RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 SLC6A16Q9GZN6 736 aa12.31□□□□□ -0.44
SPG7-209ENST00000564047 LRMDAQ9H2I8 198 aa12.31□□□□□ -0.44
SPG7-209ENST00000564047 OR51B5Q9H339 312 aa12.31□□□□□ -0.44
SPG7-209ENST00000564047 LRTM1Q9HBL6 345 aa12.31□□□□□ -0.44
SPG7-209ENST00000564047 ENAMQ9NRM1 1142 aa12.31□□□□□ -0.44
SPG7-209ENST00000564047 C1orf109Q9NX04 203 aa12.31□□□□□ -0.44
SPG7-209ENST00000564047 TOR4AQ9NXH8 423 aa12.31□□□□□ -0.44
SPG7-209ENST00000564047 KLK13Q9UKR3 277 aa12.31□□□□□ -0.44
SPG7-209ENST00000564047 TRIM33Q9UPN9 1127 aa12.31□□□□□ -0.44
SPG7-209ENST00000564047 LOC105369274A0A096LPK9 316 aa12.3□□□□□ -0.44
SPG7-209ENST00000564047 LOC102723532A0A0G2JNH3 316 aa12.3□□□□□ -0.44
SPG7-209ENST00000564047 ZSCAN9O15535 394 aaPredicted RBP12.3□□□□□ -0.44
SPG7-209ENST00000564047 HCRTR1O43613 425 aa12.3□□□□□ -0.44
SPG7-209ENST00000564047 SEC22BO75396 215 aa12.3□□□□□ -0.44
SPG7-209ENST00000564047 ZIC2O95409 532 aaPredicted RBP12.3□□□□□ -0.44
SPG7-209ENST00000564047 STXBP1P61764 594 aaKnown RBP12.3□□□□□ -0.44
SPG7-209ENST00000564047 ERVK-8P63133 956 aa12.3□□□□□ -0.44
SPG7-209ENST00000564047 EMX2Q04743 252 aa12.3□□□□□ -0.44
SPG7-209ENST00000564047 TBL3Q12788 808 aaKnown RBP12.3□□□□□ -0.44
SPG7-209ENST00000564047 HYAL2Q12891 473 aa12.3□□□□□ -0.44
SPG7-209ENST00000564047 MAD2L1Q13257 205 aaPredicted RBP12.3□□□□□ -0.44
SPG7-209ENST00000564047 KIAA0040Q15053 153 aa12.3□□□□□ -0.44
SPG7-209ENST00000564047 SNCBQ16143 134 aa12.3□□□□□ -0.44
SPG7-209ENST00000564047 SPIN4Q56A73 249 aa12.3□□□□□ -0.44
SPG7-209ENST00000564047 TCTE1Q5JU00 501 aa12.3□□□□□ -0.44
SPG7-209ENST00000564047 RBM44Q6ZP01 1051 aaKnown RBP12.3□□□□□ -0.44
SPG7-209ENST00000564047 SPATA19Q7Z5L4 167 aa12.3□□□□□ -0.44
SPG7-209ENST00000564047 ZFAND4Q86XD8 727 aa12.3□□□□□ -0.44
SPG7-209ENST00000564047 OR4N4Q8N0Y3 316 aa12.3□□□□□ -0.44
SPG7-209ENST00000564047 METTL4Q8N3J2 472 aa12.3□□□□□ -0.44
SPG7-209ENST00000564047 CSNK1A1LQ8N752 337 aa12.3□□□□□ -0.44
SPG7-209ENST00000564047 CHTF18Q8WVB6 975 aa12.3□□□□□ -0.44
SPG7-209ENST00000564047 F2RL3Q96RI0 385 aa12.3□□□□□ -0.44
SPG7-209ENST00000564047 NLNQ9BYT8 704 aa12.3□□□□□ -0.44
SPG7-209ENST00000564047 REXO4Q9GZR2 422 aaKnown RBP12.3□□□□□ -0.44
SPG7-209ENST00000564047 SIRT5Q9NXA8 310 aa12.3□□□□□ -0.44
SPG7-209ENST00000564047 AHSPQ9NZD4 102 aa12.3□□□□□ -0.44
SPG7-209ENST00000564047 HEY2Q9UBP5 337 aa12.3□□□□□ -0.44
SPG7-209ENST00000564047 TMED5Q9Y3A6 229 aa12.3□□□□□ -0.44
SPG7-209ENST00000564047 NAV2Q8IVL1 2488 aa12.3□□□□□ -0.44
SPG7-209ENST00000564047 ASXL3Q9C0F0 2248 aa12.29□□□□□ -0.44
SPG7-209ENST00000564047 PCM1Q15154 2024 aa12.29□□□□□ -0.44
SPG7-209ENST00000564047 URADA6NGE7 173 aa12.29□□□□□ -0.44
SPG7-209ENST00000564047 P2RX6O15547 441 aa12.29□□□□□ -0.44
SPG7-209ENST00000564047 DKK1O94907 266 aa12.29□□□□□ -0.44
SPG7-209ENST00000564047 ACPPP15309 386 aa12.29□□□□□ -0.44
SPG7-209ENST00000564047 CCKBRP32239 447 aa12.29□□□□□ -0.44
SPG7-209ENST00000564047 VSX2P58304 361 aaPredicted RBP12.29□□□□□ -0.44
SPG7-209ENST00000564047 IRX1P78414 480 aaPredicted RBP12.29□□□□□ -0.44
SPG7-209ENST00000564047 INSM1Q01101 510 aaPredicted RBP12.29□□□□□ -0.44
SPG7-209ENST00000564047 ACY1Q03154 408 aa12.29□□□□□ -0.44
SPG7-209ENST00000564047 TGM3Q08188 693 aa12.29□□□□□ -0.44
SPG7-209ENST00000564047 ACSM2AQ08AH3 577 aa12.29□□□□□ -0.44
SPG7-209ENST00000564047 PRTGQ2VWP7 1150 aa12.29□□□□□ -0.44
SPG7-209ENST00000564047 DEFB110Q30KQ9 67 aa12.29□□□□□ -0.44
SPG7-209ENST00000564047 RFTN2Q52LD8 501 aaPredicted RBP12.29□□□□□ -0.44
SPG7-209ENST00000564047 TOR1AIP1Q5JTV8 583 aa12.29□□□□□ -0.44
SPG7-209ENST00000564047 WASHC2DQ5SRD0 308 aa12.29□□□□□ -0.44
SPG7-209ENST00000564047 PHF19Q5T6S3 580 aa12.29□□□□□ -0.44
SPG7-209ENST00000564047 CDCP2Q5VXM1 449 aa12.29□□□□□ -0.44
SPG7-209ENST00000564047 ACSM2BQ68CK6 577 aa12.29□□□□□ -0.44
SPG7-209ENST00000564047 C19orf48Q6RUI8 117 aa12.29□□□□□ -0.44
SPG7-209ENST00000564047 FNDC5Q8NAU1 212 aa12.29□□□□□ -0.44
SPG7-209ENST00000564047 SRFBP1Q8NEF9 429 aaKnown RBP12.29□□□□□ -0.44
SPG7-209ENST00000564047 OR2L5Q8NG80 312 aa12.29□□□□□ -0.44
SPG7-209ENST00000564047 N4BP2L2Q92802 583 aaPredicted RBP12.29□□□□□ -0.44
SPG7-209ENST00000564047 GAL3ST3Q96A11 431 aa12.29□□□□□ -0.44
SPG7-209ENST00000564047 RGMAQ96B86 450 aa12.29□□□□□ -0.44
SPG7-209ENST00000564047 MS4A6EQ96DS6 147 aa12.29□□□□□ -0.44
SPG7-209ENST00000564047 C11orf24Q96F05 449 aaPredicted RBP12.29□□□□□ -0.44
SPG7-209ENST00000564047 APIPQ96GX9 242 aa12.29□□□□□ -0.44
SPG7-209ENST00000564047 FCRL1Q96LA6 429 aa12.29□□□□□ -0.44
SPG7-209ENST00000564047 MRPL1Q9BYD6 325 aaKnown RBP12.29□□□□□ -0.44
SPG7-209ENST00000564047 ASIC5Q9NY37 505 aa12.29□□□□□ -0.44
SPG7-209ENST00000564047 GIMAP2Q9UG22 337 aa12.29□□□□□ -0.44
SPG7-209ENST00000564047 RUVBL1Q9Y265 456 aaKnown RBP12.29□□□□□ -0.44
SPG7-209ENST00000564047 E9PBE3 544 aa12.28□□□□□ -0.44
SPG7-209ENST00000564047 TMX2-CTNND1H3BSU7 103 aa12.28□□□□□ -0.44
SPG7-209ENST00000564047 PLPP1O14494 284 aa12.28□□□□□ -0.44
SPG7-209ENST00000564047 UBDO15205 165 aa12.28□□□□□ -0.44
SPG7-209ENST00000564047 KLHL41O60662 606 aa12.28□□□□□ -0.44
SPG7-209ENST00000564047 CCDC22O60826 627 aa12.28□□□□□ -0.44
SPG7-209ENST00000564047 SH3BGRLO75368 114 aa12.28□□□□□ -0.44
SPG7-209ENST00000564047 MYO1DO94832 1006 aa12.28□□□□□ -0.44
SPG7-209ENST00000564047 STATHP02808 62 aa12.28□□□□□ -0.44
SPG7-209ENST00000564047 EIF2S1P05198 315 aaKnown RBP12.28□□□□□ -0.44
SPG7-209ENST00000564047 SMIM10L1P0DMW3 83 aa12.28□□□□□ -0.44
SPG7-209ENST00000564047 FOLR1P15328 257 aa12.28□□□□□ -0.44
SPG7-209ENST00000564047 PCSK2P16519 638 aa12.28□□□□□ -0.44
SPG7-209ENST00000564047 MAPK1P28482 360 aa12.28□□□□□ -0.44
SPG7-209ENST00000564047 CSTF2P33240 577 aaKnown RBP eCLIP12.28□□□□□ -0.44
SPG7-209ENST00000564047 TSFMP43897 325 aaKnown RBP12.28□□□□□ -0.44
SPG7-209ENST00000564047 RAP1GDS1P52306 607 aa12.28□□□□□ -0.44
SPG7-209ENST00000564047 PDX1P52945 283 aa12.28□□□□□ -0.44
SPG7-209ENST00000564047 EMP3P54852 163 aa12.28□□□□□ -0.44
SPG7-209ENST00000564047 RPL38P63173 70 aaKnown RBP12.28□□□□□ -0.44
SPG7-209ENST00000564047 KCNAB1Q14722 419 aa12.28□□□□□ -0.44
SPG7-209ENST00000564047 KRT72Q14CN4 511 aa12.28□□□□□ -0.44
SPG7-209ENST00000564047 HKDC1Q2TB90 917 aa12.28□□□□□ -0.44
SPG7-209ENST00000564047 CCDC157Q569K6 752 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms