 KERAO60938 352 aa16.25■□□□□ 0.19
SMG6-212ENST00000573153 H2AFYO75367 372 aaKnown RBP16.25■□□□□ 0.19
SMG6-212ENST00000573153 AGFG2O95081 481 aa16.25■□□□□ 0.19
SMG6-212ENST00000573153 HNF4AP41235 474 aa16.25■□□□□ 0.19
SMG6-212ENST00000573153 CASP2P42575 452 aa16.25■□□□□ 0.19
SMG6-212ENST00000573153 HNRNPFP52597 415 aaKnown RBP16.25■□□□□ 0.19
SMG6-212ENST00000573153 SLC26A5P58743 744 aa16.25■□□□□ 0.19
SMG6-212ENST00000573153 RUNX2Q13950 521 aa16.25■□□□□ 0.19
SMG6-212ENST00000573153 TBCCQ15814 346 aa16.25■□□□□ 0.19
SMG6-212ENST00000573153 BTBD16Q32M84 506 aa16.25■□□□□ 0.19
SMG6-212ENST00000573153 TOR1AIP1Q5JTV8 583 aa16.25■□□□□ 0.19
SMG6-212ENST00000573153 FCRLBQ6BAA4 426 aa16.25■□□□□ 0.19
SMG6-212ENST00000573153 TMIGD1Q6UXZ0 262 aa16.25■□□□□ 0.19
SMG6-212ENST00000573153 QSOX2Q6ZRP7 698 aa16.25■□□□□ 0.19
SMG6-212ENST00000573153 LRRC70Q7Z2Q7 622 aa16.25■□□□□ 0.19
SMG6-212ENST00000573153 TBC1D1Q86TI0 1168 aaPredicted RBP16.25■□□□□ 0.19
SMG6-212ENST00000573153 CRLF3Q8IUI8 442 aa16.25■□□□□ 0.19
SMG6-212ENST00000573153 SCUBE1Q8IWY4 988 aa16.25■□□□□ 0.19
SMG6-212ENST00000573153 KRT78Q8N1N4 520 aa16.25■□□□□ 0.19
SMG6-212ENST00000573153 TMEM52Q8NDY8 209 aa16.25■□□□□ 0.19
SMG6-212ENST00000573153 OR1N1Q8NGS0 311 aa16.25■□□□□ 0.19
SMG6-212ENST00000573153 RHEBL1Q8TAI7 183 aa16.25■□□□□ 0.19
SMG6-212ENST00000573153 M1APQ8TC57 530 aa16.25■□□□□ 0.19
SMG6-212ENST00000573153 ELP5Q8TE02 316 aa16.25■□□□□ 0.19
SMG6-212ENST00000573153 FMO2Q99518 471 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms