RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 VPS11Q9H270 941 aa12.29□□□□□ -0.44
CNOT1-220ENST00000569916 OPTCQ9UBM4 332 aa12.29□□□□□ -0.44
CNOT1-220ENST00000569916 ZNF490Q9ULM2 529 aaPredicted RBP12.29□□□□□ -0.44
CNOT1-220ENST00000569916 PLAAQ9Y263 795 aa12.29□□□□□ -0.44
CNOT1-220ENST00000569916 IKBKGQ9Y6K9 419 aa12.29□□□□□ -0.44
CNOT1-220ENST00000569916 SHANK1Q9Y566 2161 aa12.29□□□□□ -0.44
CNOT1-220ENST00000569916 IGHV3-20A0A0C4DH32 117 aa12.28□□□□□ -0.44
CNOT1-220ENST00000569916 TTLL8A6PVC2 850 aa12.28□□□□□ -0.44
CNOT1-220ENST00000569916 K7EPI3 171 aa12.28□□□□□ -0.44
CNOT1-220ENST00000569916 KLK8O60259 260 aa12.28□□□□□ -0.44
CNOT1-220ENST00000569916 CLEC3AO75596 197 aa12.28□□□□□ -0.44
CNOT1-220ENST00000569916 KRT38O76015 456 aa12.28□□□□□ -0.44
CNOT1-220ENST00000569916 ZIC2O95409 532 aaPredicted RBP12.28□□□□□ -0.44
CNOT1-220ENST00000569916 SERPINA7P05543 415 aa12.28□□□□□ -0.44
CNOT1-220ENST00000569916 FHP07954 510 aa12.28□□□□□ -0.44
CNOT1-220ENST00000569916 FAM153BP0C7A2 387 aa12.28□□□□□ -0.44
CNOT1-220ENST00000569916 SOX11P35716 441 aa12.28□□□□□ -0.44
CNOT1-220ENST00000569916 CASP2P42575 452 aa12.28□□□□□ -0.44
CNOT1-220ENST00000569916 IRF8Q02556 426 aa12.28□□□□□ -0.44
CNOT1-220ENST00000569916 PCDH1Q08174 1060 aa12.28□□□□□ -0.44
CNOT1-220ENST00000569916 CHIT1Q13231 466 aa12.28□□□□□ -0.44
CNOT1-220ENST00000569916 NAA30Q147X3 362 aaPredicted RBP12.28□□□□□ -0.44
CNOT1-220ENST00000569916 TBCCQ15814 346 aa12.28□□□□□ -0.44
CNOT1-220ENST00000569916 ADPRMQ3LIE5 342 aa12.28□□□□□ -0.44
CNOT1-220ENST00000569916 FAM153CQ494X1 144 aa12.28□□□□□ -0.44
CNOT1-220ENST00000569916 PRR30Q53SZ7 412 aaPredicted RBP12.28□□□□□ -0.44
CNOT1-220ENST00000569916 RIPOR1Q6ZS17 1223 aa12.28□□□□□ -0.44
CNOT1-220ENST00000569916 CPEB2Q7Z5Q1 589 aaKnown RBP12.28□□□□□ -0.44
CNOT1-220ENST00000569916 ANKRD37Q7Z713 158 aa12.28□□□□□ -0.44
CNOT1-220ENST00000569916 ZADH2Q8N4Q0 377 aa12.28□□□□□ -0.44
CNOT1-220ENST00000569916 PPP4R1Q8TF05 950 aa12.28□□□□□ -0.44
CNOT1-220ENST00000569916 CCT6BQ92526 530 aa12.28□□□□□ -0.44
CNOT1-220ENST00000569916 PSMF1Q92530 271 aa12.28□□□□□ -0.44
CNOT1-220ENST00000569916 TSLPQ969D9 159 aa12.28□□□□□ -0.44
CNOT1-220ENST00000569916 TBC1D20Q96BZ9 403 aa12.28□□□□□ -0.44
CNOT1-220ENST00000569916 MS4A6EQ96DS6 147 aa12.28□□□□□ -0.44
CNOT1-220ENST00000569916 WDR77Q9BQA1 342 aaPredicted RBP12.28□□□□□ -0.44
CNOT1-220ENST00000569916 TUBB6Q9BUF5 446 aa12.28□□□□□ -0.44
CNOT1-220ENST00000569916 TXLNGYQ9BZA5 131 aa12.28□□□□□ -0.44
CNOT1-220ENST00000569916 RHBGQ9H310 441 aa12.28□□□□□ -0.44
CNOT1-220ENST00000569916 CLMPQ9H6B4 373 aa12.28□□□□□ -0.44
CNOT1-220ENST00000569916 L2HGDHQ9H9P8 463 aa12.28□□□□□ -0.44
CNOT1-220ENST00000569916 CLK4Q9HAZ1 481 aaKnown RBP12.28□□□□□ -0.44
CNOT1-220ENST00000569916 ZNF358Q9NW07 568 aa12.28□□□□□ -0.44
CNOT1-220ENST00000569916 C19orf25Q9UFG5 118 aaPredicted RBP12.28□□□□□ -0.44
CNOT1-220ENST00000569916 B3GNT3Q9Y2A9 372 aa12.28□□□□□ -0.44
CNOT1-220ENST00000569916 CSAG2Q9Y5P2 127 aa12.28□□□□□ -0.44
CNOT1-220ENST00000569916 MYO18BQ8IUG5 2567 aa12.28□□□□□ -0.44
CNOT1-220ENST00000569916 A0A0G2JN53 185 aa12.27□□□□□ -0.45
CNOT1-220ENST00000569916 EXOC1LA0A1B0GW35 172 aa12.27□□□□□ -0.45
CNOT1-220ENST00000569916 LRIT2A6NDA9 550 aa12.27□□□□□ -0.45
CNOT1-220ENST00000569916 ANKDD1BA6NHY2 528 aa12.27□□□□□ -0.45
CNOT1-220ENST00000569916 MAGEB17A8MXT2 336 aa12.27□□□□□ -0.45
CNOT1-220ENST00000569916 TRIM49D1C9J1S8 452 aa12.27□□□□□ -0.45
CNOT1-220ENST00000569916 RIPK2O43353 540 aa12.27□□□□□ -0.45
CNOT1-220ENST00000569916 ERI3O43414 337 aaKnown RBP12.27□□□□□ -0.45
CNOT1-220ENST00000569916 WFS1O76024 890 aa12.27□□□□□ -0.45
CNOT1-220ENST00000569916 SEC24DO94855 1032 aaPredicted RBP12.27□□□□□ -0.45
CNOT1-220ENST00000569916 GFAPP14136 432 aa12.27□□□□□ -0.45
CNOT1-220ENST00000569916 JAK1P23458 1154 aa12.27□□□□□ -0.45
CNOT1-220ENST00000569916 CNTFP26441 200 aa12.27□□□□□ -0.45
CNOT1-220ENST00000569916 GCAP28676 217 aa12.27□□□□□ -0.45
CNOT1-220ENST00000569916 ALDH18A1P54886 795 aaKnown RBP12.27□□□□□ -0.45
CNOT1-220ENST00000569916 KCNC4Q03721 635 aa12.27□□□□□ -0.45
CNOT1-220ENST00000569916 MFAP5Q13361 173 aa12.27□□□□□ -0.45
CNOT1-220ENST00000569916 LAPTM5Q13571 262 aa12.27□□□□□ -0.45
CNOT1-220ENST00000569916 ABRAXAS2Q15018 415 aa12.27□□□□□ -0.45
CNOT1-220ENST00000569916 PFKFB4Q16877 469 aa12.27□□□□□ -0.45
CNOT1-220ENST00000569916 PLEKHN1Q494U1 663 aaPredicted RBP12.27□□□□□ -0.45
CNOT1-220ENST00000569916 PAGE2BQ5JRK9 111 aa12.27□□□□□ -0.45
CNOT1-220ENST00000569916 KLC3Q6P597 504 aa12.27□□□□□ -0.45
CNOT1-220ENST00000569916 Q6ZS92 163 aa12.27□□□□□ -0.45
CNOT1-220ENST00000569916 TRMT10CQ7L0Y3 403 aaKnown RBP12.27□□□□□ -0.45
CNOT1-220ENST00000569916 GSPT2Q8IYD1 628 aaKnown RBP12.27□□□□□ -0.45
CNOT1-220ENST00000569916 CA13Q8N1Q1 262 aa12.27□□□□□ -0.45
CNOT1-220ENST00000569916 PLPP5Q8NEB5 264 aa12.27□□□□□ -0.45
CNOT1-220ENST00000569916 CPT1CQ8TCG5 803 aa12.27□□□□□ -0.45
CNOT1-220ENST00000569916 BRIX1Q8TDN6 353 aaKnown RBP12.27□□□□□ -0.45
CNOT1-220ENST00000569916 QRFPRQ96P65 431 aa12.27□□□□□ -0.45
CNOT1-220ENST00000569916 EPS8L2Q9H6S3 715 aa12.27□□□□□ -0.45
CNOT1-220ENST00000569916 SLAMF7Q9NQ25 335 aa12.27□□□□□ -0.45
CNOT1-220ENST00000569916 LRRC14BA6NHZ5 514 aa12.26□□□□□ -0.45
CNOT1-220ENST00000569916 ITGAMP11215 1152 aa12.26□□□□□ -0.45
CNOT1-220ENST00000569916 RNH1P13489 461 aaKnown RBP12.26□□□□□ -0.45
CNOT1-220ENST00000569916 EPB42P16452 691 aa12.26□□□□□ -0.45
CNOT1-220ENST00000569916 BTN3A2P78410 334 aa12.26□□□□□ -0.45
CNOT1-220ENST00000569916 PCBP2Q15366 365 aaKnown RBP eCLIP12.26□□□□□ -0.459e-8■■■■□ 22.5
CNOT1-220ENST00000569916 INPP5JQ15735 1006 aaPredicted RBP12.26□□□□□ -0.45
CNOT1-220ENST00000569916 NSDHLQ15738 373 aa12.26□□□□□ -0.45
CNOT1-220ENST00000569916 SFT2D3Q587I9 215 aa12.26□□□□□ -0.45
CNOT1-220ENST00000569916 CRB2Q5IJ48 1285 aa12.26□□□□□ -0.45
CNOT1-220ENST00000569916 PLAG1Q6DJT9 500 aa12.26□□□□□ -0.45
CNOT1-220ENST00000569916 ISLR2Q6UXK2 745 aa12.26□□□□□ -0.45
CNOT1-220ENST00000569916 QSOX2Q6ZRP7 698 aa12.26□□□□□ -0.45
CNOT1-220ENST00000569916 LINC00696Q6ZRV3 163 aa12.26□□□□□ -0.45
CNOT1-220ENST00000569916 CUZD1Q86UP6 607 aa12.26□□□□□ -0.45
CNOT1-220ENST00000569916 LAS2Q8IYD9 372 aa12.26□□□□□ -0.45
CNOT1-220ENST00000569916 SIRT6Q8N6T7 355 aa12.26□□□□□ -0.45
CNOT1-220ENST00000569916 TEX9Q8N6V9 391 aa12.26□□□□□ -0.45
CNOT1-220ENST00000569916 OR2L5Q8NG80 312 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms