RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 SYNPO2LQ9H987 977 aa10.57□□□□□ -0.72
SF3B3-205ENST00000564899 FAM60AQ9NP50 221 aa10.57□□□□□ -0.72
SF3B3-205ENST00000564899 NOP53Q9NZM5 478 aaKnown RBP10.57□□□□□ -0.72
SF3B3-205ENST00000564899 ARMCX1Q9P291 453 aa10.57□□□□□ -0.72
SF3B3-205ENST00000564899 TMED5Q9Y3A6 229 aa10.57□□□□□ -0.72
SF3B3-205ENST00000564899 COPG1Q9Y678 874 aaKnown RBP10.57□□□□□ -0.72
SF3B3-205ENST00000564899 CAPN7Q9Y6W3 813 aa10.57□□□□□ -0.72
SF3B3-205ENST00000564899 RELNP78509 3460 aa10.56□□□□□ -0.72
SF3B3-205ENST00000564899 UBR5O95071 2799 aaPredicted RBP10.56□□□□□ -0.72
SF3B3-205ENST00000564899 FLNCQ14315 2725 aa10.56□□□□□ -0.72
SF3B3-205ENST00000564899 MAP3K7O43318 606 aa10.56□□□□□ -0.72
SF3B3-205ENST00000564899 MYO1DO94832 1006 aa10.56□□□□□ -0.72
SF3B3-205ENST00000564899 ZBTB11O95625 1053 aaPredicted RBP10.56□□□□□ -0.72
SF3B3-205ENST00000564899 TBX6O95947 436 aaPredicted RBP10.56□□□□□ -0.72
SF3B3-205ENST00000564899 GP1BAP07359 652 aa10.56□□□□□ -0.72
SF3B3-205ENST00000564899 SLC35G6P0C7Q6 338 aa10.56□□□□□ -0.72
SF3B3-205ENST00000564899 ACPPP15309 386 aa10.56□□□□□ -0.72
SF3B3-205ENST00000564899 ACP1P24666 158 aa10.56□□□□□ -0.72
SF3B3-205ENST00000564899 HNRNPH1P31943 449 aaKnown RBP10.56□□□□□ -0.72
SF3B3-205ENST00000564899 SEPHS1P49903 392 aa10.56□□□□□ -0.72
SF3B3-205ENST00000564899 ATP4BP51164 291 aa10.56□□□□□ -0.72
SF3B3-205ENST00000564899 RAP1GDS1P52306 607 aa10.56□□□□□ -0.72
SF3B3-205ENST00000564899 IRX1P78414 480 aaPredicted RBP10.56□□□□□ -0.72
SF3B3-205ENST00000564899 TLE3Q04726 772 aa10.56□□□□□ -0.72
SF3B3-205ENST00000564899 TBL3Q12788 808 aaKnown RBP10.56□□□□□ -0.72
SF3B3-205ENST00000564899 TARDBPQ13148 414 aaKnown RBP eCLIP10.56□□□□□ -0.72
SF3B3-205ENST00000564899 PWP1Q13610 501 aa10.56□□□□□ -0.72
SF3B3-205ENST00000564899 KIAA0040Q15053 153 aa10.56□□□□□ -0.72
SF3B3-205ENST00000564899 RPS6KA2Q15349 733 aa10.56□□□□□ -0.72
SF3B3-205ENST00000564899 CLPPQ16740 277 aaPredicted RBP10.56□□□□□ -0.72
SF3B3-205ENST00000564899 GSTA3Q16772 222 aa10.56□□□□□ -0.72
SF3B3-205ENST00000564899 TMEM35AQ53FP2 167 aa10.56□□□□□ -0.72
SF3B3-205ENST00000564899 ZC3H12BQ5HYM0 836 aaKnown RBP10.56□□□□□ -0.72
SF3B3-205ENST00000564899 TOR1AIP1Q5JTV8 583 aa10.56□□□□□ -0.72
SF3B3-205ENST00000564899 DEPDC1Q5TB30 811 aa10.56□□□□□ -0.72
SF3B3-205ENST00000564899 FRMPD2BQ6IN97 320 aa10.56□□□□□ -0.72
SF3B3-205ENST00000564899 C6orf89Q6UWU4 347 aa10.56□□□□□ -0.72
SF3B3-205ENST00000564899 PARP9Q8IXQ6 854 aa10.56□□□□□ -0.72
SF3B3-205ENST00000564899 METTL4Q8N3J2 472 aa10.56□□□□□ -0.72
SF3B3-205ENST00000564899 DNAJC22Q8N4W6 341 aa10.56□□□□□ -0.72
SF3B3-205ENST00000564899 C1orf52Q8N6N3 182 aaKnown RBP10.56□□□□□ -0.72
SF3B3-205ENST00000564899 CAMKVQ8NCB2 501 aa10.56□□□□□ -0.72
SF3B3-205ENST00000564899 NT5CQ8TCD5 201 aa10.56□□□□□ -0.72
SF3B3-205ENST00000564899 CHTF18Q8WVB6 975 aa10.56□□□□□ -0.72
SF3B3-205ENST00000564899 NXPE2Q96DL1 559 aa10.56□□□□□ -0.72
SF3B3-205ENST00000564899 F2RL3Q96RI0 385 aa10.56□□□□□ -0.72
SF3B3-205ENST00000564899 DPYSL5Q9BPU6 564 aa10.56□□□□□ -0.72
SF3B3-205ENST00000564899 MACROD1Q9BQ69 325 aa10.56□□□□□ -0.72
SF3B3-205ENST00000564899 EBPLQ9BY08 206 aa10.56□□□□□ -0.72
SF3B3-205ENST00000564899 PDE7BQ9NP56 450 aa10.56□□□□□ -0.72
SF3B3-205ENST00000564899 MRGBPQ9NV56 204 aa10.56□□□□□ -0.72
SF3B3-205ENST00000564899 ASIC5Q9NY37 505 aa10.56□□□□□ -0.72
SF3B3-205ENST00000564899 AHSPQ9NZD4 102 aa10.56□□□□□ -0.72
SF3B3-205ENST00000564899 RUVBL1Q9Y265 456 aaKnown RBP10.56□□□□□ -0.72
SF3B3-205ENST00000564899 GPR45Q9Y5Y3 372 aa10.56□□□□□ -0.72
SF3B3-205ENST00000564899 NBPF19A0A087WUL8 3843 aa10.56□□□□□ -0.72
SF3B3-205ENST00000564899 LOC105369274A0A096LPK9 316 aa10.55□□□□□ -0.72
SF3B3-205ENST00000564899 LOC102723532A0A0G2JNH3 316 aa10.55□□□□□ -0.72
SF3B3-205ENST00000564899 LRIT2A6NDA9 550 aa10.55□□□□□ -0.72
SF3B3-205ENST00000564899 A8MU76 341 aa10.55□□□□□ -0.72
SF3B3-205ENST00000564899 H0YGG7 62 aa10.55□□□□□ -0.72
SF3B3-205ENST00000564899 J3QKU1 62 aa10.55□□□□□ -0.72
SF3B3-205ENST00000564899 SLC22A2O15244 555 aa10.55□□□□□ -0.72
SF3B3-205ENST00000564899 TOX3O15405 576 aaPredicted RBP10.55□□□□□ -0.72
SF3B3-205ENST00000564899 P2RX6O15547 441 aa10.55□□□□□ -0.72
SF3B3-205ENST00000564899 PCDH7O60245 1069 aa10.55□□□□□ -0.72
SF3B3-205ENST00000564899 EIF2S1P05198 315 aaKnown RBP10.55□□□□□ -0.72
SF3B3-205ENST00000564899 G6PDP11413 515 aa10.55□□□□□ -0.72
SF3B3-205ENST00000564899 BCKDHAP12694 445 aa10.55□□□□□ -0.72
SF3B3-205ENST00000564899 PIK3R1P27986 724 aa10.55□□□□□ -0.72
SF3B3-205ENST00000564899 TIA1P31483 386 aaKnown RBP eCLIP10.55□□□□□ -0.72
SF3B3-205ENST00000564899 ACADVLP49748 655 aa10.55□□□□□ -0.72
SF3B3-205ENST00000564899 NME5P56597 212 aa10.55□□□□□ -0.72
SF3B3-205ENST00000564899 VSX2P58304 361 aaPredicted RBP10.55□□□□□ -0.72
SF3B3-205ENST00000564899 ARF3P61204 181 aaPredicted RBP10.55□□□□□ -0.72
SF3B3-205ENST00000564899 STXBP1P61764 594 aaKnown RBP10.55□□□□□ -0.72
SF3B3-205ENST00000564899 HSD11B2P80365 405 aa10.55□□□□□ -0.72
SF3B3-205ENST00000564899 HYAL2Q12891 473 aa10.55□□□□□ -0.72
SF3B3-205ENST00000564899 KLF10Q13118 480 aa10.55□□□□□ -0.72
SF3B3-205ENST00000564899 ZSCAN26Q16670 478 aa10.55□□□□□ -0.72
SF3B3-205ENST00000564899 ADPRMQ3LIE5 342 aa10.55□□□□□ -0.72
SF3B3-205ENST00000564899 PDCD4Q53EL6 469 aaKnown RBP10.55□□□□□ -0.72
SF3B3-205ENST00000564899 HES3Q5TGS1 186 aa10.55□□□□□ -0.72
SF3B3-205ENST00000564899 FAM91A1Q658Y4 838 aa10.55□□□□□ -0.72
SF3B3-205ENST00000564899 NOXRED1Q6NXP6 359 aa10.55□□□□□ -0.72
SF3B3-205ENST00000564899 CYP20A1Q6UW02 462 aa10.55□□□□□ -0.72
SF3B3-205ENST00000564899 TMPRSS9Q7Z410 1059 aa10.55□□□□□ -0.72
SF3B3-205ENST00000564899 COMMD6Q7Z4G1 85 aa10.55□□□□□ -0.72
SF3B3-205ENST00000564899 TMPRSS12Q86WS5 348 aa10.55□□□□□ -0.72
SF3B3-205ENST00000564899 KMT5CQ86Y97 462 aa10.55□□□□□ -0.72
SF3B3-205ENST00000564899 MCATQ8IVS2 390 aaKnown RBP10.55□□□□□ -0.72
SF3B3-205ENST00000564899 OR4N4Q8N0Y3 316 aa10.55□□□□□ -0.72
SF3B3-205ENST00000564899 MIER2Q8N344 545 aa10.55□□□□□ -0.72
SF3B3-205ENST00000564899 LIX1Q8N485 282 aa10.55□□□□□ -0.72
SF3B3-205ENST00000564899 ZNF655Q8N720 491 aaPredicted RBP10.55□□□□□ -0.72
SF3B3-205ENST00000564899 CSNK1A1LQ8N752 337 aa10.55□□□□□ -0.72
SF3B3-205ENST00000564899 OR4D9Q8NGE8 314 aa10.55□□□□□ -0.72
SF3B3-205ENST00000564899 GAL3ST3Q96A11 431 aa10.55□□□□□ -0.72
SF3B3-205ENST00000564899 RGMAQ96B86 450 aa10.55□□□□□ -0.72
SF3B3-205ENST00000564899 TM4SF19Q96DZ7 209 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms